RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 SYNJ2BPP57105 145 aa8.7□□□□□ -1.02
RFFL-205ENST00000415395 KHDC1LQ5JSQ8 128 aa8.7□□□□□ -1.02
RFFL-205ENST00000415395 NEGR1Q7Z3B1 354 aa8.7□□□□□ -1.02
RFFL-205ENST00000415395 CEND1Q8N111 149 aa8.7□□□□□ -1.02
RFFL-205ENST00000415395 RNF182Q8N6D2 247 aa8.7□□□□□ -1.02
RFFL-205ENST00000415395 C16orf92Q96LL3 132 aa8.7□□□□□ -1.02
RFFL-205ENST00000415395 LINC00477Q96M19 166 aa8.7□□□□□ -1.02
RFFL-205ENST00000415395 C20orf78Q9BR46 151 aa8.7□□□□□ -1.02
RFFL-205ENST00000415395 PEMTQ9UBM1 199 aa8.7□□□□□ -1.02
RFFL-205ENST00000415395 TSSC4Q9Y5U2 329 aaPredicted RBP8.7□□□□□ -1.02
RFFL-205ENST00000415395 HIVEP1P15822 2718 aa8.69□□□□□ -1.02
RFFL-205ENST00000415395 TRBV25-1A0A075B6N4 114 aa8.69□□□□□ -1.02
RFFL-205ENST00000415395 TRAV8-2A0A0B4J237 113 aa8.69□□□□□ -1.02
RFFL-205ENST00000415395 H7C1H1 209 aa8.69□□□□□ -1.02
RFFL-205ENST00000415395 SOCS3O14543 225 aa8.69□□□□□ -1.02
RFFL-205ENST00000415395 TCTAP57738 103 aa8.69□□□□□ -1.02
RFFL-205ENST00000415395 NRACQ8N912 160 aa8.69□□□□□ -1.02
RFFL-205ENST00000415395 OR11H1Q8NG94 326 aa8.69□□□□□ -1.02
RFFL-205ENST00000415395 OR10J6PQ8NGY7 276 aa8.69□□□□□ -1.02
RFFL-205ENST00000415395 TRAV21A0A0B4J279 112 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 PROK1P58294 105 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 GTSCR1Q86UQ5 136 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 ZNF575Q86XF7 245 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 SMIM2Q9BVW6 85 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 F8VRH5 84 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 M0R381 172 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 FHL3Q13643 280 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 C18orf65Q6ZTR6 163 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 DPH3P1Q9H4G8 78 aa8.68□□□□□ -1.02
RFFL-205ENST00000415395 MRPL35Q9NZE8 188 aaKnown RBP8.68□□□□□ -1.02
RFFL-205ENST00000415395 NF1P21359 2839 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 TRBV7-9A0A0J9YWB2 115 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 OR11H12B2RN74 326 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 CD28P10747 220 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 ID1P41134 155 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 ASIPP42127 132 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 FXYD2P54710 66 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 SLURP1P55000 103 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 RPL11P62913 178 aaKnown RBP8.67□□□□□ -1.02
RFFL-205ENST00000415395 DEFB136Q30KP8 78 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 OR11H2Q8NH07 326 aa8.67□□□□□ -1.02
RFFL-205ENST00000415395 FLNBO75369 2602 aaKnown RBP8.66□□□□□ -1.02
RFFL-205ENST00000415395 IGKV2D-26A0A0A0MRZ7 120 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 F8W1H4 67 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 S100A4P26447 101 aaKnown RBP8.66□□□□□ -1.02
RFFL-205ENST00000415395 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 NHP2Q9NX24 153 aaKnown RBP8.66□□□□□ -1.02
RFFL-205ENST00000415395 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 A6NJY4 79 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 H3BVH4 76 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
RFFL-205ENST00000415395 PAPPA-AS1Q5QFB9 102 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 DCANP1Q8TF63 244 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 TOMM6Q96B49 74 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 SCGB3A1Q96QR1 104 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 CITED2Q99967 270 aaPredicted RBP8.66□□□□□ -1.02
RFFL-205ENST00000415395 C11orf21Q9P2W6 132 aa8.66□□□□□ -1.02
RFFL-205ENST00000415395 CHTOPQ9Y3Y2 248 aaKnown RBP8.66□□□□□ -1.02
RFFL-205ENST00000415395 TRAV2A0A0B4J234 112 aa8.65□□□□□ -1.03
RFFL-205ENST00000415395 CCL24O00175 119 aa8.65□□□□□ -1.03
RFFL-205ENST00000415395 SAP30O75446 220 aa8.65□□□□□ -1.03
RFFL-205ENST00000415395 GAS8-AS1O95177 125 aa8.65□□□□□ -1.03
RFFL-205ENST00000415395 EDN2P20800 178 aa8.65□□□□□ -1.03
RFFL-205ENST00000415395 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.03
RFFL-205ENST00000415395 RAX2Q96IS3 184 aa8.65□□□□□ -1.03
RFFL-205ENST00000415395 NAA38Q9BRA0 125 aaKnown RBP8.65□□□□□ -1.03
RFFL-205ENST00000415395 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.03
RFFL-205ENST00000415395 FN1P02751 2386 aaKnown RBP8.64□□□□□ -1.03
RFFL-205ENST00000415395 E9PLD3 99 aa8.64□□□□□ -1.03
RFFL-205ENST00000415395 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
RFFL-205ENST00000415395 ZNF479Q96JC4 524 aa8.64□□□□□ -1.03
RFFL-205ENST00000415395 C20orf173Q96LM9 149 aa8.64□□□□□ -1.03
RFFL-205ENST00000415395 BAHCC1Q9P281 2608 aa8.64□□□□□ -1.03
RFFL-205ENST00000415395 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 IGLL5B9A064 214 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 K7EQG2 157 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 RPL24P83731 157 aaKnown RBP8.63□□□□□ -1.03
RFFL-205ENST00000415395 LYRM7Q5U5X0 104 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 PHLDA1Q8WV24 401 aaPredicted RBP8.63□□□□□ -1.03
RFFL-205ENST00000415395 CUBNO60494 3623 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 TRAV26-2A0A0B4J265 109 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 SCGB1A1P11684 91 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 HERVK_113P61574 105 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 SNRPD3P62318 126 aaKnown RBP8.63□□□□□ -1.03
RFFL-205ENST00000415395 RPL32P62910 135 aaKnown RBP8.63□□□□□ -1.03
RFFL-205ENST00000415395 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 FOXI2Q6ZQN5 318 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 NDUFA11Q86Y39 141 aa8.63□□□□□ -1.03
RFFL-205ENST00000415395 C11orf44Q8N8P7 122 aa8.62□□□□□ -1.03
RFFL-205ENST00000415395 DUX3Q96PT4 197 aa8.62□□□□□ -1.03
RFFL-205ENST00000415395 IGKV3-7A0A075B6H7 116 aa8.61□□□□□ -1.03
RFFL-205ENST00000415395 TRAV25A0A0B4J276 109 aa8.61□□□□□ -1.03
RFFL-205ENST00000415395 A0A1W2PRX2 142 aa8.61□□□□□ -1.03
RFFL-205ENST00000415395 RIPPLY3P57055 190 aa8.61□□□□□ -1.03
RFFL-205ENST00000415395 NEXN-AS1Q8NBZ9 246 aa8.61□□□□□ -1.03
RFFL-205ENST00000415395 DYNLRB2Q8TF09 96 aa8.61□□□□□ -1.03
RFFL-205ENST00000415395 SETXQ7Z333 2677 aaKnown RBP8.61□□□□□ -1.03
RFFL-205ENST00000415395 A0A1B0GWB2 263 aa8.6□□□□□ -1.03
RFFL-205ENST00000415395 ADARB2-AS1A8MUL3 147 aa8.6□□□□□ -1.03
RFFL-205ENST00000415395 K7ERJ3 54 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms