RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 HIGD1BQ9P298 99 aa10.36□□□□□ -0.75
NUB1-201ENST00000413040 MTURNQ8N3F0 131 aa10.36□□□□□ -0.75
NUB1-201ENST00000413040 TP53TG1Q9Y2A0 90 aa10.36□□□□□ -0.75
NUB1-201ENST00000413040 SFTA2Q6UW10 78 aa10.36□□□□□ -0.75
NUB1-201ENST00000413040 MDFICQ9P1T7 246 aa10.36□□□□□ -0.75
NUB1-201ENST00000413040 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
NUB1-201ENST00000413040 KLHL30-AS1Q8NEE0 82 aa10.35□□□□□ -0.75
NUB1-201ENST00000413040 DCANP1Q8TF63 244 aa10.35□□□□□ -0.75
NUB1-201ENST00000413040 KIR2DL4Q99706 377 aa10.35□□□□□ -0.75
NUB1-201ENST00000413040 ZNF815PA8K554 130 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 SNRPD3P62318 126 aaKnown RBP10.34□□□□□ -0.75
NUB1-201ENST00000413040 SRSF9Q13242 221 aaKnown RBP eCLIP10.34□□□□□ -0.75
NUB1-201ENST00000413040 SUMO4Q6EEV6 95 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 NEXN-AS1Q8NBZ9 246 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 KHDC1LQ5JSQ8 128 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 AMTNQ6UX39 209 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 C2CD3Q4AC94 2353 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 SDHAF1A6NFY7 115 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 PRB1P04280 392 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 SLC25A16P16260 332 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 TMEM170BQ5T4T1 132 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 ZNF479Q96JC4 524 aa10.34□□□□□ -0.75
NUB1-201ENST00000413040 MYMXA0A1B0GTQ4 84 aa10.33□□□□□ -0.76
NUB1-201ENST00000413040 C12orf74Q32Q52 190 aa10.33□□□□□ -0.76
NUB1-201ENST00000413040 HIST2H2BDQ6DRA6 164 aa10.33□□□□□ -0.76
NUB1-201ENST00000413040 BEX4Q9NWD9 120 aaPredicted RBP10.33□□□□□ -0.76
NUB1-201ENST00000413040 TRAV12-1A0A0B4J245 112 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 KLLNB2CW77 178 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 PPP1R17O96001 155 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 PSMB8P28062 276 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 FAM19A4Q96LR4 140 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 Q8N1Y9 231 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 RNF223E7ERA6 249 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 DEFB136Q30KP8 78 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 ZFP2Q6ZN57 461 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 TM2D2Q9BX73 214 aa10.32□□□□□ -0.76
NUB1-201ENST00000413040 K7EMT4 169 aa10.31□□□□□ -0.76
NUB1-201ENST00000413040 MED14OSP0DP75 135 aa10.31□□□□□ -0.76
NUB1-201ENST00000413040 IGHV4OR15-8A0A075B7B6 117 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 A0A087WW49 117 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 C11orf86A6NJI1 115 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 IGLL5B9A064 214 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 H3BMG7 143 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 VCYO14598 125 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 LINC01356Q8N9X3 169 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 DUX3Q96PT4 197 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 OPRPNQ99935 248 aaPredicted RBP10.3□□□□□ -0.76
NUB1-201ENST00000413040 PRRC2AP48634 2157 aaKnown RBP10.3□□□□□ -0.76
NUB1-201ENST00000413040 APOMO95445 188 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 LINC00315P59091 139 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 LGALS1P09382 135 aaKnown RBP10.3□□□□□ -0.76
NUB1-201ENST00000413040 CFHR3Q02985 330 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 ZNF876PQ49A33 203 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
NUB1-201ENST00000413040 IGHV3-64A0A075B6Q5 118 aa10.29□□□□□ -0.76
NUB1-201ENST00000413040 A0A0J9YX75 114 aa10.29□□□□□ -0.76
NUB1-201ENST00000413040 PRM2P04554 102 aa10.29□□□□□ -0.76
NUB1-201ENST00000413040 APRG1Q8IVJ8 170 aa10.29□□□□□ -0.76
NUB1-201ENST00000413040 PHLDA1Q8WV24 401 aaPredicted RBP10.29□□□□□ -0.76
NUB1-201ENST00000413040 KNCNA6PVL3 124 aa10.28□□□□□ -0.76
NUB1-201ENST00000413040 HOXD3P31249 432 aaPredicted RBP10.28□□□□□ -0.76
NUB1-201ENST00000413040 SYT8Q8NBV8 401 aa10.28□□□□□ -0.76
NUB1-201ENST00000413040 TRBV7-9A0A0J9YWB2 115 aa10.28□□□□□ -0.76
NUB1-201ENST00000413040 E9PLD3 99 aa10.28□□□□□ -0.76
NUB1-201ENST00000413040 IGHV1OR15-1A0A075B7D0 117 aa10.28□□□□□ -0.76
NUB1-201ENST00000413040 TEX48A0A1B0GUV7 120 aa10.28□□□□□ -0.76
NUB1-201ENST00000413040 BRI3O95415 125 aa10.28□□□□□ -0.76
NUB1-201ENST00000413040 CRYGDP07320 174 aa10.28□□□□□ -0.76
NUB1-201ENST00000413040 POLR2KP53803 58 aaKnown RBP10.28□□□□□ -0.76
NUB1-201ENST00000413040 HERVK_113P61574 105 aa10.28□□□□□ -0.76
NUB1-201ENST00000413040 IGHV3-16A0A0C4DH30 117 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 LOC107984156A0A0G2JMH3 177 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 WFDC2Q14508 124 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 PMVKQ15126 192 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 TCTEX1D4Q5JR98 221 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 ARL17AQ8IVW1 177 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 K7EQG2 157 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 TSHBP01222 138 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 C18orf65Q6ZTR6 163 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 MRPL16Q9NX20 251 aaKnown RBP10.27□□□□□ -0.77
NUB1-201ENST00000413040 CUBNO60494 3623 aa10.27□□□□□ -0.77
NUB1-201ENST00000413040 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 HOXA3O43365 443 aaPredicted RBP10.26□□□□□ -0.77
NUB1-201ENST00000413040 GATA3P23771 443 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 SLURP1P55000 103 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 DEFB131AP59861 70 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 TAL2Q16559 108 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 PGPEP1Q9NXJ5 209 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 TEX15Q9BXT5 2789 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 EPG5Q9HCE0 2579 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 ETDBQ3ZM63 59 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 SH2D6Q7Z4S9 175 aa10.26□□□□□ -0.77
NUB1-201ENST00000413040 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
NUB1-201ENST00000413040 SAMD13Q5VXD3 122 aa10.25□□□□□ -0.77
NUB1-201ENST00000413040 FOXI2Q6ZQN5 318 aa10.25□□□□□ -0.77
NUB1-201ENST00000413040 COX6B1P14854 86 aa10.25□□□□□ -0.77
NUB1-201ENST00000413040 IGIPA6NJ69 53 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms