RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 MED14OSP0DP75 135 aa13.06□□□□□ -0.32
CXXC1-202ENST00000412036 GTSCR1Q86UQ5 136 aa13.06□□□□□ -0.32
CXXC1-202ENST00000412036 C2orf88Q9BSF0 95 aa13.06□□□□□ -0.32
CXXC1-202ENST00000412036 NACAE9PAV3 2078 aa13.06□□□□□ -0.32
CXXC1-202ENST00000412036 LINC00315P59091 139 aa13.06□□□□□ -0.32
CXXC1-202ENST00000412036 OR10J3Q5JRS4 329 aa13.06□□□□□ -0.32
CXXC1-202ENST00000412036 MCRIP2Q9BUT9 160 aaKnown RBP13.06□□□□□ -0.32
CXXC1-202ENST00000412036 KIF25-AS1Q9Y6Z4 181 aa13.06□□□□□ -0.32
CXXC1-202ENST00000412036 CMC4P56277 68 aaPredicted RBP13.05□□□□□ -0.32
CXXC1-202ENST00000412036 G3V4G9 280 aa13.05□□□□□ -0.32
CXXC1-202ENST00000412036 TEX43Q6ZNM6 134 aa13.05□□□□□ -0.32
CXXC1-202ENST00000412036 Q8N976 141 aa13.05□□□□□ -0.32
CXXC1-202ENST00000412036 U3KQK5 164 aa13.05□□□□□ -0.32
CXXC1-202ENST00000412036 CACNG7P62955 275 aa13.04□□□□□ -0.32
CXXC1-202ENST00000412036 A0A087WWL8 130 aa13.04□□□□□ -0.32
CXXC1-202ENST00000412036 SNHG12Q9BXW3 62 aa13.04□□□□□ -0.32
CXXC1-202ENST00000412036 NPYP01303 97 aa13.03□□□□□ -0.32
CXXC1-202ENST00000412036 PLAC8L1A1L4L8 177 aa13.02□□□□□ -0.32
CXXC1-202ENST00000412036 FAM19A2Q8N3H0 131 aa13.02□□□□□ -0.32
CXXC1-202ENST00000412036 PMCHP20382 165 aa13.02□□□□□ -0.33
CXXC1-202ENST00000412036 NUTF2P61970 127 aaKnown RBP13.02□□□□□ -0.33
CXXC1-202ENST00000412036 TMEM208Q9BTX3 173 aa13.02□□□□□ -0.33
CXXC1-202ENST00000412036 AMTP48728 403 aa13.01□□□□□ -0.33
CXXC1-202ENST00000412036 KRTDAPP60985 99 aa13.01□□□□□ -0.33
CXXC1-202ENST00000412036 LBHQ53QV2 105 aaPredicted RBP13.01□□□□□ -0.33
CXXC1-202ENST00000412036 NIT1Q86X76 327 aa13.01□□□□□ -0.33
CXXC1-202ENST00000412036 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
CXXC1-202ENST00000412036 LINC00467Q9BRT7 94 aa13.01□□□□□ -0.33
CXXC1-202ENST00000412036 TRGV11A0A075B6L2 103 aa13.01□□□□□ -0.33
CXXC1-202ENST00000412036 ZNF705AQ6ZN79 300 aaPredicted RBP13.01□□□□□ -0.33
CXXC1-202ENST00000412036 PAM16Q9Y3D7 125 aa13.01□□□□□ -0.33
CXXC1-202ENST00000412036 ZNF876PQ49A33 203 aa13□□□□□ -0.33
CXXC1-202ENST00000412036 IL17DQ8TAD2 202 aa13□□□□□ -0.33
CXXC1-202ENST00000412036 PRELID3AQ96N28 172 aa13□□□□□ -0.33
CXXC1-202ENST00000412036 C20orf144Q9BQM9 153 aa13□□□□□ -0.33
CXXC1-202ENST00000412036 CSTL1Q9H114 145 aa13□□□□□ -0.33
CXXC1-202ENST00000412036 CRYGDP07320 174 aa13□□□□□ -0.33
CXXC1-202ENST00000412036 PMCHL1Q16048 86 aa13□□□□□ -0.33
CXXC1-202ENST00000412036 NRACQ8N912 160 aa13□□□□□ -0.33
CXXC1-202ENST00000412036 MRPL16Q9NX20 251 aaKnown RBP13□□□□□ -0.33
CXXC1-202ENST00000412036 IGHV4-30-4P0DP06 118 aa12.99□□□□□ -0.33
CXXC1-202ENST00000412036 CKS2P33552 79 aa12.99□□□□□ -0.33
CXXC1-202ENST00000412036 EGFEM1PQ0D2K5 195 aa12.99□□□□□ -0.33
CXXC1-202ENST00000412036 TENM3Q9P273 2699 aa12.99□□□□□ -0.33
CXXC1-202ENST00000412036 LOC389332A0A1B0GUA5 103 aa12.99□□□□□ -0.33
CXXC1-202ENST00000412036 ORMDL3Q8N138 153 aa12.99□□□□□ -0.33
CXXC1-202ENST00000412036 RPL39LQ96EH5 51 aaKnown RBP12.98□□□□□ -0.33
CXXC1-202ENST00000412036 Q9UF83 564 aa12.98□□□□□ -0.33
CXXC1-202ENST00000412036 MGPP08493 103 aa12.97□□□□□ -0.33
CXXC1-202ENST00000412036 IFI27P40305 119 aaPredicted RBP12.97□□□□□ -0.33
CXXC1-202ENST00000412036 FAM74A4Q5TZK3 123 aa12.97□□□□□ -0.33
CXXC1-202ENST00000412036 POM121L12Q8N7R1 296 aa12.97□□□□□ -0.33
CXXC1-202ENST00000412036 DPH3P1Q9H4G8 78 aa12.97□□□□□ -0.33
CXXC1-202ENST00000412036 IGHV3-73A0A0B4J1V6 119 aa12.97□□□□□ -0.33
CXXC1-202ENST00000412036 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
CXXC1-202ENST00000412036 RASL10AQ92737 203 aa12.97□□□□□ -0.33
CXXC1-202ENST00000412036 AP1S3Q96PC3 154 aa12.97□□□□□ -0.33
CXXC1-202ENST00000412036 VAMP8Q9BV40 100 aa12.97□□□□□ -0.33
CXXC1-202ENST00000412036 PRB2P02812 416 aaPredicted RBP12.96□□□□□ -0.33
CXXC1-202ENST00000412036 C3orf79P0CE67 100 aa12.96□□□□□ -0.33
CXXC1-202ENST00000412036 TNFRSF6BO95407 300 aa12.96□□□□□ -0.34
CXXC1-202ENST00000412036 ZNF415Q09FC8 603 aa12.96□□□□□ -0.34
CXXC1-202ENST00000412036 RNASEKQ6P5S7 137 aaKnown RBP12.96□□□□□ -0.34
CXXC1-202ENST00000412036 Q6ZSN1 163 aa12.96□□□□□ -0.34
CXXC1-202ENST00000412036 X6R8D5 127 aa12.96□□□□□ -0.34
CXXC1-202ENST00000412036 M0R143 59 aa12.95□□□□□ -0.34
CXXC1-202ENST00000412036 UFSP1Q6NVU6 142 aa12.95□□□□□ -0.34
CXXC1-202ENST00000412036 MIEN1Q9BRT3 115 aa12.95□□□□□ -0.34
CXXC1-202ENST00000412036 M0R2P5 195 aa12.95□□□□□ -0.34
CXXC1-202ENST00000412036 DEFB135Q30KP9 77 aa12.95□□□□□ -0.34
CXXC1-202ENST00000412036 SUMO4Q6EEV6 95 aa12.95□□□□□ -0.34
CXXC1-202ENST00000412036 Q6ZTI0 123 aa12.95□□□□□ -0.34
CXXC1-202ENST00000412036 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
CXXC1-202ENST00000412036 SAMD5Q5TGI4 173 aa12.94□□□□□ -0.34
CXXC1-202ENST00000412036 DEFB104AQ8WTQ1 72 aa12.94□□□□□ -0.34
CXXC1-202ENST00000412036 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
CXXC1-202ENST00000412036 GOLT1BQ9Y3E0 138 aa12.94□□□□□ -0.34
CXXC1-202ENST00000412036 NOP10Q9NPE3 64 aaKnown RBP12.93□□□□□ -0.34
CXXC1-202ENST00000412036 C1QTNF4Q9BXJ3 329 aa12.93□□□□□ -0.34
CXXC1-202ENST00000412036 IGLV2-18A0A075B6J9 118 aa12.92□□□□□ -0.34
CXXC1-202ENST00000412036 P0DMU3 169 aa12.92□□□□□ -0.34
CXXC1-202ENST00000412036 FAM231AP0DMU4 169 aa12.92□□□□□ -0.34
CXXC1-202ENST00000412036 FAM231CP0DMU5 169 aa12.92□□□□□ -0.34
CXXC1-202ENST00000412036 SMIM15Q7Z3B0 74 aa12.92□□□□□ -0.34
CXXC1-202ENST00000412036 A0A096LNJ9 63 aa12.92□□□□□ -0.34
CXXC1-202ENST00000412036 CFAP126Q5VTH2 177 aa12.92□□□□□ -0.34
CXXC1-202ENST00000412036 LINC00173Q6ZV60 143 aa12.92□□□□□ -0.34
CXXC1-202ENST00000412036 LINC00614P0C842 121 aa12.91□□□□□ -0.34
CXXC1-202ENST00000412036 SYT8Q8NBV8 401 aa12.91□□□□□ -0.34
CXXC1-202ENST00000412036 EMP1P54849 157 aa12.91□□□□□ -0.34
CXXC1-202ENST00000412036 NEGR1Q7Z3B1 354 aa12.91□□□□□ -0.34
CXXC1-202ENST00000412036 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
CXXC1-202ENST00000412036 IGHV1-24A0A0C4DH33 117 aa12.9□□□□□ -0.34
CXXC1-202ENST00000412036 DEFB4AO15263 64 aa12.9□□□□□ -0.34
CXXC1-202ENST00000412036 HSBP1O75506 76 aa12.9□□□□□ -0.34
CXXC1-202ENST00000412036 MAJINQ3KP22 176 aa12.9□□□□□ -0.34
CXXC1-202ENST00000412036 SPATA45Q537H7 98 aa12.9□□□□□ -0.34
CXXC1-202ENST00000412036 ATOH7Q8N100 152 aa12.9□□□□□ -0.34
CXXC1-202ENST00000412036 TCAPO15273 167 aa12.9□□□□□ -0.35
CXXC1-202ENST00000412036 PPBPP02775 128 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms