RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 SETD2Q9BYW2 2564 aaPredicted RBP8.42□□□□□ -1.06
ITGA6-203ENST00000409532 SONP18583 2426 aaKnown RBP8.42□□□□□ -1.06
ITGA6-203ENST00000409532 CRIP2P52943 208 aaPredicted RBP8.42□□□□□ -1.06
ITGA6-203ENST00000409532 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.06
ITGA6-203ENST00000409532 MDFICQ9P1T7 246 aa8.42□□□□□ -1.06
ITGA6-203ENST00000409532 LGALS1P09382 135 aaKnown RBP8.42□□□□□ -1.06
ITGA6-203ENST00000409532 SPINK13Q1W4C9 94 aa8.42□□□□□ -1.06
ITGA6-203ENST00000409532 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
ITGA6-203ENST00000409532 SH2D6Q7Z4S9 175 aa8.42□□□□□ -1.06
ITGA6-203ENST00000409532 OPRPNQ99935 248 aaPredicted RBP8.41□□□□□ -1.06
ITGA6-203ENST00000409532 TRAV12-1A0A0B4J245 112 aa8.41□□□□□ -1.06
ITGA6-203ENST00000409532 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
ITGA6-203ENST00000409532 ZNF56Q15929 161 aa8.41□□□□□ -1.06
ITGA6-203ENST00000409532 TMEM170BQ5T4T1 132 aa8.41□□□□□ -1.06
ITGA6-203ENST00000409532 FAM19A4Q96LR4 140 aa8.41□□□□□ -1.06
ITGA6-203ENST00000409532 MXRA5Q9NR99 2828 aa8.41□□□□□ -1.06
ITGA6-203ENST00000409532 EPG5Q9HCE0 2579 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 SDHAF1A6NFY7 115 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 APOMO95445 188 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 IGLV1-40P01703 118 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 SYNJ2BPP57105 145 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 LINC00315P59091 139 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 DEFB112Q30KQ8 113 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 HIST2H2BDQ6DRA6 164 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 DCANP1Q8TF63 244 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 TRBV7-3A0A075B6L6 115 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 E9PLD3 99 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 TSHBP01222 138 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 CRYGDP07320 174 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 ID1P41134 155 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 ATP6V0BQ99437 205 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 PRORYQ9H606 182 aa8.4□□□□□ -1.06
ITGA6-203ENST00000409532 KIF25-AS1Q9Y6Z4 181 aa8.4□□□□□ -1.07
ITGA6-203ENST00000409532 IGHV3-64A0A075B6Q5 118 aa8.39□□□□□ -1.07
ITGA6-203ENST00000409532 PRM2P04554 102 aa8.39□□□□□ -1.07
ITGA6-203ENST00000409532 FOXI2Q6ZQN5 318 aa8.39□□□□□ -1.07
ITGA6-203ENST00000409532 KIR2DL4Q99706 377 aa8.39□□□□□ -1.07
ITGA6-203ENST00000409532 IGHV3-73A0A0B4J1V6 119 aa8.39□□□□□ -1.07
ITGA6-203ENST00000409532 KLLNB2CW77 178 aa8.39□□□□□ -1.07
ITGA6-203ENST00000409532 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
ITGA6-203ENST00000409532 Q8N1Y9 231 aa8.38□□□□□ -1.07
ITGA6-203ENST00000409532 LOC107984156A0A0G2JMH3 177 aa8.38□□□□□ -1.07
ITGA6-203ENST00000409532 TGFAP01135 160 aa8.38□□□□□ -1.07
ITGA6-203ENST00000409532 ARL17AQ8IVW1 177 aa8.38□□□□□ -1.07
ITGA6-203ENST00000409532 MRPL16Q9NX20 251 aaKnown RBP8.38□□□□□ -1.07
ITGA6-203ENST00000409532 C2CD3Q4AC94 2353 aa8.38□□□□□ -1.07
ITGA6-203ENST00000409532 LINC01549A6NIU2 74 aa8.38□□□□□ -1.07
ITGA6-203ENST00000409532 H3BUA1 57 aa8.38□□□□□ -1.07
ITGA6-203ENST00000409532 HOXA3O43365 443 aaPredicted RBP8.38□□□□□ -1.07
ITGA6-203ENST00000409532 TEX15Q9BXT5 2789 aa8.38□□□□□ -1.07
ITGA6-203ENST00000409532 NAV2Q8IVL1 2488 aa8.37□□□□□ -1.07
ITGA6-203ENST00000409532 RRN3P1Q2M238 152 aa8.37□□□□□ -1.07
ITGA6-203ENST00000409532 B4DSR2 109 aa8.37□□□□□ -1.07
ITGA6-203ENST00000409532 ZNF462Q96JM2 2506 aa8.37□□□□□ -1.07
ITGA6-203ENST00000409532 POLR2KP53803 58 aaKnown RBP8.37□□□□□ -1.07
ITGA6-203ENST00000409532 TAL2Q16559 108 aa8.37□□□□□ -1.07
ITGA6-203ENST00000409532 IGLV4-69A0A075B6H9 119 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 VCYO14598 125 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 APRG1Q8IVJ8 170 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 GTSF1LQ9H1H1 148 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 PPP1R17O96001 155 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 MED14OSP0DP75 135 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 PSMB8P28062 276 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 DEFB136Q30KP8 78 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 IGIPA6NJ69 53 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 INSL3P51460 131 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 SNRPD3P62318 126 aaKnown RBP8.36□□□□□ -1.07
ITGA6-203ENST00000409532 PMVKQ15126 192 aa8.36□□□□□ -1.07
ITGA6-203ENST00000409532 MORN3Q6PF18 240 aaPredicted RBP8.36□□□□□ -1.07
ITGA6-203ENST00000409532 CCDC168Q8NDH2 2452 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 NDUFS8O00217 210 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 CFHR3Q02985 330 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 ZNF876PQ49A33 203 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 GAGE13Q4V321 117 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 ZNRF2Q8NHG8 242 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 IGHV3-16A0A0C4DH30 117 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 KNCNA6PVL3 124 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 DUX3Q96PT4 197 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 PRRC2AP48634 2157 aaKnown RBP8.35□□□□□ -1.07
ITGA6-203ENST00000409532 FBN2P35556 2912 aa8.35□□□□□ -1.07
ITGA6-203ENST00000409532 IGHV4OR15-8A0A075B7B6 117 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 A0A087WW49 117 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 A0A0J9YX75 114 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 P0DMU3 169 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 FAM231AP0DMU4 169 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 FAM231CP0DMU5 169 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 TSSC4Q9Y5U2 329 aaPredicted RBP8.34□□□□□ -1.07
ITGA6-203ENST00000409532 A0A1B0GWB2 263 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 PSMB2P49721 201 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 ZNF418Q8TF45 676 aaPredicted RBP8.34□□□□□ -1.07
ITGA6-203ENST00000409532 K7EMT4 169 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 PROK1P58294 105 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 HERVK_113P61574 105 aa8.34□□□□□ -1.07
ITGA6-203ENST00000409532 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.07
ITGA6-203ENST00000409532 BEX4Q9NWD9 120 aaPredicted RBP8.34□□□□□ -1.07
ITGA6-203ENST00000409532 NXPH4O95158 308 aa8.33□□□□□ -1.08
ITGA6-203ENST00000409532 COX6B1P14854 86 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms