RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 MRPL53Q96EL3 112 aaKnown RBP11.43□□□□□ -0.58
MCF2L-205ENST00000397017 ATP5LO75964 103 aa11.42□□□□□ -0.58
MCF2L-205ENST00000397017 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
MCF2L-205ENST00000397017 A0A1B0GXF2 115 aa11.42□□□□□ -0.58
MCF2L-205ENST00000397017 SDHAF1A6NFY7 115 aa11.42□□□□□ -0.58
MCF2L-205ENST00000397017 H7C1H1 209 aa11.42□□□□□ -0.58
MCF2L-205ENST00000397017 RNASE13Q5GAN3 156 aaKnown RBP11.42□□□□□ -0.58
MCF2L-205ENST00000397017 C4orf3Q8WVX3 66 aa11.42□□□□□ -0.58
MCF2L-205ENST00000397017 ZFAND2AQ8N6M9 145 aa11.42□□□□□ -0.58
MCF2L-205ENST00000397017 CYSLTR1Q9Y271 337 aa11.42□□□□□ -0.58
MCF2L-205ENST00000397017 COL5A1-AS1Q5SY13 56 aa11.41□□□□□ -0.58
MCF2L-205ENST00000397017 SETXQ7Z333 2677 aaKnown RBP11.41□□□□□ -0.58
MCF2L-205ENST00000397017 K7EQG2 157 aa11.41□□□□□ -0.58
MCF2L-205ENST00000397017 DEFB4AO15263 64 aa11.41□□□□□ -0.58
MCF2L-205ENST00000397017 MIEN1Q9BRT3 115 aa11.41□□□□□ -0.58
MCF2L-205ENST00000397017 UBE2L6O14933 153 aa11.41□□□□□ -0.58
MCF2L-205ENST00000397017 PRSS2P07478 247 aa11.4□□□□□ -0.58
MCF2L-205ENST00000397017 PET117Q6UWS5 81 aa11.4□□□□□ -0.58
MCF2L-205ENST00000397017 NOP10Q9NPE3 64 aaKnown RBP11.4□□□□□ -0.58
MCF2L-205ENST00000397017 A0A096LPF7 62 aa11.4□□□□□ -0.59
MCF2L-205ENST00000397017 ZC2HC1BQ5TFG8 222 aa11.4□□□□□ -0.59
MCF2L-205ENST00000397017 SPAG8Q99932 426 aaPredicted RBP11.4□□□□□ -0.59
MCF2L-205ENST00000397017 A0A0U1RRA0 63 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 IGLL1P15814 213 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 ORMDL2Q53FV1 153 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 C2orf66Q6UXQ4 117 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 DKK2Q9UBU2 259 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 FBN2P35556 2912 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 GAGE12JA6NER3 117 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 PPP1R17O96001 155 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 GAGE1Q13065 139 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 GAGE4Q13068 117 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 GAGE5Q13069 117 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 DEFB114Q30KQ6 69 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 GAGE13Q4V321 117 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 OR11H2Q8NH07 326 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 NAA38Q9BRA0 125 aaKnown RBP11.39□□□□□ -0.59
MCF2L-205ENST00000397017 MAP6D1Q9H9H5 199 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 LENEPQ9Y5L5 61 aa11.39□□□□□ -0.59
MCF2L-205ENST00000397017 H7C2G1 150 aa11.38□□□□□ -0.59
MCF2L-205ENST00000397017 HERVK_113P61574 105 aa11.38□□□□□ -0.59
MCF2L-205ENST00000397017 ADAMTSL5Q6ZMM2 481 aa11.38□□□□□ -0.59
MCF2L-205ENST00000397017 TP73-AS1Q9UF72 201 aa11.38□□□□□ -0.59
MCF2L-205ENST00000397017 TP53TG1Q9Y2A0 90 aa11.38□□□□□ -0.59
MCF2L-205ENST00000397017 SFTA2Q6UW10 78 aa11.38□□□□□ -0.59
MCF2L-205ENST00000397017 U3KQE9 123 aa11.38□□□□□ -0.59
MCF2L-205ENST00000397017 VCX2Q9H322 139 aa11.38□□□□□ -0.59
MCF2L-205ENST00000397017 AZU1P20160 251 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 KLF5Q13887 457 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-205ENST00000397017 ANKRD39Q53RE8 183 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 DEFB125Q8N687 156 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 DCANP1Q8TF63 244 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 COL6A5A8TX70 2615 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 DNLZQ5SXM8 178 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
MCF2L-205ENST00000397017 STAB1Q9NY15 2570 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 TMEM89A2RUT3 159 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 VCYO14598 125 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 CTRLP40313 264 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 DEFB121Q5J5C9 76 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 LAMTOR2Q9Y2Q5 125 aa11.37□□□□□ -0.59
MCF2L-205ENST00000397017 P0DMU3 169 aa11.36□□□□□ -0.59
MCF2L-205ENST00000397017 FAM231AP0DMU4 169 aa11.36□□□□□ -0.59
MCF2L-205ENST00000397017 FAM231CP0DMU5 169 aa11.36□□□□□ -0.59
MCF2L-205ENST00000397017 HIST1H4GQ99525 98 aa11.36□□□□□ -0.59
MCF2L-205ENST00000397017 CHTOPQ9Y3Y2 248 aaKnown RBP11.36□□□□□ -0.59
MCF2L-205ENST00000397017 DPM2O94777 84 aa11.36□□□□□ -0.59
MCF2L-205ENST00000397017 ZNRF2Q8NHG8 242 aa11.36□□□□□ -0.59
MCF2L-205ENST00000397017 IGKCP01834 107 aa11.36□□□□□ -0.59
MCF2L-205ENST00000397017 IGLC6P0CF74 106 aa11.36□□□□□ -0.59
MCF2L-205ENST00000397017 Q1RN00 199 aa11.36□□□□□ -0.59
MCF2L-205ENST00000397017 ZNF747Q9BV97 191 aa11.35□□□□□ -0.59
MCF2L-205ENST00000397017 TMEM86BQ8N661 226 aa11.35□□□□□ -0.59
MCF2L-205ENST00000397017 Q8N8P6 123 aa11.35□□□□□ -0.59
MCF2L-205ENST00000397017 TRBV6-1A0A0K0K1D8 114 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 TTTY13Q9BZ97 58 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 MRPL35Q9NZE8 188 aaKnown RBP11.34□□□□□ -0.59
MCF2L-205ENST00000397017 TOMM7Q9P0U1 55 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 H3BMM0 161 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 LINC00310P59036 64 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 MPV17L2Q567V2 206 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
MCF2L-205ENST00000397017 RPL39P62891 51 aaKnown RBP11.33□□□□□ -0.6
MCF2L-205ENST00000397017 NOTCH1P46531 2555 aa11.33□□□□□ -0.6
MCF2L-205ENST00000397017 RPL24P83731 157 aaKnown RBP11.33□□□□□ -0.6
MCF2L-205ENST00000397017 NBEAL2Q6ZNJ1 2754 aa11.33□□□□□ -0.6
MCF2L-205ENST00000397017 C12orf54Q6X4T0 127 aa11.33□□□□□ -0.6
MCF2L-205ENST00000397017 PROK1P58294 105 aa11.32□□□□□ -0.6
MCF2L-205ENST00000397017 HILS1P60008 231 aa11.32□□□□□ -0.6
MCF2L-205ENST00000397017 TRAV13-1A0A0B4J241 112 aa11.32□□□□□ -0.6
MCF2L-205ENST00000397017 CRIP2P52943 208 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-205ENST00000397017 GATD1Q8NB37 220 aa11.32□□□□□ -0.6
MCF2L-205ENST00000397017 A0A096LNT2 108 aa11.31□□□□□ -0.6
MCF2L-205ENST00000397017 LGALS3P17931 250 aaKnown RBP11.31□□□□□ -0.6
MCF2L-205ENST00000397017 C1QTNF4Q9BXJ3 329 aa11.31□□□□□ -0.6
MCF2L-205ENST00000397017 LGALS9O00182 355 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms