RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 NXPH4O95158 308 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 NDUFA7O95182 113 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 APELAP0DMC3 54 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 CKS2P33552 79 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 LEPP41159 167 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 EP300Q09472 2414 aaPredicted RBP4.05□□□□□ -1.76
VPS41-203ENST00000395969 BOD1L1Q8NFC6 3051 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 IGLV2-18A0A075B6J9 118 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 TRAV4A0A0B4J268 109 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 FABP5P3A8MUU1 101 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 HOXA3O43365 443 aaPredicted RBP4.05□□□□□ -1.76
VPS41-203ENST00000395969 ZNF688P0C7X2 276 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 UBE2D1P51668 147 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 ZFP2Q6ZN57 461 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 DEFB104AQ8WTQ1 72 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 MAP1LC3AQ9H492 121 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 ZNF702PQ9H963 129 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 NXT2Q9NPJ8 142 aaKnown RBP4.05□□□□□ -1.76
VPS41-203ENST00000395969 IGHV3-21A0A0B4J1V1 117 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 IGHV3-72A0A0B4J1Y9 119 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 TRAV40A0A0B4J280 105 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 TMEM262E9PQX1 116 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 CRLF1O75462 422 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 SCGB1C2P0DMR2 95 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 UBE2E2Q96LR5 201 aa4.05□□□□□ -1.76
VPS41-203ENST00000395969 CSDC2Q9Y534 153 aaKnown RBP4.05□□□□□ -1.76
VPS41-203ENST00000395969 A0A087WX48 190 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 SNCGO76070 127 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 AVPP01185 164 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 IL4P05112 153 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 IGLC6P0CF74 106 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 IGHV4-38-2P0DP08 117 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 NDUFV3P56181 108 aaKnown RBP4.04□□□□□ -1.76
VPS41-203ENST00000395969 Q6Q795 121 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 C8orf49Q96NF6 230 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 MRPL35Q9NZE8 188 aaKnown RBP4.04□□□□□ -1.76
VPS41-203ENST00000395969 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 MYMXA0A1B0GTQ4 84 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 PLNP26678 52 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 C15orf32Q32M92 178 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 SPANXA1Q9NS26 97 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 CUBNO60494 3623 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 COL6A6A6NMZ7 2263 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 ARHGAP32A7KAX9 2087 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 J3QKU1 62 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 SPRY2O43597 315 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 SH2D1AO60880 128 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 Q8N8P6 123 aa4.04□□□□□ -1.76
VPS41-203ENST00000395969 KLK5Q9Y337 293 aaPredicted RBP4.04□□□□□ -1.76
VPS41-203ENST00000395969 NCBP2LA6PVI3 153 aaKnown RBP4.03□□□□□ -1.76
VPS41-203ENST00000395969 H3BS24 57 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 CCL24O00175 119 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 GAS8-AS1O95177 125 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 ASIPP42127 132 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 EMP1P54849 157 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 PLGLAQ15195 96 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 CHCHD5Q9BSY4 110 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 KLK15Q9H2R5 256 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 TRAV12-1A0A0B4J245 112 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 LINC01549A6NIU2 74 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 WIPF1O43516 503 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 LGALS1P09382 135 aaKnown RBP4.03□□□□□ -1.76
VPS41-203ENST00000395969 CD7P09564 240 aa4.03□□□□□ -1.76
VPS41-203ENST00000395969 PTPRZ1P23471 2315 aaPredicted RBP4.03□□□□□ -1.77
VPS41-203ENST00000395969 OVOL1O14753 267 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 IFITM1P13164 125 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 DLX1P56177 255 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 LYRM7Q5U5X0 104 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 C4orf3Q8WVX3 66 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 LINC00477Q96M19 166 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 LINC01600Q96MT4 127 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 SORL1Q92673 2214 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 C2CD3Q4AC94 2353 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 IGHV7-4-1A0A0J9YVY3 117 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 A8MWV9 139 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 VCYO14598 125 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 TCL1BO95988 128 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 RNASE1P07998 156 aaKnown RBP4.02□□□□□ -1.77
VPS41-203ENST00000395969 LINC00694P0DN24 101 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 LYZP61626 148 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 ANKRD29Q8N6D5 301 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 PRR25Q96S07 402 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 METTL26Q96S19 204 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 ANKHD1Q8IWZ3 2542 aaKnown RBP4.02□□□□□ -1.77
VPS41-203ENST00000395969 USP17L23D6RBM5 183 aa4.02□□□□□ -1.77
VPS41-203ENST00000395969 KLLNB2CW77 178 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 F8VRH5 84 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 H7C1H1 209 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 DEFB112Q30KQ8 113 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 IL17RELQ6ZVW7 336 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 AAMDCQ9H7C9 122 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 MSRB1Q9NZV6 116 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 HIVEP3Q5T1R4 2406 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 CREBBPQ92793 2442 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 DOPEY1Q5JWR5 2465 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 SVEP1Q4LDE5 3571 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 M0R3E3 92 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 RS1O15537 224 aa4.01□□□□□ -1.77
VPS41-203ENST00000395969 VPREB1P12018 145 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms