RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 RBMY1FQ15415 496 aaKnown RBP14.09□□□□□ -0.15
LMNB1-202ENST00000395354 MDFICQ9P1T7 246 aa14.09□□□□□ -0.15
LMNB1-202ENST00000395354 LINC01546A6NGU7 62 aa14.09□□□□□ -0.15
LMNB1-202ENST00000395354 NUTF2P61970 127 aaKnown RBP14.09□□□□□ -0.15
LMNB1-202ENST00000395354 CDPF1Q6NVV7 123 aa14.09□□□□□ -0.15
LMNB1-202ENST00000395354 NXT2Q9NPJ8 142 aaKnown RBP14.09□□□□□ -0.15
LMNB1-202ENST00000395354 AGRNO00468 2067 aa14.08□□□□□ -0.16
LMNB1-202ENST00000395354 CBY3A6NI87 242 aa14.08□□□□□ -0.16
LMNB1-202ENST00000395354 C14orf178Q8N769 122 aaPredicted RBP14.08□□□□□ -0.16
LMNB1-202ENST00000395354 C19orf73Q9NVV2 129 aa14.08□□□□□ -0.16
LMNB1-202ENST00000395354 LOC389332A0A1B0GUA5 103 aa14.07□□□□□ -0.16
LMNB1-202ENST00000395354 SPRY2O43597 315 aa14.07□□□□□ -0.16
LMNB1-202ENST00000395354 KRTDAPP60985 99 aa14.07□□□□□ -0.16
LMNB1-202ENST00000395354 NRACQ8N912 160 aa14.07□□□□□ -0.16
LMNB1-202ENST00000395354 KIF25-AS1Q9Y6Z4 181 aa14.07□□□□□ -0.16
LMNB1-202ENST00000395354 PPP1R17O96001 155 aa14.06□□□□□ -0.16
LMNB1-202ENST00000395354 C3orf79P0CE67 100 aa14.06□□□□□ -0.16
LMNB1-202ENST00000395354 SMIM17P0DL12 118 aa14.06□□□□□ -0.16
LMNB1-202ENST00000395354 PTH2Q96A98 100 aa14.06□□□□□ -0.16
LMNB1-202ENST00000395354 GAS8-AS1O95177 125 aa14.05□□□□□ -0.16
LMNB1-202ENST00000395354 LEPROTL1O95214 131 aa14.05□□□□□ -0.16
LMNB1-202ENST00000395354 PRB2P02812 416 aaPredicted RBP14.05□□□□□ -0.16
LMNB1-202ENST00000395354 PIK3CD-AS1Q5SR53 167 aa14.05□□□□□ -0.16
LMNB1-202ENST00000395354 WFDC10AQ9H1F0 79 aa14.05□□□□□ -0.16
LMNB1-202ENST00000395354 HSPB8Q9UJY1 196 aa14.05□□□□□ -0.16
LMNB1-202ENST00000395354 PMCHL1Q16048 86 aa14.05□□□□□ -0.16
LMNB1-202ENST00000395354 Q8N8P6 123 aa14.05□□□□□ -0.16
LMNB1-202ENST00000395354 GATA1P15976 413 aaPredicted RBP14.04□□□□□ -0.16
LMNB1-202ENST00000395354 BTF3P20290 206 aaKnown RBP14.04□□□□□ -0.16
LMNB1-202ENST00000395354 LINC00315P59091 139 aa14.04□□□□□ -0.16
LMNB1-202ENST00000395354 LINC01587Q99440 93 aa14.04□□□□□ -0.16
LMNB1-202ENST00000395354 C20orf78Q9BR46 151 aa14.04□□□□□ -0.16
LMNB1-202ENST00000395354 ZNF415Q09FC8 603 aa14.03□□□□□ -0.16
LMNB1-202ENST00000395354 TRAV26-2A0A0B4J265 109 aa14.02□□□□□ -0.16
LMNB1-202ENST00000395354 PCP4L1A6NKN8 68 aa14.02□□□□□ -0.16
LMNB1-202ENST00000395354 MGPP08493 103 aa14.02□□□□□ -0.16
LMNB1-202ENST00000395354 Q8N976 141 aa14.02□□□□□ -0.16
LMNB1-202ENST00000395354 MUC4Q99102 2169 aa14.01□□□□□ -0.17
LMNB1-202ENST00000395354 IGLV2-18A0A075B6J9 118 aa14.01□□□□□ -0.17
LMNB1-202ENST00000395354 MORN3Q6PF18 240 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-202ENST00000395354 TEX43Q6ZNM6 134 aa14.01□□□□□ -0.17
LMNB1-202ENST00000395354 RASL10AQ92737 203 aa14.01□□□□□ -0.17
LMNB1-202ENST00000395354 TMEM70Q9BUB7 260 aa14.01□□□□□ -0.17
LMNB1-202ENST00000395354 XCL2Q9UBD3 114 aa14.01□□□□□ -0.17
LMNB1-202ENST00000395354 ZNF876PQ49A33 203 aa14□□□□□ -0.17
LMNB1-202ENST00000395354 SPXQ9BT56 116 aa14□□□□□ -0.17
LMNB1-202ENST00000395354 M0R2P5 195 aa14□□□□□ -0.17
LMNB1-202ENST00000395354 HBDP02042 147 aa14□□□□□ -0.17
LMNB1-202ENST00000395354 C1QTNF4Q9BXJ3 329 aa14□□□□□ -0.17
LMNB1-202ENST00000395354 A0A096LNJ9 63 aa13.99□□□□□ -0.17
LMNB1-202ENST00000395354 K7EIL1 84 aa13.99□□□□□ -0.17
LMNB1-202ENST00000395354 K7EMI3 77 aa13.99□□□□□ -0.17
LMNB1-202ENST00000395354 PKIAP61925 76 aa13.99□□□□□ -0.17
LMNB1-202ENST00000395354 C1orf158Q8N1D5 194 aa13.99□□□□□ -0.17
LMNB1-202ENST00000395354 NDUFAF3Q9BU61 184 aa13.99□□□□□ -0.17
LMNB1-202ENST00000395354 MAP1LC3CQ9BXW4 147 aa13.99□□□□□ -0.17
LMNB1-202ENST00000395354 JPT2Q9H910 190 aa13.99□□□□□ -0.17
LMNB1-202ENST00000395354 CRYGDP07320 174 aa13.98□□□□□ -0.17
LMNB1-202ENST00000395354 IGHV4-30-4P0DP06 118 aa13.98□□□□□ -0.17
LMNB1-202ENST00000395354 HTN1P15515 57 aa13.98□□□□□ -0.17
LMNB1-202ENST00000395354 FCER1GP30273 86 aa13.98□□□□□ -0.17
LMNB1-202ENST00000395354 SUMO2P61956 95 aaKnown RBP13.98□□□□□ -0.17
LMNB1-202ENST00000395354 RPL32P62910 135 aaKnown RBP13.98□□□□□ -0.17
LMNB1-202ENST00000395354 C11orf72Q8NBR9 251 aa13.98□□□□□ -0.17
LMNB1-202ENST00000395354 TMEM208Q9BTX3 173 aa13.98□□□□□ -0.17
LMNB1-202ENST00000395354 SMIM2Q9BVW6 85 aa13.98□□□□□ -0.17
LMNB1-202ENST00000395354 SYS1-DBNDD2H3BUS1 97 aa13.97□□□□□ -0.17
LMNB1-202ENST00000395354 PET117Q6UWS5 81 aa13.97□□□□□ -0.17
LMNB1-202ENST00000395354 A0A087WWL8 130 aa13.96□□□□□ -0.17
LMNB1-202ENST00000395354 TSTD3H0UI37 97 aa13.96□□□□□ -0.17
LMNB1-202ENST00000395354 SUMO4Q6EEV6 95 aa13.96□□□□□ -0.17
LMNB1-202ENST00000395354 LINC00173Q6ZV60 143 aa13.96□□□□□ -0.17
LMNB1-202ENST00000395354 SPATA12Q7Z6I5 190 aa13.96□□□□□ -0.17
LMNB1-202ENST00000395354 GOLT1BQ9Y3E0 138 aa13.96□□□□□ -0.17
LMNB1-202ENST00000395354 C20orf202A1L168 122 aa13.96□□□□□ -0.18
LMNB1-202ENST00000395354 A8MWV9 139 aa13.96□□□□□ -0.18
LMNB1-202ENST00000395354 DEFB121Q5J5C9 76 aa13.96□□□□□ -0.18
LMNB1-202ENST00000395354 ZNF664Q8N3J9 261 aa13.96□□□□□ -0.18
LMNB1-202ENST00000395354 A8MZ25 164 aa13.95□□□□□ -0.18
LMNB1-202ENST00000395354 GIG44P09565 113 aaPredicted RBP13.95□□□□□ -0.18
LMNB1-202ENST00000395354 RPL35AP18077 110 aaKnown RBP13.95□□□□□ -0.18
LMNB1-202ENST00000395354 LAGE3Q14657 143 aa13.95□□□□□ -0.18
LMNB1-202ENST00000395354 RPL39LQ96EH5 51 aaKnown RBP13.95□□□□□ -0.18
LMNB1-202ENST00000395354 DNAH3Q8TD57 4116 aa13.95□□□□□ -0.18
LMNB1-202ENST00000395354 TRBV6-5A0A0K0K1A5 114 aa13.94□□□□□ -0.18
LMNB1-202ENST00000395354 F5H697 171 aa13.94□□□□□ -0.18
LMNB1-202ENST00000395354 EDA2RQ9HAV5 297 aa13.94□□□□□ -0.18
LMNB1-202ENST00000395354 DEFA6Q01524 100 aa13.93□□□□□ -0.18
LMNB1-202ENST00000395354 FAM74A4Q5TZK3 123 aa13.93□□□□□ -0.18
LMNB1-202ENST00000395354 IL17DQ8TAD2 202 aa13.93□□□□□ -0.18
LMNB1-202ENST00000395354 VAMP8Q9BV40 100 aa13.93□□□□□ -0.18
LMNB1-202ENST00000395354 ST20Q9HBF5 79 aa13.93□□□□□ -0.18
LMNB1-202ENST00000395354 ZNF56Q15929 161 aa13.92□□□□□ -0.18
LMNB1-202ENST00000395354 ORMDL2Q53FV1 153 aa13.92□□□□□ -0.18
LMNB1-202ENST00000395354 KIR2DL5BA0A0G2JN68 375 aa13.92□□□□□ -0.18
LMNB1-202ENST00000395354 KIR2DL5BA0A0G2JPC4 375 aa13.92□□□□□ -0.18
LMNB1-202ENST00000395354 M0QY20 66 aa13.92□□□□□ -0.18
LMNB1-202ENST00000395354 KIR2DL5AQ8N109 375 aa13.92□□□□□ -0.18
LMNB1-202ENST00000395354 CSNK1G2-AS1Q8NCQ2 148 aa13.92□□□□□ -0.18
LMNB1-202ENST00000395354 RNASE8Q8TDE3 154 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms