RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 J3QQQ9 107 aa10.18□□□□□ -0.78
CCDC57-202ENST00000389641 IGHV3-33P01772 117 aa10.18□□□□□ -0.78
CCDC57-202ENST00000389641 ODF3Q96PU9 254 aa10.18□□□□□ -0.78
CCDC57-202ENST00000389641 CHCHD5Q9BSY4 110 aa10.18□□□□□ -0.78
CCDC57-202ENST00000389641 LGALS3P17931 250 aaKnown RBP10.17□□□□□ -0.78
CCDC57-202ENST00000389641 MUSTN1Q8IVN3 82 aa10.17□□□□□ -0.78
CCDC57-202ENST00000389641 G3V318 75 aa10.17□□□□□ -0.78
CCDC57-202ENST00000389641 C20orf173Q96LM9 149 aa10.17□□□□□ -0.78
CCDC57-202ENST00000389641 ZNF580Q9UK33 172 aa10.17□□□□□ -0.78
CCDC57-202ENST00000389641 F5H697 171 aa10.17□□□□□ -0.78
CCDC57-202ENST00000389641 F6UB75 175 aa10.17□□□□□ -0.78
CCDC57-202ENST00000389641 RNASE4P34096 147 aaKnown RBP10.17□□□□□ -0.78
CCDC57-202ENST00000389641 PMVKQ15126 192 aa10.17□□□□□ -0.78
CCDC57-202ENST00000389641 GPHB5Q86YW7 130 aa10.17□□□□□ -0.78
CCDC57-202ENST00000389641 VPS13CQ709C8 3753 aa10.17□□□□□ -0.78
CCDC57-202ENST00000389641 A0A087WWL8 130 aa10.16□□□□□ -0.78
CCDC57-202ENST00000389641 IGHV7-81A0A0B4J1V7 117 aa10.16□□□□□ -0.78
CCDC57-202ENST00000389641 NPC2P61916 151 aa10.16□□□□□ -0.78
CCDC57-202ENST00000389641 ASIPP42127 132 aa10.16□□□□□ -0.78
CCDC57-202ENST00000389641 ANKHD1Q8IWZ3 2542 aaKnown RBP10.16□□□□□ -0.78
CCDC57-202ENST00000389641 ZNF56Q15929 161 aa10.15□□□□□ -0.78
CCDC57-202ENST00000389641 LINC01620Q4KN68 170 aa10.15□□□□□ -0.78
CCDC57-202ENST00000389641 FAM57AQ8TBR7 257 aa10.15□□□□□ -0.78
CCDC57-202ENST00000389641 AMELXQ99217 191 aa10.15□□□□□ -0.78
CCDC57-202ENST00000389641 MUC4Q99102 2169 aa10.15□□□□□ -0.78
CCDC57-202ENST00000389641 IGIPA6NJ69 53 aa10.15□□□□□ -0.78
CCDC57-202ENST00000389641 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
CCDC57-202ENST00000389641 TMEM263Q8WUH6 116 aaKnown RBP10.15□□□□□ -0.78
CCDC57-202ENST00000389641 ZNF256Q9Y2P7 627 aaPredicted RBP10.15□□□□□ -0.78
CCDC57-202ENST00000389641 PRSS2P07478 247 aa10.15□□□□□ -0.79
CCDC57-202ENST00000389641 DUX3Q96PT4 197 aa10.15□□□□□ -0.79
CCDC57-202ENST00000389641 RPL11P62913 178 aaKnown RBP10.14□□□□□ -0.79
CCDC57-202ENST00000389641 Q6ZSV7 163 aa10.14□□□□□ -0.79
CCDC57-202ENST00000389641 CCDC140Q96MF4 163 aa10.14□□□□□ -0.79
CCDC57-202ENST00000389641 LINC00527Q9UJ94 153 aa10.14□□□□□ -0.79
CCDC57-202ENST00000389641 FOXC1Q12948 553 aa10.14□□□□□ -0.79
CCDC57-202ENST00000389641 PRR30Q53SZ7 412 aaPredicted RBP10.14□□□□□ -0.79
CCDC57-202ENST00000389641 METTL26Q96S19 204 aa10.14□□□□□ -0.79
CCDC57-202ENST00000389641 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
CCDC57-202ENST00000389641 H3BMM0 161 aa10.13□□□□□ -0.79
CCDC57-202ENST00000389641 FAM74A4Q5TZK3 123 aa10.13□□□□□ -0.79
CCDC57-202ENST00000389641 ZFAND2AQ8N6M9 145 aa10.13□□□□□ -0.79
CCDC57-202ENST00000389641 UBE2WQ96B02 151 aa10.13□□□□□ -0.79
CCDC57-202ENST00000389641 ATP6V0E1O15342 81 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 ID1P41134 155 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 ATXN8Q156A1 80 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 ITPR1Q14643 2758 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 C2orf82Q6UX34 121 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 CRYBG3Q68DQ2 2970 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 CENPEQ02224 2701 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 UTP20O75691 2785 aaKnown RBP10.12□□□□□ -0.79
CCDC57-202ENST00000389641 CENPVL3A0A0U1RRI6 287 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 TRIAP1O43715 76 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 VMO1Q7Z5L0 202 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 LINC01560Q8TB33 94 aa10.12□□□□□ -0.79
CCDC57-202ENST00000389641 HRNRQ86YZ3 2850 aaPredicted RBP10.11□□□□□ -0.79
CCDC57-202ENST00000389641 TRAV21A0A0B4J279 112 aa10.11□□□□□ -0.79
CCDC57-202ENST00000389641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.11□□□□□ -0.79
CCDC57-202ENST00000389641 RNASE3P12724 160 aaKnown RBP10.11□□□□□ -0.79
CCDC57-202ENST00000389641 CLEC2BQ92478 149 aa10.11□□□□□ -0.79
CCDC57-202ENST00000389641 PAPPA-AS1Q5QFB9 102 aa10.11□□□□□ -0.79
CCDC57-202ENST00000389641 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
CCDC57-202ENST00000389641 SORL1Q92673 2214 aa10.1□□□□□ -0.79
CCDC57-202ENST00000389641 SUMO4Q6EEV6 95 aa10.1□□□□□ -0.79
CCDC57-202ENST00000389641 Q8N9W7 124 aa10.1□□□□□ -0.79
CCDC57-202ENST00000389641 OR10J6PQ8NGY7 276 aa10.1□□□□□ -0.79
CCDC57-202ENST00000389641 ZNF876PQ49A33 203 aa10.09□□□□□ -0.79
CCDC57-202ENST00000389641 B9A039 149 aa10.09□□□□□ -0.79
CCDC57-202ENST00000389641 A0A0J9YXV3 536 aa10.09□□□□□ -0.79
CCDC57-202ENST00000389641 LGALS9O00182 355 aa10.09□□□□□ -0.79
CCDC57-202ENST00000389641 LY6G5BQ8NDX9 201 aa10.09□□□□□ -0.79
CCDC57-202ENST00000389641 SPXQ9BT56 116 aa10.09□□□□□ -0.79
CCDC57-202ENST00000389641 TRBV10-2A0A0K0K1G8 114 aa10.08□□□□□ -0.8
CCDC57-202ENST00000389641 ZNF22P17026 224 aaPredicted RBP10.08□□□□□ -0.8
CCDC57-202ENST00000389641 UBE2E1P51965 193 aa10.08□□□□□ -0.8
CCDC57-202ENST00000389641 ZFYVE26Q68DK2 2539 aa10.08□□□□□ -0.8
CCDC57-202ENST00000389641 H7C423 109 aa10.08□□□□□ -0.8
CCDC57-202ENST00000389641 CD3EP07766 207 aa10.08□□□□□ -0.8
CCDC57-202ENST00000389641 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
CCDC57-202ENST00000389641 LINC00315P59091 139 aa10.08□□□□□ -0.8
CCDC57-202ENST00000389641 CSMD2Q7Z408 3487 aa10.08□□□□□ -0.8
CCDC57-202ENST00000389641 ODF3BA8MYP8 253 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 VCYO14598 125 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 P0DMU3 169 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 FAM231AP0DMU4 169 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 FAM231CP0DMU5 169 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 VPREB3Q9UKI3 123 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 TNFRSF18Q9Y5U5 241 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 SPG11Q96JI7 2443 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 UNQ9165/PRO28630Q6UXU0 137 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 FAM110DQ8TAY7 271 aaPredicted RBP10.07□□□□□ -0.8
CCDC57-202ENST00000389641 IGHV1-69DA0A0B4J2H0 117 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 Q8N6K4 173 aa10.07□□□□□ -0.8
CCDC57-202ENST00000389641 PRRC2AP48634 2157 aaKnown RBP10.06□□□□□ -0.8
CCDC57-202ENST00000389641 CUBNO60494 3623 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 A0A0B4J2C4 111 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 FAM236AA0A1B0GUQ0 79 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 FAM236BA0A1B0GV22 79 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 A8MZ25 164 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms