RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CAPZBP47756 277 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 ARF6P62330 175 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 LINC00269Q8N2A0 174 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 OR5AK2Q8NH90 309 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 TRPM1Q7Z4N2 1603 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 RNF17Q9BXT8 1623 aaKnown RBP0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 ADGBQ8N7X0 1667 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 ROBO1Q9Y6N7 1651 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 CFTRP13569 1480 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 KDM5DQ9BY66 1539 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 DNMBPQ6XZF7 1577 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 TARBP1Q13395 1621 aaKnown RBP0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 ZNF831Q5JPB2 1677 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 KPNA4O00629 521 aaPredicted RBP0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 PIAS1O75925 651 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 CD3DP04234 171 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 GYPBP06028 91 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 FABP4P15090 132 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 GINS3Q9BRX5 216 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 UBR2Q8IWV8 1755 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 RTL9Q8NET4 1388 aa0.03□□□□□ -2.4
RNU6-39P-201ENST00000384344 ARHGAP31Q2M1Z3 1444 aa0.03□□□□□ -2.41
RNU6-39P-201ENST00000384344 EPRSP07814 1512 aaKnown RBP0.03□□□□□ -2.41
RNU6-39P-201ENST00000384344 TNRC6CQ9HCJ0 1690 aaKnown RBP0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 RGPD1P0DJD0 1748 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 NUP188Q5SRE5 1749 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 LOC285556D6RIA3 1793 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 C3orf85A0A1B0GTC6 90 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 BBIP1A8MTZ0 92 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 TRACP01848 142 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 EVI2AP22794 236 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 SNRPD3P62318 126 aaKnown RBP0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 RPL19P84098 196 aaKnown RBP0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 ZCCHC23Q6ZST2 131 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 C3orf62Q6ZUJ4 267 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 TMED4Q7Z7H5 227 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 LYG2Q86SG7 212 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 SS18L2Q9UHA2 77 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 STOML2Q9UJZ1 356 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 CD109Q6YHK3 1445 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 DNAH11Q96DT5 4516 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 USP32Q8NFA0 1604 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 ADCY10Q96PN6 1610 aa0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 SPHKAPQ2M3C7 1700 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 LY6G6CO95867 125 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 NDUFA6P56556 154 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 RBM3P98179 157 aaKnown RBP0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 GLYATL3Q5SZD4 288 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 PLEKHB2Q96CS7 222 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 CIB3Q96Q77 187 aaPredicted RBP0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 KIAA1107Q9UPP5 1409 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 VPS13DQ5THJ4 4388 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 MAGI1Q96QZ7 1491 aaPredicted RBP0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 MBD5Q9P267 1494 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 SHPRHQ149N8 1683 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 TSC2P49815 1807 aa0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 DNAH2Q9P225 4427 aa0□□□□□ -2.41
RNU6-39P-201ENST00000384344 ARL5CA6NH57 179 aa0□□□□□ -2.41
RNU6-39P-201ENST00000384344 PTPRDP23468 1912 aa0□□□□□ -2.41
RNU6-39P-201ENST00000384344 TCTAP57738 103 aa0□□□□□ -2.41
RNU6-39P-201ENST00000384344 POU6F1Q14863 301 aa0□□□□□ -2.41
RNU6-39P-201ENST00000384344 PLEKHH2Q8IVE3 1493 aa0□□□□□ -2.41
RNU6-39P-201ENST00000384344 ISOC1Q96CN7 298 aa0□□□□□ -2.41
RNU6-39P-201ENST00000384344 BORCS8Q96FH0 119 aa0□□□□□ -2.41
RNU6-39P-201ENST00000384344 MED11Q9P086 117 aa0□□□□□ -2.41
RNU6-39P-201ENST00000384344 SPAG17Q6Q759 2223 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 RGPD8O14715 1765 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 RGPD5Q99666 1765 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 CROCC2H7BZ55 1655 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 DSPPQ9NZW4 1301 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 A0A1W2PPB8 328 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 A0A1W2PRS3 328 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 KIR3DP1A8MWS1 328 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 TPT1P13693 172 aaKnown RBP-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 RPL37P61927 97 aaKnown RBP-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 IZUMO2Q6UXV1 221 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 ANGPTL5Q86XS5 388 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 TCTEX1D1Q8N7M0 179 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 TMEM229BQ8NBD8 167 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 IL20Q9NYY1 176 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 NUBP2Q9Y5Y2 271 aa-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-39P-201ENST00000384344 NRXN3Q9Y4C0 1643 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 DUOX2Q9NRD8 1548 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 RAPGEF2Q9Y4G8 1499 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 TRAPPC8Q9Y2L5 1435 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 DNAH8Q96JB1 4490 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 MFSD11O43934 449 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 SPINK1P00995 79 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 CSN2P05814 226 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 FABP2P12104 132 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 DNAJB13P59910 316 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 GNG3P63215 75 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 MRPS15P82914 257 aaKnown RBP-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 STX19Q8N4C7 294 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 CCL4L1Q8NHW4 92 aa-0.02□□□□□ -2.41
RNU6-39P-201ENST00000384344 DIRC1Q969H9 104 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms