RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 SS18Q15532 418 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 C16orf54Q6UWD8 224 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 LINC01548A6NM66 108 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 GDF5OSQ5U4N7 250 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 LAMTOR3Q9UHA4 124 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.23□□□□□ -0.29
SGCB-201ENST00000381431 IGKV2-29A2NJV5 120 aaPredicted RBP13.23□□□□□ -0.29
SGCB-201ENST00000381431 C10orf142B7Z368 130 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 LOXL1Q08397 574 aaPredicted RBP13.23□□□□□ -0.29
SGCB-201ENST00000381431 UNQ9165/PRO28630Q6UXU0 137 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 TMEM243Q9BU79 118 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 RNF114Q9Y508 228 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 F5H768 121 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 HIST1H4AP62805 103 aaKnown RBP13.23□□□□□ -0.29
SGCB-201ENST00000381431 F8W1H4 67 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 DAZAP2Q15038 168 aaPredicted RBP13.23□□□□□ -0.29
SGCB-201ENST00000381431 FOXI2Q6ZQN5 318 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 PRO3102Q9H379 93 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 LINC00574Q9H8X3 128 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 U3KQE9 123 aa13.23□□□□□ -0.29
SGCB-201ENST00000381431 TRBV12-3P01733 135 aa13.22□□□□□ -0.29
SGCB-201ENST00000381431 A0A0J9YXV3 536 aa13.21□□□□□ -0.29
SGCB-201ENST00000381431 ZNF80P51504 273 aaPredicted RBP13.21□□□□□ -0.29
SGCB-201ENST00000381431 TAL2Q16559 108 aa13.21□□□□□ -0.29
SGCB-201ENST00000381431 GAGE2AQ6NT46 116 aa13.21□□□□□ -0.29
SGCB-201ENST00000381431 SCRT2Q9NQ03 307 aa13.21□□□□□ -0.29
SGCB-201ENST00000381431 C2orf70A6NJV1 201 aa13.21□□□□□ -0.29
SGCB-201ENST00000381431 LGALS1P09382 135 aaKnown RBP13.21□□□□□ -0.29
SGCB-201ENST00000381431 RPL39P62891 51 aaKnown RBP13.21□□□□□ -0.29
SGCB-201ENST00000381431 SUMO4Q6EEV6 95 aa13.21□□□□□ -0.29
SGCB-201ENST00000381431 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
SGCB-201ENST00000381431 FXYD2P54710 66 aa13.21□□□□□ -0.3
SGCB-201ENST00000381431 PPDPFLQ8WWR9 84 aa13.21□□□□□ -0.3
SGCB-201ENST00000381431 SH2D6Q7Z4S9 175 aa13.2□□□□□ -0.3
SGCB-201ENST00000381431 TNRC6AQ8NDV7 1962 aaKnown RBP13.2□□□□□ -0.3
SGCB-201ENST00000381431 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
SGCB-201ENST00000381431 SIRPDQ9H106 197 aa13.19□□□□□ -0.3
SGCB-201ENST00000381431 PRRC2AP48634 2157 aaKnown RBP13.19□□□□□ -0.3
SGCB-201ENST00000381431 A0A1B0GXF2 115 aa13.19□□□□□ -0.3
SGCB-201ENST00000381431 CLPSL2Q6UWE3 100 aa13.19□□□□□ -0.3
SGCB-201ENST00000381431 CTRLP40313 264 aa13.19□□□□□ -0.3
SGCB-201ENST00000381431 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
SGCB-201ENST00000381431 MLST8Q9BVC4 326 aa13.19□□□□□ -0.3
SGCB-201ENST00000381431 TP73-AS1Q9UF72 201 aa13.19□□□□□ -0.3
SGCB-201ENST00000381431 GHRHP01286 108 aa13.18□□□□□ -0.3
SGCB-201ENST00000381431 DEFB121Q5J5C9 76 aa13.18□□□□□ -0.3
SGCB-201ENST00000381431 ZFP2Q6ZN57 461 aa13.18□□□□□ -0.3
SGCB-201ENST00000381431 Q8N1Y9 231 aa13.18□□□□□ -0.3
SGCB-201ENST00000381431 YPEL4Q96NS1 127 aa13.18□□□□□ -0.3
SGCB-201ENST00000381431 H3BMM0 161 aa13.18□□□□□ -0.3
SGCB-201ENST00000381431 DAD1P61803 113 aa13.18□□□□□ -0.3
SGCB-201ENST00000381431 NUP210LQ5VU65 1888 aa13.18□□□□□ -0.3
SGCB-201ENST00000381431 UBE2WQ96B02 151 aa13.18□□□□□ -0.3
SGCB-201ENST00000381431 POLQO75417 2590 aa13.17□□□□□ -0.3
SGCB-201ENST00000381431 MUC22E2RYF6 1773 aaPredicted RBP13.17□□□□□ -0.3
SGCB-201ENST00000381431 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
SGCB-201ENST00000381431 RNASE8Q8TDE3 154 aaKnown RBP13.17□□□□□ -0.3
SGCB-201ENST00000381431 TEX48A0A1B0GUV7 120 aa13.17□□□□□ -0.3
SGCB-201ENST00000381431 C9orf47Q6ZRZ4 202 aa13.17□□□□□ -0.3
SGCB-201ENST00000381431 ZNF462Q96JM2 2506 aa13.17□□□□□ -0.3
SGCB-201ENST00000381431 GAGE12HA6NDE8 117 aa13.16□□□□□ -0.3
SGCB-201ENST00000381431 RHOHQ15669 191 aa13.16□□□□□ -0.3
SGCB-201ENST00000381431 IGHV4OR15-8A0A075B7B6 117 aa13.15□□□□□ -0.3
SGCB-201ENST00000381431 A0A087WW49 117 aa13.15□□□□□ -0.3
SGCB-201ENST00000381431 CCL24O00175 119 aa13.15□□□□□ -0.3
SGCB-201ENST00000381431 TAX1BP3O14907 124 aa13.15□□□□□ -0.3
SGCB-201ENST00000381431 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.3
SGCB-201ENST00000381431 LMO4P61968 165 aa13.15□□□□□ -0.3
SGCB-201ENST00000381431 IGLL5B9A064 214 aa13.15□□□□□ -0.3
SGCB-201ENST00000381431 MBD6Q96DN6 1003 aa13.15□□□□□ -0.3
SGCB-201ENST00000381431 CFC1BP0CG36 223 aa13.14□□□□□ -0.31
SGCB-201ENST00000381431 CFC1P0CG37 223 aa13.14□□□□□ -0.31
SGCB-201ENST00000381431 ZNF48Q96MX3 618 aaPredicted RBP13.14□□□□□ -0.31
SGCB-201ENST00000381431 TP53TG3Q9ULZ0 132 aa13.14□□□□□ -0.31
SGCB-201ENST00000381431 IGHG2P01859 326 aa13.14□□□□□ -0.31
SGCB-201ENST00000381431 SRSF2Q01130 221 aaKnown RBP13.14□□□□□ -0.31
SGCB-201ENST00000381431 Q9H8V8 135 aa13.14□□□□□ -0.31
SGCB-201ENST00000381431 ODF1Q14990 250 aa13.14□□□□□ -0.31
SGCB-201ENST00000381431 CCDC140Q96MF4 163 aa13.14□□□□□ -0.31
SGCB-201ENST00000381431 UNC80Q8N2C7 3258 aa13.14□□□□□ -0.31
SGCB-201ENST00000381431 HERVK_113P63121 156 aa13.13□□□□□ -0.31
SGCB-201ENST00000381431 BOD1L2Q8IYS8 172 aa13.13□□□□□ -0.31
SGCB-201ENST00000381431 CEP192Q8TEP8 1941 aa13.13□□□□□ -0.31
SGCB-201ENST00000381431 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
SGCB-201ENST00000381431 CARD19Q96LW7 228 aa13.12□□□□□ -0.31
SGCB-201ENST00000381431 A4D1N5 150 aa13.12□□□□□ -0.31
SGCB-201ENST00000381431 ANGP03950 147 aaKnown RBP13.12□□□□□ -0.31
SGCB-201ENST00000381431 C5orf38Q86SI9 138 aa13.12□□□□□ -0.31
SGCB-201ENST00000381431 A0A0J9YY99 117 aa13.11□□□□□ -0.31
SGCB-201ENST00000381431 WFDC2Q14508 124 aa13.11□□□□□ -0.31
SGCB-201ENST00000381431 C3orf56Q8N813 242 aa13.11□□□□□ -0.31
SGCB-201ENST00000381431 XCL1P47992 114 aa13.11□□□□□ -0.31
SGCB-201ENST00000381431 XIRP2A4UGR9 3374 aa13.11□□□□□ -0.31
SGCB-201ENST00000381431 TRBV6-1A0A0K0K1D8 114 aa13.1□□□□□ -0.31
SGCB-201ENST00000381431 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
SGCB-201ENST00000381431 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
SGCB-201ENST00000381431 IGF1P05019 195 aa13.1□□□□□ -0.31
SGCB-201ENST00000381431 C5orf42Q9H799 3197 aa13.09□□□□□ -0.31
SGCB-201ENST00000381431 ODF3BA8MYP8 253 aa13.09□□□□□ -0.31
SGCB-201ENST00000381431 DEFB113Q30KQ7 82 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms