RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 SUMO2P61956 95 aaKnown RBP9.35□□□□□ -0.91
SF1-204ENST00000377390 TAL2Q16559 108 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 SMIM2Q9BVW6 85 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 VPS13CQ709C8 3753 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 OVOL3O00110 214 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 KHDC1LQ5JSQ8 128 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 FANCD2OSQ96PS1 177 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 BSNQ9UPA5 3926 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 LGALS3P17931 250 aaKnown RBP9.35□□□□□ -0.91
SF1-204ENST00000377390 RNASE4P34096 147 aaKnown RBP9.35□□□□□ -0.91
SF1-204ENST00000377390 CRIP2P52943 208 aaPredicted RBP9.35□□□□□ -0.91
SF1-204ENST00000377390 KLRB1Q12918 225 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 TMEM95Q3KNT9 176 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 ORMDL2Q53FV1 153 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 IGFL2Q6UWQ7 119 aa9.35□□□□□ -0.91
SF1-204ENST00000377390 TRBV6-1A0A0K0K1D8 114 aa9.34□□□□□ -0.91
SF1-204ENST00000377390 TEX49A0A1B0GTD5 131 aa9.34□□□□□ -0.91
SF1-204ENST00000377390 IGKV3-20P01619 116 aa9.34□□□□□ -0.91
SF1-204ENST00000377390 HTN1P15515 57 aa9.34□□□□□ -0.91
SF1-204ENST00000377390 SRD5A1P18405 259 aa9.34□□□□□ -0.91
SF1-204ENST00000377390 SHISA9B4DS77 424 aa9.34□□□□□ -0.91
SF1-204ENST00000377390 C11orf44Q8N8P7 122 aa9.34□□□□□ -0.91
SF1-204ENST00000377390 CRYGBP07316 175 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 CTSGP08311 255 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 METTL26Q96S19 204 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 ITPR2Q14571 2701 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 IGF1P05019 195 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 SMAD5-AS1Q9Y6J3 95 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 TRBV7-3A0A075B6L6 115 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 G3V318 75 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 DUSP14O95147 198 aaKnown RBP9.33□□□□□ -0.92
SF1-204ENST00000377390 GATD1Q8NB37 220 aa9.33□□□□□ -0.92
SF1-204ENST00000377390 A0A087WWL8 130 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 TRAV12-3A0A0B4J271 114 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 MRPS12O15235 138 aaKnown RBP9.32□□□□□ -0.92
SF1-204ENST00000377390 NUP37Q8NFH4 326 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 ZMAT4Q9H898 229 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 YAE1D1Q9NRH1 226 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 MSRB2Q9Y3D2 182 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 C19orf84I3L1E1 186 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 IGHV3-11P01762 117 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 PAX8Q06710 450 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 BPESC1Q9GZL8 116 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 ADARB2-AS1A8MUL3 147 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 IGFL3Q6UXB1 125 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 PPDPFQ9H3Y8 114 aa9.32□□□□□ -0.92
SF1-204ENST00000377390 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
SF1-204ENST00000377390 ZFHX3Q15911 3703 aa9.31□□□□□ -0.92
SF1-204ENST00000377390 RPL39P62891 51 aaKnown RBP9.31□□□□□ -0.92
SF1-204ENST00000377390 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
SF1-204ENST00000377390 VCX2Q9H322 139 aa9.31□□□□□ -0.92
SF1-204ENST00000377390 F6UB75 175 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 GNRH2O43555 120 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 ASIPP42127 132 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 C10orf126Q8N4M7 172 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 DUX3Q96PT4 197 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 PRO1854Q9UHT4 67 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 IGLV11-55A0A075B6I3 123 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 M0QXV9 152 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 NDUFA11Q86Y39 141 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 OR10J6PQ8NGY7 276 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 BAALCQ8WXS3 180 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 ADORA2A-AS1P86434 159 aa9.3□□□□□ -0.92
SF1-204ENST00000377390 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
SF1-204ENST00000377390 RS1O15537 224 aa9.29□□□□□ -0.92
SF1-204ENST00000377390 NHLRC4P0CG21 123 aaPredicted RBP9.29□□□□□ -0.92
SF1-204ENST00000377390 ATP5J2P56134 94 aa9.29□□□□□ -0.92
SF1-204ENST00000377390 C2orf82Q6UX34 121 aa9.29□□□□□ -0.92
SF1-204ENST00000377390 NRACQ8N912 160 aa9.29□□□□□ -0.92
SF1-204ENST00000377390 ATP6V0E2Q8NHE4 81 aa9.29□□□□□ -0.92
SF1-204ENST00000377390 Q6ZS46 218 aa9.29□□□□□ -0.92
SF1-204ENST00000377390 Q8N1Y9 231 aa9.29□□□□□ -0.92
SF1-204ENST00000377390 SLC50A1Q9BRV3 221 aa9.29□□□□□ -0.92
SF1-204ENST00000377390 A0A1W2PPR1 153 aa9.28□□□□□ -0.92
SF1-204ENST00000377390 A4D1N5 150 aa9.28□□□□□ -0.92
SF1-204ENST00000377390 RHODO00212 210 aa9.28□□□□□ -0.92
SF1-204ENST00000377390 C8orf31Q8N9H6 132 aa9.28□□□□□ -0.92
SF1-204ENST00000377390 DPH3P1Q9H4G8 78 aa9.28□□□□□ -0.92
SF1-204ENST00000377390 B9A039 149 aa9.28□□□□□ -0.92
SF1-204ENST00000377390 PIFOQ8TCI5 191 aa9.28□□□□□ -0.92
SF1-204ENST00000377390 OPRPNQ99935 248 aaPredicted RBP9.28□□□□□ -0.92
SF1-204ENST00000377390 JPT2Q9H910 190 aa9.28□□□□□ -0.92
SF1-204ENST00000377390 KAAG1Q9UBP8 84 aa9.28□□□□□ -0.92
SF1-204ENST00000377390 UBR5O95071 2799 aaPredicted RBP9.27□□□□□ -0.92
SF1-204ENST00000377390 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
SF1-204ENST00000377390 BUB3O43684 328 aa9.27□□□□□ -0.93
SF1-204ENST00000377390 IGHG4P01861 327 aa9.27□□□□□ -0.93
SF1-204ENST00000377390 RPL13AP40429 203 aaKnown RBP9.27□□□□□ -0.93
SF1-204ENST00000377390 FAM110AQ9BQ89 295 aa9.27□□□□□ -0.93
SF1-204ENST00000377390 RASL10AQ92737 203 aa9.27□□□□□ -0.93
SF1-204ENST00000377390 CFC1BP0CG36 223 aa9.26□□□□□ -0.93
SF1-204ENST00000377390 CFC1P0CG37 223 aa9.26□□□□□ -0.93
SF1-204ENST00000377390 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
SF1-204ENST00000377390 VMO1Q7Z5L0 202 aa9.26□□□□□ -0.93
SF1-204ENST00000377390 RNF5Q99942 180 aa9.26□□□□□ -0.93
SF1-204ENST00000377390 IGLV2-18A0A075B6J9 118 aa9.26□□□□□ -0.93
SF1-204ENST00000377390 ATRQ13535 2644 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms