RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 LGALS1P09382 135 aaKnown RBP13.58□□□□□ -0.24
SF1-203ENST00000377387 PLEKHB2Q96CS7 222 aa13.58□□□□□ -0.24
SF1-203ENST00000377387 FAM19A4Q96LR4 140 aa13.58□□□□□ -0.24
SF1-203ENST00000377387 DUX5Q96PT3 197 aa13.58□□□□□ -0.24
SF1-203ENST00000377387 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.24
SF1-203ENST00000377387 ZNF256Q9Y2P7 627 aaPredicted RBP13.57□□□□□ -0.24
SF1-203ENST00000377387 E9PLD3 99 aa13.57□□□□□ -0.24
SF1-203ENST00000377387 MSMBP08118 114 aa13.57□□□□□ -0.24
SF1-203ENST00000377387 SUMO4Q6EEV6 95 aa13.57□□□□□ -0.24
SF1-203ENST00000377387 SH2D6Q7Z4S9 175 aa13.57□□□□□ -0.24
SF1-203ENST00000377387 SETD2Q9BYW2 2564 aaPredicted RBP13.56□□□□□ -0.24
SF1-203ENST00000377387 TRBV7-3A0A075B6L6 115 aa13.56□□□□□ -0.24
SF1-203ENST00000377387 PRB1P04280 392 aa13.56□□□□□ -0.24
SF1-203ENST00000377387 SRSF9Q13242 221 aaKnown RBP eCLIP13.56□□□□□ -0.24
SF1-203ENST00000377387 FOXI2Q6ZQN5 318 aa13.56□□□□□ -0.24
SF1-203ENST00000377387 NAV2Q8IVL1 2488 aa13.56□□□□□ -0.24
SF1-203ENST00000377387 TEX15Q9BXT5 2789 aa13.55□□□□□ -0.24
SF1-203ENST00000377387 LINC00315P59091 139 aa13.55□□□□□ -0.24
SF1-203ENST00000377387 MDFICQ9P1T7 246 aa13.55□□□□□ -0.24
SF1-203ENST00000377387 C11orf86A6NJI1 115 aa13.55□□□□□ -0.24
SF1-203ENST00000377387 IGHV4-59P01825 116 aa13.55□□□□□ -0.24
SF1-203ENST00000377387 CRYGDP07320 174 aa13.55□□□□□ -0.24
SF1-203ENST00000377387 TSHBP01222 138 aa13.54□□□□□ -0.24
SF1-203ENST00000377387 IGLV1-40P01703 118 aa13.54□□□□□ -0.24
SF1-203ENST00000377387 HTN1P15515 57 aa13.54□□□□□ -0.24
SF1-203ENST00000377387 KIF25-AS1Q9Y6Z4 181 aa13.54□□□□□ -0.24
SF1-203ENST00000377387 ID1P41134 155 aa13.54□□□□□ -0.24
SF1-203ENST00000377387 ETDBQ3ZM63 59 aa13.54□□□□□ -0.24
SF1-203ENST00000377387 ZFP2Q6ZN57 461 aa13.54□□□□□ -0.24
SF1-203ENST00000377387 DCANP1Q8TF63 244 aa13.54□□□□□ -0.24
SF1-203ENST00000377387 SDHAF1A6NFY7 115 aa13.53□□□□□ -0.24
SF1-203ENST00000377387 TAL2Q16559 108 aa13.53□□□□□ -0.24
SF1-203ENST00000377387 OPRPNQ99935 248 aaPredicted RBP13.53□□□□□ -0.24
SF1-203ENST00000377387 NOTCH3Q9UM47 2321 aa13.53□□□□□ -0.24
SF1-203ENST00000377387 KLLNB2CW77 178 aa13.53□□□□□ -0.24
SF1-203ENST00000377387 H3BUA1 57 aa13.53□□□□□ -0.24
SF1-203ENST00000377387 SPINK13Q1W4C9 94 aa13.53□□□□□ -0.24
SF1-203ENST00000377387 TMEM170BQ5T4T1 132 aa13.53□□□□□ -0.24
SF1-203ENST00000377387 HOXA3O43365 443 aaPredicted RBP13.52□□□□□ -0.24
SF1-203ENST00000377387 ZNF56Q15929 161 aa13.52□□□□□ -0.24
SF1-203ENST00000377387 CCDC168Q8NDH2 2452 aa13.52□□□□□ -0.25
SF1-203ENST00000377387 APOMO95445 188 aa13.52□□□□□ -0.25
SF1-203ENST00000377387 KIR2DL4Q99706 377 aa13.52□□□□□ -0.25
SF1-203ENST00000377387 PGPEP1Q9NXJ5 209 aa13.52□□□□□ -0.25
SF1-203ENST00000377387 ZNF469Q96JG9 3925 aaPredicted RBP13.51□□□□□ -0.25
SF1-203ENST00000377387 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
SF1-203ENST00000377387 RRN3P1Q2M238 152 aa13.51□□□□□ -0.25
SF1-203ENST00000377387 APRG1Q8IVJ8 170 aa13.51□□□□□ -0.25
SF1-203ENST00000377387 DEFB112Q30KQ8 113 aa13.51□□□□□ -0.25
SF1-203ENST00000377387 MRPL16Q9NX20 251 aaKnown RBP13.51□□□□□ -0.25
SF1-203ENST00000377387 SYNJ2BPP57105 145 aa13.5□□□□□ -0.25
SF1-203ENST00000377387 PPP1R17O96001 155 aa13.5□□□□□ -0.25
SF1-203ENST00000377387 LINC01549A6NIU2 74 aa13.5□□□□□ -0.25
SF1-203ENST00000377387 POLR2KP53803 58 aaKnown RBP13.5□□□□□ -0.25
SF1-203ENST00000377387 Q8N1Y9 231 aa13.5□□□□□ -0.25
SF1-203ENST00000377387 IGLV4-69A0A075B6H9 119 aa13.49□□□□□ -0.25
SF1-203ENST00000377387 LOC107984156A0A0G2JMH3 177 aa13.49□□□□□ -0.25
SF1-203ENST00000377387 VCYO14598 125 aa13.49□□□□□ -0.25
SF1-203ENST00000377387 ARL17AQ8IVW1 177 aa13.49□□□□□ -0.25
SF1-203ENST00000377387 IGHV3-64A0A075B6Q5 118 aa13.49□□□□□ -0.25
SF1-203ENST00000377387 MORN3Q6PF18 240 aaPredicted RBP13.49□□□□□ -0.25
SF1-203ENST00000377387 NBPF19A0A087WUL8 3843 aa13.48□□□□□ -0.25
SF1-203ENST00000377387 IGIPA6NJ69 53 aa13.48□□□□□ -0.25
SF1-203ENST00000377387 IGHV3-73A0A0B4J1V6 119 aa13.48□□□□□ -0.25
SF1-203ENST00000377387 PMVKQ15126 192 aa13.48□□□□□ -0.25
SF1-203ENST00000377387 GAGE13Q4V321 117 aa13.48□□□□□ -0.25
SF1-203ENST00000377387 GTSF1LQ9H1H1 148 aa13.48□□□□□ -0.25
SF1-203ENST00000377387 NF1P21359 2839 aa13.47□□□□□ -0.25
SF1-203ENST00000377387 CFHR3Q02985 330 aa13.47□□□□□ -0.25
SF1-203ENST00000377387 NACAE9PAV3 2078 aa13.47□□□□□ -0.25
SF1-203ENST00000377387 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
SF1-203ENST00000377387 A0A087WW49 117 aa13.47□□□□□ -0.25
SF1-203ENST00000377387 B4DSR2 109 aa13.47□□□□□ -0.25
SF1-203ENST00000377387 PRM2P04554 102 aa13.47□□□□□ -0.25
SF1-203ENST00000377387 PSMB8P28062 276 aa13.47□□□□□ -0.25
SF1-203ENST00000377387 NXPH4O95158 308 aa13.46□□□□□ -0.25
SF1-203ENST00000377387 INSL3P51460 131 aa13.46□□□□□ -0.25
SF1-203ENST00000377387 TSPEAR-AS2P59090 65 aa13.46□□□□□ -0.25
SF1-203ENST00000377387 ZNRF2Q8NHG8 242 aa13.46□□□□□ -0.25
SF1-203ENST00000377387 SPANXB1Q9NS25 103 aaPredicted RBP13.46□□□□□ -0.25
SF1-203ENST00000377387 IGHV3-16A0A0C4DH30 117 aa13.46□□□□□ -0.25
SF1-203ENST00000377387 F8W1H4 67 aa13.46□□□□□ -0.25
SF1-203ENST00000377387 NDUFS8O00217 210 aa13.46□□□□□ -0.25
SF1-203ENST00000377387 TGFAP01135 160 aa13.46□□□□□ -0.25
SF1-203ENST00000377387 TSSC4Q9Y5U2 329 aaPredicted RBP13.46□□□□□ -0.25
SF1-203ENST00000377387 COX6B1P14854 86 aa13.46□□□□□ -0.26
SF1-203ENST00000377387 SNRPD3P62318 126 aaKnown RBP13.46□□□□□ -0.26
SF1-203ENST00000377387 TRBV7-9A0A0J9YWB2 115 aa13.45□□□□□ -0.26
SF1-203ENST00000377387 K7EMT4 169 aa13.45□□□□□ -0.26
SF1-203ENST00000377387 A0A0J9YX75 114 aa13.45□□□□□ -0.26
SF1-203ENST00000377387 A0A1B0GWB2 263 aa13.45□□□□□ -0.26
SF1-203ENST00000377387 HERVK_113P61574 105 aa13.45□□□□□ -0.26
SF1-203ENST00000377387 HIST2H2BDQ6DRA6 164 aa13.45□□□□□ -0.26
SF1-203ENST00000377387 WNK1Q9H4A3 2382 aa13.44□□□□□ -0.26
SF1-203ENST00000377387 ZNF876PQ49A33 203 aa13.44□□□□□ -0.26
SF1-203ENST00000377387 BRI3O95415 125 aa13.44□□□□□ -0.26
SF1-203ENST00000377387 PSMB2P49721 201 aa13.44□□□□□ -0.26
SF1-203ENST00000377387 POM121L12Q8N7R1 296 aa13.43□□□□□ -0.26
SF1-203ENST00000377387 SPAG8Q99932 426 aaPredicted RBP13.43□□□□□ -0.26
SF1-203ENST00000377387 ZNF418Q8TF45 676 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 596.7 ms