RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 DUSP14O95147 198 aaKnown RBP17.68■□□□□ 0.42
CDK9-201ENST00000373264 Q5PR19 223 aa17.68■□□□□ 0.42
CDK9-201ENST00000373264 K7ERJ3 54 aa17.67■□□□□ 0.42
CDK9-201ENST00000373264 FOSL1P15407 271 aa17.67■□□□□ 0.42
CDK9-201ENST00000373264 SNRPD3P62318 126 aaKnown RBP17.67■□□□□ 0.42
CDK9-201ENST00000373264 IGHV3-16A0A0C4DH30 117 aa17.67■□□□□ 0.42
CDK9-201ENST00000373264 PRM2P04554 102 aa17.67■□□□□ 0.42
CDK9-201ENST00000373264 NEXN-AS1Q8NBZ9 246 aa17.67■□□□□ 0.42
CDK9-201ENST00000373264 BAALCQ8WXS3 180 aa17.67■□□□□ 0.42
CDK9-201ENST00000373264 CHTOPQ9Y3Y2 248 aaKnown RBP17.66■□□□□ 0.42
CDK9-201ENST00000373264 A6NDN8 102 aa17.65■□□□□ 0.42
CDK9-201ENST00000373264 F8VRH5 84 aa17.65■□□□□ 0.42
CDK9-201ENST00000373264 EMP1P54849 157 aa17.65■□□□□ 0.42
CDK9-201ENST00000373264 RPL39P62891 51 aaKnown RBP17.65■□□□□ 0.42
CDK9-201ENST00000373264 POM121L12Q8N7R1 296 aa17.65■□□□□ 0.42
CDK9-201ENST00000373264 H7C1H1 209 aa17.65■□□□□ 0.42
CDK9-201ENST00000373264 KNCNA6PVL3 124 aa17.64■□□□□ 0.42
CDK9-201ENST00000373264 H3BRM9 83 aa17.64■□□□□ 0.42
CDK9-201ENST00000373264 TCTEX1D4Q5JR98 221 aa17.64■□□□□ 0.42
CDK9-201ENST00000373264 Q96MF0 132 aa17.64■□□□□ 0.42
CDK9-201ENST00000373264 SETD2Q9BYW2 2564 aaPredicted RBP17.64■□□□□ 0.41
CDK9-201ENST00000373264 TMEM89A2RUT3 159 aa17.64■□□□□ 0.41
CDK9-201ENST00000373264 C9orf118A6NHY6 69 aa17.64■□□□□ 0.41
CDK9-201ENST00000373264 RBMY1A1P0DJD3 496 aaKnown RBP17.64■□□□□ 0.41
CDK9-201ENST00000373264 RBMY1CP0DJD4 496 aa17.64■□□□□ 0.41
CDK9-201ENST00000373264 RBMY1FQ15415 496 aaKnown RBP17.64■□□□□ 0.41
CDK9-201ENST00000373264 PRSS29PA6NIE9 313 aa17.63■□□□□ 0.41
CDK9-201ENST00000373264 TSHBP01222 138 aa17.63■□□□□ 0.41
CDK9-201ENST00000373264 HTN1P15515 57 aa17.63■□□□□ 0.41
CDK9-201ENST00000373264 UBE2E2Q96LR5 201 aa17.63■□□□□ 0.41
CDK9-201ENST00000373264 ELANEP08246 267 aa17.63■□□□□ 0.41
CDK9-201ENST00000373264 CDKN1BP46527 198 aa17.63■□□□□ 0.41
CDK9-201ENST00000373264 PLNP26678 52 aa17.62■□□□□ 0.41
CDK9-201ENST00000373264 C9orf85Q96MD7 179 aa17.62■□□□□ 0.41
CDK9-201ENST00000373264 TENM4Q6N022 2769 aa17.62■□□□□ 0.41
CDK9-201ENST00000373264 NIPBLQ6KC79 2804 aaeCLIP17.62■□□□□ 0.41
CDK9-201ENST00000373264 TRAV12-1A0A0B4J245 112 aa17.62■□□□□ 0.41
CDK9-201ENST00000373264 HLA-DRB4P13762 266 aa17.62■□□□□ 0.41
CDK9-201ENST00000373264 DEFB113Q30KQ7 82 aa17.62■□□□□ 0.41
CDK9-201ENST00000373264 TP53TG1Q9Y2A0 90 aa17.62■□□□□ 0.41
CDK9-201ENST00000373264 HLA-DRB4X5D2U9 266 aa17.62■□□□□ 0.41
CDK9-201ENST00000373264 WNK1Q9H4A3 2382 aa17.61■□□□□ 0.41
CDK9-201ENST00000373264 MORN3Q6PF18 240 aaPredicted RBP17.61■□□□□ 0.41
CDK9-201ENST00000373264 CRYGDP07320 174 aa17.61■□□□□ 0.41
CDK9-201ENST00000373264 POLR2KP53803 58 aaKnown RBP17.61■□□□□ 0.41
CDK9-201ENST00000373264 AMTNQ6UX39 209 aa17.61■□□□□ 0.41
CDK9-201ENST00000373264 ZFP2Q6ZN57 461 aa17.6■□□□□ 0.41
CDK9-201ENST00000373264 HIGD1BQ9P298 99 aa17.6■□□□□ 0.41
CDK9-201ENST00000373264 ZNF256Q9Y2P7 627 aaPredicted RBP17.6■□□□□ 0.41
CDK9-201ENST00000373264 FLNAP21333 2647 aaKnown RBP17.6■□□□□ 0.41
CDK9-201ENST00000373264 IGHV1OR15-1A0A075B7D0 117 aa17.6■□□□□ 0.41
CDK9-201ENST00000373264 SDHAF1A6NFY7 115 aa17.6■□□□□ 0.41
CDK9-201ENST00000373264 LGALS9O00182 355 aa17.6■□□□□ 0.41
CDK9-201ENST00000373264 ZNF56Q15929 161 aa17.59■□□□□ 0.41
CDK9-201ENST00000373264 SAMD13Q5VXD3 122 aa17.59■□□□□ 0.41
CDK9-201ENST00000373264 GAGE10A6NGK3 116 aa17.59■□□□□ 0.41
CDK9-201ENST00000373264 KHDC1LQ5JSQ8 128 aa17.59■□□□□ 0.41
CDK9-201ENST00000373264 HIST2H2BCQ6DN03 193 aa17.59■□□□□ 0.41
CDK9-201ENST00000373264 GAGE12BA1L429 117 aa17.58■□□□□ 0.4
CDK9-201ENST00000373264 RBX1P62877 108 aa17.58■□□□□ 0.4
CDK9-201ENST00000373264 KRTAP1-3Q8IUG1 177 aa17.58■□□□□ 0.4
CDK9-201ENST00000373264 DEFB131AP59861 70 aa17.57■□□□□ 0.4
CDK9-201ENST00000373264 ODF3Q96PU9 254 aa17.57■□□□□ 0.4
CDK9-201ENST00000373264 NHP2Q9NX24 153 aaKnown RBP17.57■□□□□ 0.4
CDK9-201ENST00000373264 OR11H1Q8NG94 326 aa17.57■□□□□ 0.4
CDK9-201ENST00000373264 UFSP1Q6NVU6 142 aa17.56■□□□□ 0.4
CDK9-201ENST00000373264 OPRPNQ99935 248 aaPredicted RBP17.56■□□□□ 0.4
CDK9-201ENST00000373264 CST9LQ9H4G1 147 aa17.56■□□□□ 0.4
CDK9-201ENST00000373264 IGHV3-73A0A0B4J1V6 119 aa17.56■□□□□ 0.4
CDK9-201ENST00000373264 CEND1Q8N111 149 aa17.56■□□□□ 0.4
CDK9-201ENST00000373264 CYSLTR1Q9Y271 337 aa17.56■□□□□ 0.4
CDK9-201ENST00000373264 RBMY1BA6NDE4 496 aaKnown RBP17.55■□□□□ 0.4
CDK9-201ENST00000373264 RBMY1EA6NEQ0 496 aaKnown RBP17.55■□□□□ 0.4
CDK9-201ENST00000373264 IGIPA6NJ69 53 aa17.55■□□□□ 0.4
CDK9-201ENST00000373264 M0QY20 66 aa17.55■□□□□ 0.4
CDK9-201ENST00000373264 RBMY1DP0C7P1 496 aaKnown RBP17.55■□□□□ 0.4
CDK9-201ENST00000373264 ZNF876PQ49A33 203 aa17.55■□□□□ 0.4
CDK9-201ENST00000373264 PPP1R17O96001 155 aa17.55■□□□□ 0.4
CDK9-201ENST00000373264 RNF152Q8N8N0 203 aa17.55■□□□□ 0.4
CDK9-201ENST00000373264 ACANP16112 2415 aa17.55■□□□□ 0.4
CDK9-201ENST00000373264 SMIM13P0DJ93 91 aa17.54■□□□□ 0.4
CDK9-201ENST00000373264 FOXI2Q6ZQN5 318 aa17.54■□□□□ 0.4
CDK9-201ENST00000373264 TMEM61Q8N0U2 210 aa17.54■□□□□ 0.4
CDK9-201ENST00000373264 CD300EQ496F6 205 aaPredicted RBP17.54■□□□□ 0.4
CDK9-201ENST00000373264 C11orf44Q8N8P7 122 aa17.54■□□□□ 0.4
CDK9-201ENST00000373264 PRADC1Q9BSG0 188 aa17.54■□□□□ 0.4
CDK9-201ENST00000373264 IGLV4-69A0A075B6H9 119 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 C11orf86A6NJI1 115 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 OR11H12B2RN74 326 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 VCYO14598 125 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 PROK1P58294 105 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 RNF151Q2KHN1 245 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 KLHL30-AS1Q8NEE0 82 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 OR11H2Q8NH07 326 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 PHLDA1Q8WV24 401 aaPredicted RBP17.53■□□□□ 0.4
CDK9-201ENST00000373264 A0A1W2PPM0 123 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 KIR2DL4Q99706 377 aa17.53■□□□□ 0.4
CDK9-201ENST00000373264 P0DMU3 169 aa17.52■□□□□ 0.4
CDK9-201ENST00000373264 FAM231AP0DMU4 169 aa17.52■□□□□ 0.4
CDK9-201ENST00000373264 FAM231CP0DMU5 169 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms