RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ZNF705AQ6ZN79 300 aaPredicted RBP19.06■□□□□ 0.64
ATPAF1-202ENST00000371937 PRSS3P2Q8NHM4 247 aa19.06■□□□□ 0.64
ATPAF1-202ENST00000371937 OR10D4PQ8NGN7 298 aa19.05■□□□□ 0.64
ATPAF1-202ENST00000371937 RNASE8Q8TDE3 154 aaKnown RBP19.05■□□□□ 0.64
ATPAF1-202ENST00000371937 TRAV26-2A0A0B4J265 109 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 KIR2DL5BA0A0G2JN68 375 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 KIR2DL5BA0A0G2JPC4 375 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 KIR2DL5AQ8N109 375 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 KIR2DL5BQ8NHK3 375 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 URB1-AS1Q96HZ7 61 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 MAP1LC3AQ9H492 121 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 A0A087WWL8 130 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 GAS8-AS1O95177 125 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 LINC00315P59091 139 aa19.04■□□□□ 0.64
ATPAF1-202ENST00000371937 APOC4P55056 127 aa19.03■□□□□ 0.64
ATPAF1-202ENST00000371937 NDUFAF3Q9BU61 184 aa19.03■□□□□ 0.64
ATPAF1-202ENST00000371937 LOC389332A0A1B0GUA5 103 aa19.02■□□□□ 0.64
ATPAF1-202ENST00000371937 GATA1P15976 413 aaPredicted RBP19.02■□□□□ 0.64
ATPAF1-202ENST00000371937 AMTP48728 403 aa19.02■□□□□ 0.64
ATPAF1-202ENST00000371937 EGFEM1PQ0D2K5 195 aa19.02■□□□□ 0.64
ATPAF1-202ENST00000371937 FA2HQ7L5A8 372 aa19.02■□□□□ 0.64
ATPAF1-202ENST00000371937 C16orf74Q96GX8 76 aa19.02■□□□□ 0.64
ATPAF1-202ENST00000371937 A8MWV9 139 aa19.02■□□□□ 0.63
ATPAF1-202ENST00000371937 PPP1R17O96001 155 aa19.02■□□□□ 0.63
ATPAF1-202ENST00000371937 CRYGDP07320 174 aa19.02■□□□□ 0.63
ATPAF1-202ENST00000371937 RRN3P1Q2M238 152 aa19.02■□□□□ 0.63
ATPAF1-202ENST00000371937 FAM74A4Q5TZK3 123 aa19.02■□□□□ 0.63
ATPAF1-202ENST00000371937 NRACQ8N912 160 aa19.02■□□□□ 0.63
ATPAF1-202ENST00000371937 PMCHP20382 165 aa19.01■□□□□ 0.63
ATPAF1-202ENST00000371937 IFI27P40305 119 aaPredicted RBP19.01■□□□□ 0.63
ATPAF1-202ENST00000371937 IL17DQ8TAD2 202 aa19.01■□□□□ 0.63
ATPAF1-202ENST00000371937 AP5S1Q9NUS5 200 aa19.01■□□□□ 0.63
ATPAF1-202ENST00000371937 F5H697 171 aa19■□□□□ 0.63
ATPAF1-202ENST00000371937 RASL10AQ92737 203 aa19■□□□□ 0.63
ATPAF1-202ENST00000371937 FAM19A2Q8N3H0 131 aa18.99■□□□□ 0.63
ATPAF1-202ENST00000371937 NXT2Q9NPJ8 142 aaKnown RBP18.99■□□□□ 0.63
ATPAF1-202ENST00000371937 PRSS47A8MTI9 375 aa18.98■□□□□ 0.63
ATPAF1-202ENST00000371937 KRTAP10-11P60412 298 aa18.97■□□□□ 0.63
ATPAF1-202ENST00000371937 IGHV4-30-4P0DP06 118 aa18.97■□□□□ 0.63
ATPAF1-202ENST00000371937 DAZ2Q13117 558 aaKnown RBP18.97■□□□□ 0.63
ATPAF1-202ENST00000371937 ZNF56Q15929 161 aa18.97■□□□□ 0.63
ATPAF1-202ENST00000371937 SUMO4Q6EEV6 95 aa18.97■□□□□ 0.63
ATPAF1-202ENST00000371937 C20orf78Q9BR46 151 aa18.97■□□□□ 0.63
ATPAF1-202ENST00000371937 MRPL16Q9NX20 251 aaKnown RBP18.97■□□□□ 0.63
ATPAF1-202ENST00000371937 LGALS9BQ3B8N2 356 aa18.96■□□□□ 0.63
ATPAF1-202ENST00000371937 PKD1L1Q8TDX9 2849 aa18.94■□□□□ 0.62
ATPAF1-202ENST00000371937 TRGV1A0A0A0MS02 117 aa18.94■□□□□ 0.62
ATPAF1-202ENST00000371937 SMIM9A6NGZ8 99 aa18.94■□□□□ 0.62
ATPAF1-202ENST00000371937 SMIM6P0DI80 62 aa18.94■□□□□ 0.62
ATPAF1-202ENST00000371937 CFAP126Q5VTH2 177 aa18.94■□□□□ 0.62
ATPAF1-202ENST00000371937 Q8N8P6 123 aa18.94■□□□□ 0.62
ATPAF1-202ENST00000371937 IGHV1-24A0A0C4DH33 117 aa18.93■□□□□ 0.62
ATPAF1-202ENST00000371937 RHODO00212 210 aa18.93■□□□□ 0.62
ATPAF1-202ENST00000371937 SUMO2P61956 95 aaKnown RBP18.93■□□□□ 0.62
ATPAF1-202ENST00000371937 RPL39LQ96EH5 51 aaKnown RBP18.93■□□□□ 0.62
ATPAF1-202ENST00000371937 NOP10Q9NPE3 64 aaKnown RBP18.93■□□□□ 0.62
ATPAF1-202ENST00000371937 PLAC8L1A1L4L8 177 aa18.92■□□□□ 0.62
ATPAF1-202ENST00000371937 LINC01546A6NGU7 62 aa18.92■□□□□ 0.62
ATPAF1-202ENST00000371937 RS1O15537 224 aa18.92■□□□□ 0.62
ATPAF1-202ENST00000371937 PMCHL1Q16048 86 aa18.91■□□□□ 0.62
ATPAF1-202ENST00000371937 UFSP1Q6NVU6 142 aa18.91■□□□□ 0.62
ATPAF1-202ENST00000371937 MDFIQ99750 246 aa18.91■□□□□ 0.62
ATPAF1-202ENST00000371937 OVOL2Q9BRP0 275 aa18.91■□□□□ 0.62
ATPAF1-202ENST00000371937 H7C1H1 209 aa18.9■□□□□ 0.62
ATPAF1-202ENST00000371937 M0QY20 66 aa18.9■□□□□ 0.62
ATPAF1-202ENST00000371937 Q6ZWC4 215 aa18.9■□□□□ 0.62
ATPAF1-202ENST00000371937 LINC00518Q8N0U6 118 aa18.9■□□□□ 0.62
ATPAF1-202ENST00000371937 IGLV2-18A0A075B6J9 118 aa18.9■□□□□ 0.62
ATPAF1-202ENST00000371937 G3V4G9 280 aa18.9■□□□□ 0.62
ATPAF1-202ENST00000371937 SMIM2Q9BVW6 85 aa18.9■□□□□ 0.62
ATPAF1-202ENST00000371937 ZFP2Q6ZN57 461 aa18.89■□□□□ 0.61
ATPAF1-202ENST00000371937 Q6ZTI0 123 aa18.89■□□□□ 0.61
ATPAF1-202ENST00000371937 EDA2RQ9HAV5 297 aa18.89■□□□□ 0.61
ATPAF1-202ENST00000371937 ST20Q9HBF5 79 aa18.89■□□□□ 0.61
ATPAF1-202ENST00000371937 A8MZ25 164 aa18.88■□□□□ 0.61
ATPAF1-202ENST00000371937 DEFB135Q30KP9 77 aa18.88■□□□□ 0.61
ATPAF1-202ENST00000371937 PYY3Q5JQD4 70 aa18.88■□□□□ 0.61
ATPAF1-202ENST00000371937 SAMD5Q5TGI4 173 aa18.88■□□□□ 0.61
ATPAF1-202ENST00000371937 X6R8D5 127 aa18.88■□□□□ 0.61
ATPAF1-202ENST00000371937 IGHV3-73A0A0B4J1V6 119 aa18.88■□□□□ 0.61
ATPAF1-202ENST00000371937 ANK2Q01484 3957 aa18.88■□□□□ 0.61
ATPAF1-202ENST00000371937 TRBV6-5A0A0K0K1A5 114 aa18.87■□□□□ 0.61
ATPAF1-202ENST00000371937 LEPROTL1O95214 131 aa18.87■□□□□ 0.61
ATPAF1-202ENST00000371937 RPL32P62910 135 aaKnown RBP18.87■□□□□ 0.61
ATPAF1-202ENST00000371937 JOSD1Q15040 202 aaPredicted RBP18.87■□□□□ 0.61
ATPAF1-202ENST00000371937 OR4C5Q8NGB2 326 aa18.87■□□□□ 0.61
ATPAF1-202ENST00000371937 NIT2Q9NQR4 276 aa18.86■□□□□ 0.61
ATPAF1-202ENST00000371937 CMYA5Q8N3K9 4069 aa18.86■□□□□ 0.61
ATPAF1-202ENST00000371937 C12orf57Q99622 126 aa18.86■□□□□ 0.61
ATPAF1-202ENST00000371937 K7EMI3 77 aa18.85■□□□□ 0.61
ATPAF1-202ENST00000371937 TRAV4A0A0B4J268 109 aa18.84■□□□□ 0.61
ATPAF1-202ENST00000371937 HBDP02042 147 aa18.84■□□□□ 0.61
ATPAF1-202ENST00000371937 HSPB8Q9UJY1 196 aa18.84■□□□□ 0.61
ATPAF1-202ENST00000371937 LAGE3Q14657 143 aa18.84■□□□□ 0.61
ATPAF1-202ENST00000371937 IGHV3-53P01767 116 aa18.83■□□□□ 0.6
ATPAF1-202ENST00000371937 POLR2KP53803 58 aaKnown RBP18.83■□□□□ 0.6
ATPAF1-202ENST00000371937 KRTDAPP60985 99 aa18.83■□□□□ 0.6
ATPAF1-202ENST00000371937 OR11H2Q8NH07 326 aa18.83■□□□□ 0.6
ATPAF1-202ENST00000371937 TMEM70Q9BUB7 260 aa18.83■□□□□ 0.6
ATPAF1-202ENST00000371937 VCYO14598 125 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms