RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 FABP4P15090 132 aa11.9□□□□□ -0.5
PDLIM1-201ENST00000329399 ZNF415Q09FC8 603 aa11.9□□□□□ -0.5
PDLIM1-201ENST00000329399 GSN-AS1Q9NRJ2 163 aa11.9□□□□□ -0.5
PDLIM1-201ENST00000329399 MUC21A0A0G2JKD1 596 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 MUC21A0A140T8X8 626 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 IFITM10A6NMD0 228 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 D6R8Y8 96 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 M0R381 172 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 LINC00614P0C842 121 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 POM121L12Q8N7R1 296 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 RNF185Q96GF1 192 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 LINC01587Q99440 93 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 GOLT1BQ9Y3E0 138 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 PRSS47A8MTI9 375 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 EVI2AP22794 236 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 DEFB135Q30KP9 77 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 NIT1Q86X76 327 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
PDLIM1-201ENST00000329399 RYR3Q15413 4870 aa11.88□□□□□ -0.51
PDLIM1-201ENST00000329399 HSBP1O75506 76 aa11.88□□□□□ -0.51
PDLIM1-201ENST00000329399 GIG44P09565 113 aaPredicted RBP11.88□□□□□ -0.51
PDLIM1-201ENST00000329399 FXYD7P58549 80 aa11.88□□□□□ -0.51
PDLIM1-201ENST00000329399 SSTP61278 116 aa11.88□□□□□ -0.51
PDLIM1-201ENST00000329399 TMEM208Q9BTX3 173 aa11.88□□□□□ -0.51
PDLIM1-201ENST00000329399 TIMM8BQ9Y5J9 83 aaPredicted RBP11.88□□□□□ -0.51
PDLIM1-201ENST00000329399 PDZD11Q5EBL8 140 aa11.87□□□□□ -0.51
PDLIM1-201ENST00000329399 OR10D4PQ8NGN7 298 aa11.87□□□□□ -0.51
PDLIM1-201ENST00000329399 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
PDLIM1-201ENST00000329399 LYSTQ99698 3801 aa11.87□□□□□ -0.51
PDLIM1-201ENST00000329399 MAP1LC3AQ9H492 121 aa11.87□□□□□ -0.51
PDLIM1-201ENST00000329399 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
PDLIM1-201ENST00000329399 MDFICQ9P1T7 246 aa11.87□□□□□ -0.51
PDLIM1-201ENST00000329399 KIR2DL5BA0A0G2JN68 375 aa11.86□□□□□ -0.51
PDLIM1-201ENST00000329399 KIR2DL5BA0A0G2JPC4 375 aa11.86□□□□□ -0.51
PDLIM1-201ENST00000329399 M0R2P5 195 aa11.86□□□□□ -0.51
PDLIM1-201ENST00000329399 LINC00310P59036 64 aa11.86□□□□□ -0.51
PDLIM1-201ENST00000329399 KIR2DL5AQ8N109 375 aa11.86□□□□□ -0.51
PDLIM1-201ENST00000329399 KIR2DL5BQ8NHK3 375 aa11.86□□□□□ -0.51
PDLIM1-201ENST00000329399 CSTL1Q9H114 145 aa11.86□□□□□ -0.51
PDLIM1-201ENST00000329399 XCL2Q9UBD3 114 aa11.86□□□□□ -0.51
PDLIM1-201ENST00000329399 PLECQ15149 4684 aaKnown RBP11.86□□□□□ -0.51
PDLIM1-201ENST00000329399 RBMY1A1P0DJD3 496 aaKnown RBP11.85□□□□□ -0.51
PDLIM1-201ENST00000329399 RBMY1CP0DJD4 496 aa11.85□□□□□ -0.51
PDLIM1-201ENST00000329399 APOC4P55056 127 aa11.85□□□□□ -0.51
PDLIM1-201ENST00000329399 RBMY1FQ15415 496 aaKnown RBP11.85□□□□□ -0.51
PDLIM1-201ENST00000329399 FA2HQ7L5A8 372 aa11.85□□□□□ -0.51
PDLIM1-201ENST00000329399 C20orf78Q9BR46 151 aa11.85□□□□□ -0.51
PDLIM1-201ENST00000329399 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
PDLIM1-201ENST00000329399 DYNC2H1Q8NCM8 4307 aaKnown RBP11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 A8MWV9 139 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 K7EMI3 77 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 NUPR1O60356 82 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 AMTP48728 403 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 IQCJQ1A5X6 159 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 RNASEKQ6P5S7 137 aaKnown RBP11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 Q6ZWC4 215 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 LINC00518Q8N0U6 118 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 MUC7Q8TAX7 377 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 RNF183Q96D59 192 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 KIF25-AS1Q9Y6Z4 181 aa11.84□□□□□ -0.51
PDLIM1-201ENST00000329399 LINC01546A6NGU7 62 aa11.83□□□□□ -0.52
PDLIM1-201ENST00000329399 SPRY2O43597 315 aa11.83□□□□□ -0.52
PDLIM1-201ENST00000329399 TNFRSF6BO95407 300 aa11.83□□□□□ -0.52
PDLIM1-201ENST00000329399 ZNF876PQ49A33 203 aa11.83□□□□□ -0.52
PDLIM1-201ENST00000329399 C14orf178Q8N769 122 aaPredicted RBP11.83□□□□□ -0.52
PDLIM1-201ENST00000329399 SACSQ9NZJ4 4579 aa11.83□□□□□ -0.52
PDLIM1-201ENST00000329399 ZFAND6Q6FIF0 208 aa11.83□□□□□ -0.52
PDLIM1-201ENST00000329399 C1orf158Q8N1D5 194 aa11.83□□□□□ -0.52
PDLIM1-201ENST00000329399 TMEM263Q8WUH6 116 aaKnown RBP11.83□□□□□ -0.52
PDLIM1-201ENST00000329399 RPL32P62910 135 aaKnown RBP11.82□□□□□ -0.52
PDLIM1-201ENST00000329399 JOSD1Q15040 202 aaPredicted RBP11.82□□□□□ -0.52
PDLIM1-201ENST00000329399 CASC10Q5T4H9 136 aa11.82□□□□□ -0.52
PDLIM1-201ENST00000329399 C11orf72Q8NBR9 251 aa11.82□□□□□ -0.52
PDLIM1-201ENST00000329399 RHODO00212 210 aa11.81□□□□□ -0.52
PDLIM1-201ENST00000329399 CIDEAO60543 219 aa11.81□□□□□ -0.52
PDLIM1-201ENST00000329399 NPYP01303 97 aa11.81□□□□□ -0.52
PDLIM1-201ENST00000329399 LGALS9BQ3B8N2 356 aa11.81□□□□□ -0.52
PDLIM1-201ENST00000329399 Q8N8P6 123 aa11.81□□□□□ -0.52
PDLIM1-201ENST00000329399 C16orf74Q96GX8 76 aa11.81□□□□□ -0.52
PDLIM1-201ENST00000329399 TP53TG1Q9Y2A0 90 aa11.81□□□□□ -0.52
PDLIM1-201ENST00000329399 MUC4Q99102 2169 aa11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 A0A0J9YWU9 116 aa11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 SMIM9A6NGZ8 99 aa11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 H7C1H1 209 aa11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 LINC00315P59091 139 aa11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 ZNF705AQ6ZN79 300 aaPredicted RBP11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 NRACQ8N912 160 aa11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 CSNK1G2-AS1Q8NCQ2 148 aa11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 RASL10AQ92737 203 aa11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 URB1-AS1Q96HZ7 61 aa11.8□□□□□ -0.52
PDLIM1-201ENST00000329399 LINC01549A6NIU2 74 aa11.79□□□□□ -0.52
PDLIM1-201ENST00000329399 C3orf84H3BNL1 204 aa11.79□□□□□ -0.52
PDLIM1-201ENST00000329399 HTN1P15515 57 aa11.79□□□□□ -0.52
PDLIM1-201ENST00000329399 G0S2P27469 103 aa11.79□□□□□ -0.52
PDLIM1-201ENST00000329399 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
PDLIM1-201ENST00000329399 RNASE8Q8TDE3 154 aaKnown RBP11.79□□□□□ -0.52
PDLIM1-201ENST00000329399 C12orf57Q99622 126 aa11.79□□□□□ -0.52
PDLIM1-201ENST00000329399 HSPB8Q9UJY1 196 aa11.79□□□□□ -0.52
PDLIM1-201ENST00000329399 TCAPO15273 167 aa11.78□□□□□ -0.52
PDLIM1-201ENST00000329399 NCR2O95944 276 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms