RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RBMY1CP0DJD4 496 aa13.65□□□□□ -0.22
EXOSC3-201ENST00000327304 IFI27P40305 119 aaPredicted RBP13.65□□□□□ -0.22
EXOSC3-201ENST00000327304 NUTF2P61970 127 aaKnown RBP13.65□□□□□ -0.22
EXOSC3-201ENST00000327304 RBMY1FQ15415 496 aaKnown RBP13.65□□□□□ -0.22
EXOSC3-201ENST00000327304 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
EXOSC3-201ENST00000327304 MORN3Q6PF18 240 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-201ENST00000327304 TNFRSF6BO95407 300 aa13.64□□□□□ -0.23
EXOSC3-201ENST00000327304 PCP4L1A6NKN8 68 aa13.63□□□□□ -0.23
EXOSC3-201ENST00000327304 PRSS47A8MTI9 375 aa13.63□□□□□ -0.23
EXOSC3-201ENST00000327304 KRTDAPP60985 99 aa13.63□□□□□ -0.23
EXOSC3-201ENST00000327304 LINC00467Q9BRT7 94 aa13.63□□□□□ -0.23
EXOSC3-201ENST00000327304 CSTL1Q9H114 145 aa13.63□□□□□ -0.23
EXOSC3-201ENST00000327304 GSN-AS1Q9NRJ2 163 aa13.63□□□□□ -0.23
EXOSC3-201ENST00000327304 LOC389332A0A1B0GUA5 103 aa13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 SPRY2O43597 315 aa13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 INSP01308 110 aa13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 C3orf79P0CE67 100 aa13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 POM121L12Q8N7R1 296 aa13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 SYT8Q8NBV8 401 aa13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 MDFICQ9P1T7 246 aa13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 LINC01546A6NGU7 62 aa13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 K7EIL1 84 aa13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 NXT2Q9NPJ8 142 aaKnown RBP13.62□□□□□ -0.23
EXOSC3-201ENST00000327304 CBY3A6NI87 242 aa13.61□□□□□ -0.23
EXOSC3-201ENST00000327304 A8MZ25 164 aa13.61□□□□□ -0.23
EXOSC3-201ENST00000327304 GAS8-AS1O95177 125 aa13.61□□□□□ -0.23
EXOSC3-201ENST00000327304 LEPROTL1O95214 131 aa13.61□□□□□ -0.23
EXOSC3-201ENST00000327304 PMCHL1Q16048 86 aa13.61□□□□□ -0.23
EXOSC3-201ENST00000327304 C14orf178Q8N769 122 aaPredicted RBP13.61□□□□□ -0.23
EXOSC3-201ENST00000327304 NRACQ8N912 160 aa13.61□□□□□ -0.23
EXOSC3-201ENST00000327304 KIF25-AS1Q9Y6Z4 181 aa13.61□□□□□ -0.23
EXOSC3-201ENST00000327304 KIR2DL5BA0A0G2JN68 375 aa13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 KIR2DL5BA0A0G2JPC4 375 aa13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 SMIM17P0DL12 118 aa13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 GATA1P15976 413 aaPredicted RBP13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 APOC4P55056 127 aa13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 KIR2DL5AQ8N109 375 aa13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 C1orf158Q8N1D5 194 aa13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 CSNK1G2-AS1Q8NCQ2 148 aa13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 KIR2DL5BQ8NHK3 375 aa13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 C1QTNF4Q9BXJ3 329 aa13.6□□□□□ -0.23
EXOSC3-201ENST00000327304 BTF3P20290 206 aaKnown RBP13.59□□□□□ -0.23
EXOSC3-201ENST00000327304 Q8N976 141 aa13.59□□□□□ -0.23
EXOSC3-201ENST00000327304 HSPB8Q9UJY1 196 aa13.59□□□□□ -0.23
EXOSC3-201ENST00000327304 TRAV26-2A0A0B4J265 109 aa13.58□□□□□ -0.24
EXOSC3-201ENST00000327304 PPP1R17O96001 155 aa13.58□□□□□ -0.24
EXOSC3-201ENST00000327304 Q8N8P6 123 aa13.58□□□□□ -0.24
EXOSC3-201ENST00000327304 LINC00315P59091 139 aa13.57□□□□□ -0.24
EXOSC3-201ENST00000327304 TEX43Q6ZNM6 134 aa13.57□□□□□ -0.24
EXOSC3-201ENST00000327304 MUC4Q99102 2169 aa13.57□□□□□ -0.24
EXOSC3-201ENST00000327304 IGHV3OR16-12A0A075B7B8 117 aa13.57□□□□□ -0.24
EXOSC3-201ENST00000327304 PRM2P04554 102 aa13.57□□□□□ -0.24
EXOSC3-201ENST00000327304 TMEM70Q9BUB7 260 aa13.57□□□□□ -0.24
EXOSC3-201ENST00000327304 NBEAL2Q6ZNJ1 2754 aa13.57□□□□□ -0.24
EXOSC3-201ENST00000327304 IGLV2-18A0A075B6J9 118 aa13.56□□□□□ -0.24
EXOSC3-201ENST00000327304 MGPP08493 103 aa13.56□□□□□ -0.24
EXOSC3-201ENST00000327304 PKIAP61925 76 aa13.56□□□□□ -0.24
EXOSC3-201ENST00000327304 PIK3CD-AS1Q5SR53 167 aa13.56□□□□□ -0.24
EXOSC3-201ENST00000327304 LINC01587Q99440 93 aa13.56□□□□□ -0.24
EXOSC3-201ENST00000327304 C20orf78Q9BR46 151 aa13.56□□□□□ -0.24
EXOSC3-201ENST00000327304 TMEM208Q9BTX3 173 aa13.56□□□□□ -0.24
EXOSC3-201ENST00000327304 A0A096LNJ9 63 aa13.55□□□□□ -0.24
EXOSC3-201ENST00000327304 ZNF415Q09FC8 603 aa13.55□□□□□ -0.24
EXOSC3-201ENST00000327304 PTH2Q96A98 100 aa13.55□□□□□ -0.24
EXOSC3-201ENST00000327304 GOLT1BQ9Y3E0 138 aa13.55□□□□□ -0.24
EXOSC3-201ENST00000327304 HBDP02042 147 aa13.55□□□□□ -0.24
EXOSC3-201ENST00000327304 HTN1P15515 57 aa13.55□□□□□ -0.24
EXOSC3-201ENST00000327304 DEFB135Q30KP9 77 aa13.55□□□□□ -0.24
EXOSC3-201ENST00000327304 ZNF664Q8N3J9 261 aa13.55□□□□□ -0.24
EXOSC3-201ENST00000327304 RASL10AQ92737 203 aa13.55□□□□□ -0.24
EXOSC3-201ENST00000327304 ZNF876PQ49A33 203 aa13.54□□□□□ -0.24
EXOSC3-201ENST00000327304 MAP1LC3CQ9BXW4 147 aa13.54□□□□□ -0.24
EXOSC3-201ENST00000327304 JPT2Q9H910 190 aa13.54□□□□□ -0.24
EXOSC3-201ENST00000327304 TSTD3H0UI37 97 aa13.53□□□□□ -0.24
EXOSC3-201ENST00000327304 SYS1-DBNDD2H3BUS1 97 aa13.53□□□□□ -0.24
EXOSC3-201ENST00000327304 DEFB121Q5J5C9 76 aa13.53□□□□□ -0.24
EXOSC3-201ENST00000327304 ZNF705AQ6ZN79 300 aaPredicted RBP13.53□□□□□ -0.24
EXOSC3-201ENST00000327304 SUMO2P61956 95 aaKnown RBP13.53□□□□□ -0.24
EXOSC3-201ENST00000327304 LINC00173Q6ZV60 143 aa13.53□□□□□ -0.24
EXOSC3-201ENST00000327304 K7EMI3 77 aa13.52□□□□□ -0.25
EXOSC3-201ENST00000327304 M0R2P5 195 aa13.52□□□□□ -0.25
EXOSC3-201ENST00000327304 CRYGDP07320 174 aa13.52□□□□□ -0.25
EXOSC3-201ENST00000327304 PET117Q6UWS5 81 aa13.52□□□□□ -0.25
EXOSC3-201ENST00000327304 SPXQ9BT56 116 aa13.52□□□□□ -0.25
EXOSC3-201ENST00000327304 SMIM2Q9BVW6 85 aa13.52□□□□□ -0.25
EXOSC3-201ENST00000327304 A0A087WWL8 130 aa13.51□□□□□ -0.25
EXOSC3-201ENST00000327304 FCER1GP30273 86 aa13.51□□□□□ -0.25
EXOSC3-201ENST00000327304 C11orf72Q8NBR9 251 aa13.51□□□□□ -0.25
EXOSC3-201ENST00000327304 AZU1P20160 251 aa13.5□□□□□ -0.25
EXOSC3-201ENST00000327304 RPL32P62910 135 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-201ENST00000327304 SUMO4Q6EEV6 95 aa13.5□□□□□ -0.25
EXOSC3-201ENST00000327304 SPATA12Q7Z6I5 190 aa13.5□□□□□ -0.25
EXOSC3-201ENST00000327304 C20orf202A1L168 122 aa13.5□□□□□ -0.25
EXOSC3-201ENST00000327304 RPL39LQ96EH5 51 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-201ENST00000327304 VAMP8Q9BV40 100 aa13.5□□□□□ -0.25
EXOSC3-201ENST00000327304 LAGE3Q14657 143 aa13.49□□□□□ -0.25
EXOSC3-201ENST00000327304 RNF183Q96D59 192 aa13.49□□□□□ -0.25
EXOSC3-201ENST00000327304 NDUFAF3Q9BU61 184 aa13.49□□□□□ -0.25
EXOSC3-201ENST00000327304 X6R8D5 127 aa13.49□□□□□ -0.25
EXOSC3-201ENST00000327304 MEGF8Q7Z7M0 2845 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms