RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 NTN5Q8WTR8 489 aaPredicted RBP12.7□□□□□ -0.38
SFXN1-201ENST00000321442 PTH2Q96A98 100 aa12.7□□□□□ -0.38
SFXN1-201ENST00000321442 UBE2E2Q96LR5 201 aa12.7□□□□□ -0.38
SFXN1-201ENST00000321442 ADGRG4Q8IZF6 3080 aa12.69□□□□□ -0.38
SFXN1-201ENST00000321442 USMG5Q96IX5 58 aa12.69□□□□□ -0.38
SFXN1-201ENST00000321442 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
SFXN1-201ENST00000321442 IGKV2D-26A0A0A0MRZ7 120 aa12.69□□□□□ -0.38
SFXN1-201ENST00000321442 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
SFXN1-201ENST00000321442 FAM223BA6NKX1 122 aa12.69□□□□□ -0.38
SFXN1-201ENST00000321442 FAM223AQ8IWN6 122 aa12.69□□□□□ -0.38
SFXN1-201ENST00000321442 ATMQ13315 3056 aa12.69□□□□□ -0.38
SFXN1-201ENST00000321442 IGHV4-38-2P0DP08 117 aa12.68□□□□□ -0.38
SFXN1-201ENST00000321442 CRIP1P50238 77 aa12.68□□□□□ -0.38
SFXN1-201ENST00000321442 FANCD2OSQ96PS1 177 aa12.68□□□□□ -0.38
SFXN1-201ENST00000321442 DEFB131AP59861 70 aa12.68□□□□□ -0.38
SFXN1-201ENST00000321442 CPAMD8Q8IZJ3 1885 aa12.68□□□□□ -0.38
SFXN1-201ENST00000321442 LINC00158P58513 81 aa12.68□□□□□ -0.38
SFXN1-201ENST00000321442 PRIMA1Q86XR5 153 aa12.68□□□□□ -0.38
SFXN1-201ENST00000321442 C20orf78Q9BR46 151 aa12.67□□□□□ -0.38
SFXN1-201ENST00000321442 NSUN5P1Q3KNT7 163 aa12.67□□□□□ -0.38
SFXN1-201ENST00000321442 C11orf68Q9H3H3 251 aaKnown RBP12.67□□□□□ -0.38
SFXN1-201ENST00000321442 TRGV1A0A0A0MS02 117 aa12.67□□□□□ -0.38
SFXN1-201ENST00000321442 RPL39P62891 51 aaKnown RBP12.67□□□□□ -0.38
SFXN1-201ENST00000321442 J3QKU1 62 aa12.66□□□□□ -0.38
SFXN1-201ENST00000321442 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
SFXN1-201ENST00000321442 STHQ8IWL8 128 aa12.66□□□□□ -0.38
SFXN1-201ENST00000321442 NDUFA12Q9UI09 145 aa12.66□□□□□ -0.38
SFXN1-201ENST00000321442 COL12A1Q99715 3063 aa12.66□□□□□ -0.38
SFXN1-201ENST00000321442 IGHV1-69DA0A0B4J2H0 117 aa12.66□□□□□ -0.38
SFXN1-201ENST00000321442 WI2-2373I1.2A0A1W2PRP0 233 aa12.66□□□□□ -0.38
SFXN1-201ENST00000321442 IGHV1-69P01742 117 aa12.66□□□□□ -0.38
SFXN1-201ENST00000321442 MORN3Q6PF18 240 aaPredicted RBP12.66□□□□□ -0.38
SFXN1-201ENST00000321442 B5MCH6 92 aa12.65□□□□□ -0.38
SFXN1-201ENST00000321442 PF4P02776 101 aa12.65□□□□□ -0.38
SFXN1-201ENST00000321442 BLCAPP62952 87 aa12.65□□□□□ -0.38
SFXN1-201ENST00000321442 USP24Q9UPU5 2620 aa12.65□□□□□ -0.38
SFXN1-201ENST00000321442 TMEM141Q96I45 108 aa12.65□□□□□ -0.38
SFXN1-201ENST00000321442 CHCHD5Q9BSY4 110 aa12.65□□□□□ -0.38
SFXN1-201ENST00000321442 HIGD1BQ9P298 99 aa12.65□□□□□ -0.38
SFXN1-201ENST00000321442 COL4A2P08572 1712 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 H3BMM0 161 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 ZNF493Q6ZR52 646 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 UBE2WQ96B02 151 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 URB1-AS1Q96HZ7 61 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 IGHV4-59P01825 116 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 MYCNOSP40205 109 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 LINC01356Q8N9X3 169 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 C2orf91Q6ZV80 131 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 GATD1Q8NB37 220 aa12.64□□□□□ -0.39
SFXN1-201ENST00000321442 C1QTNF4Q9BXJ3 329 aa12.63□□□□□ -0.39
SFXN1-201ENST00000321442 LINC00574Q9H8X3 128 aa12.63□□□□□ -0.39
SFXN1-201ENST00000321442 A4D1N5 150 aa12.63□□□□□ -0.39
SFXN1-201ENST00000321442 PAX4O43316 350 aa12.63□□□□□ -0.39
SFXN1-201ENST00000321442 SPAG8Q99932 426 aaPredicted RBP12.63□□□□□ -0.39
SFXN1-201ENST00000321442 NDUFA4O00483 81 aa12.63□□□□□ -0.39
SFXN1-201ENST00000321442 CFC1BP0CG36 223 aa12.63□□□□□ -0.39
SFXN1-201ENST00000321442 CFC1P0CG37 223 aa12.63□□□□□ -0.39
SFXN1-201ENST00000321442 ADAMTS20P59510 1910 aa12.62□□□□□ -0.39
SFXN1-201ENST00000321442 IGHV1OR15-1A0A075B7D0 117 aa12.62□□□□□ -0.39
SFXN1-201ENST00000321442 Q8N9W7 124 aa12.62□□□□□ -0.39
SFXN1-201ENST00000321442 PRORYQ9H606 182 aa12.62□□□□□ -0.39
SFXN1-201ENST00000321442 TRGV4A0A0C4DH28 118 aa12.62□□□□□ -0.39
SFXN1-201ENST00000321442 A0A0J9YXV3 536 aa12.62□□□□□ -0.39
SFXN1-201ENST00000321442 I3L3M4 83 aa12.62□□□□□ -0.39
SFXN1-201ENST00000321442 EXPH5Q8NEV8 1989 aa12.62□□□□□ -0.39
SFXN1-201ENST00000321442 AGRNO00468 2067 aa12.62□□□□□ -0.39
SFXN1-201ENST00000321442 XCL2Q9UBD3 114 aa12.61□□□□□ -0.39
SFXN1-201ENST00000321442 NPBQ8NG41 125 aa12.61□□□□□ -0.39
SFXN1-201ENST00000321442 PEMTQ9UBM1 199 aa12.61□□□□□ -0.39
SFXN1-201ENST00000321442 JPT2Q9H910 190 aa12.61□□□□□ -0.39
SFXN1-201ENST00000321442 HELZ2Q9BYK8 2649 aaKnown RBP12.61□□□□□ -0.39
SFXN1-201ENST00000321442 HOXB4P17483 251 aaPredicted RBP12.61□□□□□ -0.39
SFXN1-201ENST00000321442 RPL36AP83881 106 aaKnown RBP12.61□□□□□ -0.39
SFXN1-201ENST00000321442 RPL36ALQ969Q0 106 aaKnown RBP12.61□□□□□ -0.39
SFXN1-201ENST00000321442 IGLV2-11P01706 119 aa12.6□□□□□ -0.39
SFXN1-201ENST00000321442 ZNF415Q09FC8 603 aa12.6□□□□□ -0.39
SFXN1-201ENST00000321442 HIST2H2BDQ6DRA6 164 aa12.6□□□□□ -0.39
SFXN1-201ENST00000321442 GAGE2AQ6NT46 116 aa12.6□□□□□ -0.39
SFXN1-201ENST00000321442 CENPVL3A0A0U1RRI6 287 aa12.6□□□□□ -0.39
SFXN1-201ENST00000321442 C11orf86A6NJI1 115 aa12.6□□□□□ -0.39
SFXN1-201ENST00000321442 GAS8-AS1O95177 125 aa12.6□□□□□ -0.39
SFXN1-201ENST00000321442 DEFB112Q30KQ8 113 aa12.6□□□□□ -0.39
SFXN1-201ENST00000321442 MAPKAPK5-AS1Q8N8E1 139 aa12.6□□□□□ -0.39
SFXN1-201ENST00000321442 RBAKDNA6NC62 111 aa12.59□□□□□ -0.39
SFXN1-201ENST00000321442 FOXI1Q12951 378 aa12.59□□□□□ -0.39
SFXN1-201ENST00000321442 SS18L2Q9UHA2 77 aa12.59□□□□□ -0.39
SFXN1-201ENST00000321442 CRPP02741 224 aa12.59□□□□□ -0.39
SFXN1-201ENST00000321442 C15orf53Q8NAA6 179 aa12.59□□□□□ -0.39
SFXN1-201ENST00000321442 TET2Q6N021 2002 aaPredicted RBP12.59□□□□□ -0.39
SFXN1-201ENST00000321442 TRAV26-1A0A087WT03 109 aa12.59□□□□□ -0.39
SFXN1-201ENST00000321442 BAALCQ8WXS3 180 aa12.59□□□□□ -0.39
SFXN1-201ENST00000321442 ZFP2Q6ZN57 461 aa12.58□□□□□ -0.39
SFXN1-201ENST00000321442 RS1O15537 224 aa12.58□□□□□ -0.4
SFXN1-201ENST00000321442 LGALS1P09382 135 aaKnown RBP12.58□□□□□ -0.4
SFXN1-201ENST00000321442 CARD19Q96LW7 228 aa12.58□□□□□ -0.4
SFXN1-201ENST00000321442 IGHV7-4-1A0A0J9YVY3 117 aa12.58□□□□□ -0.4
SFXN1-201ENST00000321442 HTN3P15516 51 aa12.58□□□□□ -0.4
SFXN1-201ENST00000321442 DSCR9P59020 149 aa12.58□□□□□ -0.4
SFXN1-201ENST00000321442 HIST1H4AP62805 103 aaKnown RBP12.58□□□□□ -0.4
SFXN1-201ENST00000321442 TEN1Q86WV5 123 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms