RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ANK2Q01484 3957 aa12.66□□□□□ -0.38
KRT28-201ENST00000306658 A0A087WWL8 130 aa12.66□□□□□ -0.38
KRT28-201ENST00000306658 SAMD5Q5TGI4 173 aa12.66□□□□□ -0.38
KRT28-201ENST00000306658 NIT1Q86X76 327 aa12.66□□□□□ -0.38
KRT28-201ENST00000306658 POM121L12Q8N7R1 296 aa12.66□□□□□ -0.38
KRT28-201ENST00000306658 IL17DQ8TAD2 202 aa12.66□□□□□ -0.38
KRT28-201ENST00000306658 CMYA5Q8N3K9 4069 aa12.66□□□□□ -0.38
KRT28-201ENST00000306658 TRAV26-2A0A0B4J265 109 aa12.65□□□□□ -0.38
KRT28-201ENST00000306658 NUPR1O60356 82 aa12.65□□□□□ -0.38
KRT28-201ENST00000306658 TNFRSF6BO95407 300 aa12.65□□□□□ -0.38
KRT28-201ENST00000306658 NPYP01303 97 aa12.65□□□□□ -0.38
KRT28-201ENST00000306658 CRYGDP07320 174 aa12.65□□□□□ -0.38
KRT28-201ENST00000306658 LINC00310P59036 64 aa12.65□□□□□ -0.38
KRT28-201ENST00000306658 LINC00315P59091 139 aa12.65□□□□□ -0.38
KRT28-201ENST00000306658 FAM74A4Q5TZK3 123 aa12.65□□□□□ -0.38
KRT28-201ENST00000306658 RASL10AQ92737 203 aa12.65□□□□□ -0.38
KRT28-201ENST00000306658 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 F5H697 171 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 DAZ2Q13117 558 aaKnown RBP12.64□□□□□ -0.39
KRT28-201ENST00000306658 LURAP1LQ8IV03 231 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 PRSS3P2Q8NHM4 247 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 TMEM18Q96B42 140 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 A8MZ25 164 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 PPP1R17O96001 155 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 LINC00614P0C842 121 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 LGALS9BQ3B8N2 356 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 RNASEKQ6P5S7 137 aaKnown RBP12.64□□□□□ -0.39
KRT28-201ENST00000306658 CHCHD1Q96BP2 118 aaKnown RBP12.64□□□□□ -0.39
KRT28-201ENST00000306658 SAMD10Q9BYL1 202 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 MAP1LC3AQ9H492 121 aa12.64□□□□□ -0.39
KRT28-201ENST00000306658 MRPL16Q9NX20 251 aaKnown RBP12.64□□□□□ -0.39
KRT28-201ENST00000306658 IFITM10A6NMD0 228 aa12.63□□□□□ -0.39
KRT28-201ENST00000306658 GAS8-AS1O95177 125 aa12.63□□□□□ -0.39
KRT28-201ENST00000306658 FABP4P15090 132 aa12.63□□□□□ -0.39
KRT28-201ENST00000306658 GATA1P15976 413 aaPredicted RBP12.63□□□□□ -0.39
KRT28-201ENST00000306658 AKR1D1P51857 326 aa12.63□□□□□ -0.39
KRT28-201ENST00000306658 HIST1H2BLQ99880 126 aa12.63□□□□□ -0.39
KRT28-201ENST00000306658 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
KRT28-201ENST00000306658 LOC389332A0A1B0GUA5 103 aa12.62□□□□□ -0.39
KRT28-201ENST00000306658 HSBP1O75506 76 aa12.62□□□□□ -0.39
KRT28-201ENST00000306658 ZNF56Q15929 161 aa12.62□□□□□ -0.39
KRT28-201ENST00000306658 DEFB135Q30KP9 77 aa12.62□□□□□ -0.39
KRT28-201ENST00000306658 NRACQ8N912 160 aa12.62□□□□□ -0.39
KRT28-201ENST00000306658 NOP10Q9NPE3 64 aaKnown RBP12.62□□□□□ -0.39
KRT28-201ENST00000306658 Q6ZWC4 215 aa12.61□□□□□ -0.39
KRT28-201ENST00000306658 FA2HQ7L5A8 372 aa12.61□□□□□ -0.39
KRT28-201ENST00000306658 PLAC8L1A1L4L8 177 aa12.61□□□□□ -0.39
KRT28-201ENST00000306658 RHODO00212 210 aa12.61□□□□□ -0.39
KRT28-201ENST00000306658 IFI27P40305 119 aaPredicted RBP12.61□□□□□ -0.39
KRT28-201ENST00000306658 CFAP126Q5VTH2 177 aa12.61□□□□□ -0.39
KRT28-201ENST00000306658 SUMO4Q6EEV6 95 aa12.61□□□□□ -0.39
KRT28-201ENST00000306658 URB1-AS1Q96HZ7 61 aa12.61□□□□□ -0.39
KRT28-201ENST00000306658 OVOL2Q9BRP0 275 aa12.61□□□□□ -0.39
KRT28-201ENST00000306658 X6R8D5 127 aa12.61□□□□□ -0.39
KRT28-201ENST00000306658 PRSS47A8MTI9 375 aa12.6□□□□□ -0.39
KRT28-201ENST00000306658 RS1O15537 224 aa12.6□□□□□ -0.39
KRT28-201ENST00000306658 PACRGQ96M98 296 aaPredicted RBP12.6□□□□□ -0.39
KRT28-201ENST00000306658 C20orf78Q9BR46 151 aa12.6□□□□□ -0.39
KRT28-201ENST00000306658 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
KRT28-201ENST00000306658 AP5S1Q9NUS5 200 aa12.6□□□□□ -0.39
KRT28-201ENST00000306658 AMTP48728 403 aa12.59□□□□□ -0.39
KRT28-201ENST00000306658 Q6ZTI0 123 aa12.59□□□□□ -0.39
KRT28-201ENST00000306658 PMCHP20382 165 aa12.58□□□□□ -0.4
KRT28-201ENST00000306658 UFSP1Q6NVU6 142 aa12.58□□□□□ -0.4
KRT28-201ENST00000306658 ZFP2Q6ZN57 461 aa12.58□□□□□ -0.4
KRT28-201ENST00000306658 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
KRT28-201ENST00000306658 RNF183Q96D59 192 aa12.58□□□□□ -0.4
KRT28-201ENST00000306658 H7C1H1 209 aa12.57□□□□□ -0.4
KRT28-201ENST00000306658 RIPPLY3P57055 190 aa12.57□□□□□ -0.4
KRT28-201ENST00000306658 SUMO2P61956 95 aaKnown RBP12.57□□□□□ -0.4
KRT28-201ENST00000306658 OR4C5Q8NGB2 326 aa12.57□□□□□ -0.4
KRT28-201ENST00000306658 OR10D4PQ8NGN7 298 aa12.57□□□□□ -0.4
KRT28-201ENST00000306658 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
KRT28-201ENST00000306658 IGHV3-73A0A0B4J1V6 119 aa12.57□□□□□ -0.4
KRT28-201ENST00000306658 M0QY20 66 aa12.57□□□□□ -0.4
KRT28-201ENST00000306658 EMP1P54849 157 aa12.57□□□□□ -0.4
KRT28-201ENST00000306658 FAM19A2Q8N3H0 131 aa12.57□□□□□ -0.4
KRT28-201ENST00000306658 Q8N8P6 123 aa12.57□□□□□ -0.4
KRT28-201ENST00000306658 EDA2RQ9HAV5 297 aa12.56□□□□□ -0.4
KRT28-201ENST00000306658 ST20Q9HBF5 79 aa12.56□□□□□ -0.4
KRT28-201ENST00000306658 NBEAL2Q6ZNJ1 2754 aa12.56□□□□□ -0.4
KRT28-201ENST00000306658 NOTCH1P46531 2555 aa12.55□□□□□ -0.4
KRT28-201ENST00000306658 NACAE9PAV3 2078 aa12.55□□□□□ -0.4
KRT28-201ENST00000306658 TRGV2A0A075B6R0 118 aa12.55□□□□□ -0.4
KRT28-201ENST00000306658 TRAV4A0A0B4J268 109 aa12.55□□□□□ -0.4
KRT28-201ENST00000306658 MIFP14174 115 aa12.55□□□□□ -0.4
KRT28-201ENST00000306658 GAGE12BA1L429 117 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 CIDEAO60543 219 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 GAGE7O76087 117 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 GAGE12FP0CL80 117 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 GAGE12GP0CL81 117 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 GAGE12IP0CL82 117 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 SMIM2Q9BVW6 85 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 NIT2Q9NQR4 276 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 IGLV2-18A0A075B6J9 118 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 IGHV1-24A0A0C4DH33 117 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 TRBV6-5A0A0K0K1A5 114 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
KRT28-201ENST00000306658 MGAM2Q2M2H8 2515 aa12.53□□□□□ -0.4
KRT28-201ENST00000306658 IGHV3-53P01767 116 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms