RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 RPL39LQ96EH5 51 aaKnown RBP16.26■□□□□ 0.19
SMAD1-201ENST00000302085 ZNF747Q9BV97 191 aa16.26■□□□□ 0.19
SMAD1-201ENST00000302085 SYS1-DBNDD2H3BUS1 97 aa16.26■□□□□ 0.19
SMAD1-201ENST00000302085 ZNF876PQ49A33 203 aa16.26■□□□□ 0.19
SMAD1-201ENST00000302085 LINC00587B1AMM8 73 aa16.25■□□□□ 0.19
SMAD1-201ENST00000302085 CRYGDP07320 174 aa16.25■□□□□ 0.19
SMAD1-201ENST00000302085 C1orf158Q8N1D5 194 aa16.25■□□□□ 0.19
SMAD1-201ENST00000302085 NIPBLQ6KC79 2804 aaeCLIP16.25■□□□□ 0.19
SMAD1-201ENST00000302085 CYSRT1A8MQ03 144 aa16.24■□□□□ 0.19
SMAD1-201ENST00000302085 HBDP02042 147 aa16.24■□□□□ 0.19
SMAD1-201ENST00000302085 MAP1LC3CQ9BXW4 147 aa16.24■□□□□ 0.19
SMAD1-201ENST00000302085 NUTF2P61970 127 aaKnown RBP16.23■□□□□ 0.19
SMAD1-201ENST00000302085 SUMO4Q6EEV6 95 aa16.23■□□□□ 0.19
SMAD1-201ENST00000302085 C20orf78Q9BR46 151 aa16.23■□□□□ 0.19
SMAD1-201ENST00000302085 TSTD3H0UI37 97 aa16.22■□□□□ 0.19
SMAD1-201ENST00000302085 GIG44P09565 113 aaPredicted RBP16.22■□□□□ 0.19
SMAD1-201ENST00000302085 FCER1GP30273 86 aa16.22■□□□□ 0.19
SMAD1-201ENST00000302085 C11orf72Q8NBR9 251 aa16.22■□□□□ 0.19
SMAD1-201ENST00000302085 SUMO2P61956 95 aaKnown RBP16.22■□□□□ 0.19
SMAD1-201ENST00000302085 SMIM2Q9BVW6 85 aa16.22■□□□□ 0.19
SMAD1-201ENST00000302085 F5H697 171 aa16.21■□□□□ 0.19
SMAD1-201ENST00000302085 ZNF415Q09FC8 603 aa16.21■□□□□ 0.19
SMAD1-201ENST00000302085 FAM74A4Q5TZK3 123 aa16.21■□□□□ 0.19
SMAD1-201ENST00000302085 ATOH7Q8N100 152 aa16.21■□□□□ 0.19
SMAD1-201ENST00000302085 JMJD1CQ15652 2540 aa16.2■□□□□ 0.18
SMAD1-201ENST00000302085 TCAPO15273 167 aa16.2■□□□□ 0.18
SMAD1-201ENST00000302085 PET117Q6UWS5 81 aa16.2■□□□□ 0.18
SMAD1-201ENST00000302085 VAMP8Q9BV40 100 aa16.2■□□□□ 0.18
SMAD1-201ENST00000302085 M0R2P5 195 aa16.2■□□□□ 0.18
SMAD1-201ENST00000302085 PPP1R17O96001 155 aa16.2■□□□□ 0.18
SMAD1-201ENST00000302085 RPL35AP18077 110 aaKnown RBP16.2■□□□□ 0.18
SMAD1-201ENST00000302085 AZU1P20160 251 aa16.2■□□□□ 0.18
SMAD1-201ENST00000302085 PAM16Q9Y3D7 125 aa16.2■□□□□ 0.18
SMAD1-201ENST00000302085 KIR2DL5BA0A0G2JN68 375 aa16.19■□□□□ 0.18
SMAD1-201ENST00000302085 KIR2DL5BA0A0G2JPC4 375 aa16.19■□□□□ 0.18
SMAD1-201ENST00000302085 LAGE3Q14657 143 aa16.19■□□□□ 0.18
SMAD1-201ENST00000302085 KIR2DL5AQ8N109 375 aa16.19■□□□□ 0.18
SMAD1-201ENST00000302085 TMEM208Q9BTX3 173 aa16.19■□□□□ 0.18
SMAD1-201ENST00000302085 MCRIP2Q9BUT9 160 aaKnown RBP16.19■□□□□ 0.18
SMAD1-201ENST00000302085 INSL3P51460 131 aa16.18■□□□□ 0.18
SMAD1-201ENST00000302085 TMEM158Q8WZ71 300 aa16.18■□□□□ 0.18
SMAD1-201ENST00000302085 PTH2Q96A98 100 aa16.18■□□□□ 0.18
SMAD1-201ENST00000302085 TENM1Q9UKZ4 2725 aa16.18■□□□□ 0.18
SMAD1-201ENST00000302085 IGHV3OR16-12A0A075B7B8 117 aa16.18■□□□□ 0.18
SMAD1-201ENST00000302085 C9orf66Q5T8R8 295 aa16.18■□□□□ 0.18
SMAD1-201ENST00000302085 H0Y8G0 127 aa16.17■□□□□ 0.18
SMAD1-201ENST00000302085 DDTP30046 118 aa16.17■□□□□ 0.18
SMAD1-201ENST00000302085 ZNF56Q15929 161 aa16.16■□□□□ 0.18
SMAD1-201ENST00000302085 MAJINQ3KP22 176 aa16.16■□□□□ 0.18
SMAD1-201ENST00000302085 SPXQ9BT56 116 aa16.16■□□□□ 0.18
SMAD1-201ENST00000302085 BAHCC1Q9P281 2608 aa16.15■□□□□ 0.18
SMAD1-201ENST00000302085 M0QY20 66 aa16.15■□□□□ 0.18
SMAD1-201ENST00000302085 PIK3CD-AS1Q5SR53 167 aa16.15■□□□□ 0.18
SMAD1-201ENST00000302085 LINC01545Q5VT33 79 aa16.15■□□□□ 0.18
SMAD1-201ENST00000302085 IFI27L1Q96BM0 104 aa16.15■□□□□ 0.18
SMAD1-201ENST00000302085 CSTL1Q9H114 145 aa16.15■□□□□ 0.18
SMAD1-201ENST00000302085 ST20Q9HBF5 79 aa16.15■□□□□ 0.18
SMAD1-201ENST00000302085 C20orf202A1L168 122 aa16.15■□□□□ 0.18
SMAD1-201ENST00000302085 MORN3Q6PF18 240 aaPredicted RBP16.15■□□□□ 0.18
SMAD1-201ENST00000302085 ATRQ13535 2644 aa16.14■□□□□ 0.17
SMAD1-201ENST00000302085 TEP1Q99973 2627 aaKnown RBP16.14■□□□□ 0.17
SMAD1-201ENST00000302085 POLR2KP53803 58 aaKnown RBP16.13■□□□□ 0.17
SMAD1-201ENST00000302085 RPL32P62910 135 aaKnown RBP16.13■□□□□ 0.17
SMAD1-201ENST00000302085 SPATA45Q537H7 98 aa16.13■□□□□ 0.17
SMAD1-201ENST00000302085 UFSP1Q6NVU6 142 aa16.13■□□□□ 0.17
SMAD1-201ENST00000302085 C18orf15Q96N68 181 aa16.13■□□□□ 0.17
SMAD1-201ENST00000302085 PMCHL2Q9BQD1 86 aa16.13■□□□□ 0.17
SMAD1-201ENST00000302085 TRAV9-2A0A087WT02 112 aa16.13■□□□□ 0.17
SMAD1-201ENST00000302085 NEGR1Q7Z3B1 354 aa16.13■□□□□ 0.17
SMAD1-201ENST00000302085 CSNK1G2-AS1Q8NCQ2 148 aa16.13■□□□□ 0.17
SMAD1-201ENST00000302085 MRPL16Q9NX20 251 aaKnown RBP16.13■□□□□ 0.17
SMAD1-201ENST00000302085 TRBV6-5A0A0K0K1A5 114 aa16.12■□□□□ 0.17
SMAD1-201ENST00000302085 A8MWV9 139 aa16.12■□□□□ 0.17
SMAD1-201ENST00000302085 KRTAP24-1Q3LI83 254 aa16.12■□□□□ 0.17
SMAD1-201ENST00000302085 IL17DQ8TAD2 202 aa16.12■□□□□ 0.17
SMAD1-201ENST00000302085 IGHV3-73A0A0B4J1V6 119 aa16.11■□□□□ 0.17
SMAD1-201ENST00000302085 ZNF705AQ6ZN79 300 aaPredicted RBP16.11■□□□□ 0.17
SMAD1-201ENST00000302085 RNASE8Q8TDE3 154 aaKnown RBP16.11■□□□□ 0.17
SMAD1-201ENST00000302085 K7EMI3 77 aa16.11■□□□□ 0.17
SMAD1-201ENST00000302085 NUDT3O95989 172 aa16.11■□□□□ 0.17
SMAD1-201ENST00000302085 ORMDL2Q53FV1 153 aa16.11■□□□□ 0.17
SMAD1-201ENST00000302085 CFAP126Q5VTH2 177 aa16.11■□□□□ 0.17
SMAD1-201ENST00000302085 GTSCR1Q86UQ5 136 aa16.11■□□□□ 0.17
SMAD1-201ENST00000302085 WFDC9Q8NEX5 89 aa16.11■□□□□ 0.17
SMAD1-201ENST00000302085 GOLT1BQ9Y3E0 138 aa16.11■□□□□ 0.17
SMAD1-201ENST00000302085 NOTCH3Q9UM47 2321 aa16.1■□□□□ 0.17
SMAD1-201ENST00000302085 C1QTNF4Q9BXJ3 329 aa16.1■□□□□ 0.17
SMAD1-201ENST00000302085 VWFP04275 2813 aa16.09■□□□□ 0.17
SMAD1-201ENST00000302085 SDHAF1A6NFY7 115 aa16.09■□□□□ 0.17
SMAD1-201ENST00000302085 VCYO14598 125 aa16.09■□□□□ 0.17
SMAD1-201ENST00000302085 RS1O15537 224 aa16.07■□□□□ 0.16
SMAD1-201ENST00000302085 IGLL1P15814 213 aa16.07■□□□□ 0.16
SMAD1-201ENST00000302085 LGALS9BQ3B8N2 356 aa16.07■□□□□ 0.16
SMAD1-201ENST00000302085 LGALS9CQ6DKI2 356 aa16.07■□□□□ 0.16
SMAD1-201ENST00000302085 Q6ZSN1 163 aa16.07■□□□□ 0.16
SMAD1-201ENST00000302085 TMEM263Q8WUH6 116 aaKnown RBP16.07■□□□□ 0.16
SMAD1-201ENST00000302085 MIEN1Q9BRT3 115 aa16.07■□□□□ 0.16
SMAD1-201ENST00000302085 EDA2RQ9HAV5 297 aa16.07■□□□□ 0.16
SMAD1-201ENST00000302085 NACAE9PAV3 2078 aa16.07■□□□□ 0.16
SMAD1-201ENST00000302085 TRBV27A0A0K0K1C4 114 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms