RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 TSSC4Q9Y5U2 329 aaPredicted RBP16.08■□□□□ 0.16
LTBP3-201ENST00000301873 PSCAO43653 123 aa16.07■□□□□ 0.16
LTBP3-201ENST00000301873 C16orf54Q6UWD8 224 aa16.07■□□□□ 0.16
LTBP3-201ENST00000301873 SPAG8Q99932 426 aaPredicted RBP16.07■□□□□ 0.16
LTBP3-201ENST00000301873 K7EP34 96 aa16.06■□□□□ 0.16
LTBP3-201ENST00000301873 C12orf74Q32Q52 190 aa16.06■□□□□ 0.16
LTBP3-201ENST00000301873 C1orf229Q6ZS94 237 aaPredicted RBP16.06■□□□□ 0.16
LTBP3-201ENST00000301873 ZNF561-AS1K7EIQ3 104 aa16.06■□□□□ 0.16
LTBP3-201ENST00000301873 ANGP03950 147 aaKnown RBP16.06■□□□□ 0.16
LTBP3-201ENST00000301873 IGKV1D-37A0A075B6S9 117 aa16.05■□□□□ 0.16
LTBP3-201ENST00000301873 WI2-2373I1.2A0A1W2PRP0 233 aa16.05■□□□□ 0.16
LTBP3-201ENST00000301873 OBSL1O75147 1896 aa16.05■□□□□ 0.16
LTBP3-201ENST00000301873 A0A0J9YXV3 536 aa16.04■□□□□ 0.16
LTBP3-201ENST00000301873 UNQ9165/PRO28630Q6UXU0 137 aa16.03■□□□□ 0.16
LTBP3-201ENST00000301873 A0A0J9YY99 117 aa16.03■□□□□ 0.16
LTBP3-201ENST00000301873 DNAJC30Q96LL9 226 aa16.03■□□□□ 0.16
LTBP3-201ENST00000301873 DEFB113Q30KQ7 82 aa16.03■□□□□ 0.16
LTBP3-201ENST00000301873 K7EMI3 77 aa16.03■□□□□ 0.16
LTBP3-201ENST00000301873 FBXL19-AS1Q494R0 122 aa16.03■□□□□ 0.16
LTBP3-201ENST00000301873 LINC01545Q5VT33 79 aa16.03■□□□□ 0.16
LTBP3-201ENST00000301873 SIVA1O15304 175 aa16.02■□□□□ 0.16
LTBP3-201ENST00000301873 SRSF2Q01130 221 aaKnown RBP16.02■□□□□ 0.16
LTBP3-201ENST00000301873 SUMO4Q6EEV6 95 aa16.02■□□□□ 0.16
LTBP3-201ENST00000301873 DEFB125Q8N687 156 aa16.02■□□□□ 0.16
LTBP3-201ENST00000301873 TAL2Q16559 108 aa16.02■□□□□ 0.16
LTBP3-201ENST00000301873 KIAA1549Q9HCM3 1950 aa16.02■□□□□ 0.15
LTBP3-201ENST00000301873 PPDPFLQ8WWR9 84 aa16.02■□□□□ 0.15
LTBP3-201ENST00000301873 LTBP2Q14767 1821 aa16.02■□□□□ 0.15
LTBP3-201ENST00000301873 F8W1H4 67 aa16.01■□□□□ 0.15
LTBP3-201ENST00000301873 H3BMM0 161 aa16.01■□□□□ 0.15
LTBP3-201ENST00000301873 TRBV12-3P01733 135 aa16.01■□□□□ 0.15
LTBP3-201ENST00000301873 UBE2WQ96B02 151 aa16.01■□□□□ 0.15
LTBP3-201ENST00000301873 LINC01548A6NM66 108 aa16.01■□□□□ 0.15
LTBP3-201ENST00000301873 HERVK_113P63121 156 aa16.01■□□□□ 0.15
LTBP3-201ENST00000301873 LINC00322Q6ZN03 302 aaPredicted RBP16.01■□□□□ 0.15
LTBP3-201ENST00000301873 IGHV4OR15-8A0A075B7B6 117 aa16■□□□□ 0.15
LTBP3-201ENST00000301873 A0A087WW49 117 aa16■□□□□ 0.15
LTBP3-201ENST00000301873 RHOHQ15669 191 aa16■□□□□ 0.15
LTBP3-201ENST00000301873 Q8N1Y9 231 aa16■□□□□ 0.15
LTBP3-201ENST00000301873 XCL1P47992 114 aa16■□□□□ 0.15
LTBP3-201ENST00000301873 RPL39P62891 51 aaKnown RBP16■□□□□ 0.15
LTBP3-201ENST00000301873 C5orf38Q86SI9 138 aa16■□□□□ 0.15
LTBP3-201ENST00000301873 SIRPDQ9H106 197 aa16■□□□□ 0.15
LTBP3-201ENST00000301873 TMEM131Q92545 1883 aa16■□□□□ 0.15
LTBP3-201ENST00000301873 OVOL2Q9BRP0 275 aa16■□□□□ 0.15
LTBP3-201ENST00000301873 HCFC1P51610 2035 aa15.99■□□□□ 0.15
LTBP3-201ENST00000301873 Q9H8V8 135 aa15.99■□□□□ 0.15
LTBP3-201ENST00000301873 POLQO75417 2590 aa15.98■□□□□ 0.15
LTBP3-201ENST00000301873 ZFP2Q6ZN57 461 aa15.98■□□□□ 0.15
LTBP3-201ENST00000301873 IGHG2P01859 326 aa15.98■□□□□ 0.15
LTBP3-201ENST00000301873 APOC4P55056 127 aa15.97■□□□□ 0.15
LTBP3-201ENST00000301873 DAZAP2Q15038 168 aaPredicted RBP15.97■□□□□ 0.15
LTBP3-201ENST00000301873 PRO3102Q9H379 93 aa15.97■□□□□ 0.15
LTBP3-201ENST00000301873 C19orf71A6NCJ1 209 aa15.97■□□□□ 0.15
LTBP3-201ENST00000301873 LMO4P61968 165 aa15.97■□□□□ 0.15
LTBP3-201ENST00000301873 C2orf70A6NJV1 201 aa15.96■□□□□ 0.15
LTBP3-201ENST00000301873 CFC1BP0CG36 223 aa15.96■□□□□ 0.14
LTBP3-201ENST00000301873 CFC1P0CG37 223 aa15.96■□□□□ 0.14
LTBP3-201ENST00000301873 C9orf47Q6ZRZ4 202 aa15.96■□□□□ 0.14
LTBP3-201ENST00000301873 NTN5Q8WTR8 489 aaPredicted RBP15.96■□□□□ 0.14
LTBP3-201ENST00000301873 LINC00574Q9H8X3 128 aa15.95■□□□□ 0.14
LTBP3-201ENST00000301873 INAFM2P0DMQ5 153 aa15.95■□□□□ 0.14
LTBP3-201ENST00000301873 ESM1Q9NQ30 184 aa15.95■□□□□ 0.14
LTBP3-201ENST00000301873 EDA2RQ9HAV5 297 aa15.95■□□□□ 0.14
LTBP3-201ENST00000301873 SOCS3O14543 225 aa15.95■□□□□ 0.14
LTBP3-201ENST00000301873 IGLV2-8P01709 118 aa15.95■□□□□ 0.14
LTBP3-201ENST00000301873 CARD19Q96LW7 228 aa15.95■□□□□ 0.14
LTBP3-201ENST00000301873 ZNF80P51504 273 aaPredicted RBP15.94■□□□□ 0.14
LTBP3-201ENST00000301873 Q6ZQT7 251 aa15.94■□□□□ 0.14
LTBP3-201ENST00000301873 SCRT2Q9NQ03 307 aa15.94■□□□□ 0.14
LTBP3-201ENST00000301873 KIAA1549LQ6ZVL6 1849 aa15.94■□□□□ 0.14
LTBP3-201ENST00000301873 SH2D6Q7Z4S9 175 aa15.94■□□□□ 0.14
LTBP3-201ENST00000301873 FXYD2P54710 66 aa15.93■□□□□ 0.14
LTBP3-201ENST00000301873 TMEM61Q8N0U2 210 aa15.93■□□□□ 0.14
LTBP3-201ENST00000301873 CTRLP40313 264 aa15.93■□□□□ 0.14
LTBP3-201ENST00000301873 LOXL1Q08397 574 aaPredicted RBP15.93■□□□□ 0.14
LTBP3-201ENST00000301873 GPHB5Q86YW7 130 aa15.92■□□□□ 0.14
LTBP3-201ENST00000301873 MDFICQ9P1T7 246 aa15.91■□□□□ 0.14
LTBP3-201ENST00000301873 GAGE12HA6NDE8 117 aa15.91■□□□□ 0.14
LTBP3-201ENST00000301873 K7EMT4 169 aa15.91■□□□□ 0.14
LTBP3-201ENST00000301873 F8WEM9 126 aa15.91■□□□□ 0.14
LTBP3-201ENST00000301873 BOD1L2Q8IYS8 172 aa15.91■□□□□ 0.14
LTBP3-201ENST00000301873 A4D1N5 150 aa15.9■□□□□ 0.14
LTBP3-201ENST00000301873 PIFOQ8TCI5 191 aa15.9■□□□□ 0.14
LTBP3-201ENST00000301873 IGLV10-54A0A075B6I4 117 aa15.9■□□□□ 0.14
LTBP3-201ENST00000301873 HAMPP81172 84 aa15.9■□□□□ 0.14
LTBP3-201ENST00000301873 SPANXA1Q9NS26 97 aa15.9■□□□□ 0.14
LTBP3-201ENST00000301873 TNRC6AQ8NDV7 1962 aaKnown RBP15.89■□□□□ 0.14
LTBP3-201ENST00000301873 CCDC140Q96MF4 163 aa15.89■□□□□ 0.13
LTBP3-201ENST00000301873 C19orf84I3L1E1 186 aa15.89■□□□□ 0.13
LTBP3-201ENST00000301873 EIF4EBP1Q13541 118 aaPredicted RBP15.89■□□□□ 0.13
LTBP3-201ENST00000301873 TINCRA0A1B0GVN0 87 aa15.88■□□□□ 0.13
LTBP3-201ENST00000301873 IGLL5B9A064 214 aa15.88■□□□□ 0.13
LTBP3-201ENST00000301873 GDF5OSQ5U4N7 250 aa15.88■□□□□ 0.13
LTBP3-201ENST00000301873 TEX48A0A1B0GUV7 120 aa15.88■□□□□ 0.13
LTBP3-201ENST00000301873 TRAV13-2A0A0B4J235 113 aa15.88■□□□□ 0.13
LTBP3-201ENST00000301873 NKAPP1Q8N9T2 125 aa15.88■□□□□ 0.13
LTBP3-201ENST00000301873 MLST8Q9BVC4 326 aa15.87■□□□□ 0.13
LTBP3-201ENST00000301873 GYPEP15421 78 aa15.87■□□□□ 0.13
LTBP3-201ENST00000301873 RS1O15537 224 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms