RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 CSTL1Q9H114 145 aa11.25□□□□□ -0.61
CCDC116-201ENST00000292779 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
CCDC116-201ENST00000292779 TMEM89A2RUT3 159 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 MAPKAPK5-AS1Q8N8E1 139 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 CBY1Q9Y3M2 126 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 SETXQ7Z333 2677 aaKnown RBP11.24□□□□□ -0.61
CCDC116-201ENST00000292779 ANK3Q12955 4377 aaKnown RBP11.24□□□□□ -0.61
CCDC116-201ENST00000292779 GAGE10A6NGK3 116 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 PPP1R17O96001 155 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 FXYD2P54710 66 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 NEGR1Q7Z3B1 354 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 NEXN-AS1Q8NBZ9 246 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 VPREB3Q9UKI3 123 aa11.24□□□□□ -0.61
CCDC116-201ENST00000292779 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
CCDC116-201ENST00000292779 SYNJ2BPP57105 145 aa11.23□□□□□ -0.61
CCDC116-201ENST00000292779 NF1P21359 2839 aa11.23□□□□□ -0.61
CCDC116-201ENST00000292779 TRAV12-2A0A075B6T6 113 aa11.23□□□□□ -0.61
CCDC116-201ENST00000292779 RBX1P62877 108 aa11.23□□□□□ -0.61
CCDC116-201ENST00000292779 SORL1Q92673 2214 aa11.22□□□□□ -0.61
CCDC116-201ENST00000292779 A0A087WWL8 130 aa11.22□□□□□ -0.61
CCDC116-201ENST00000292779 A0A0J9YX75 114 aa11.22□□□□□ -0.61
CCDC116-201ENST00000292779 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
CCDC116-201ENST00000292779 K7EQG2 157 aa11.22□□□□□ -0.61
CCDC116-201ENST00000292779 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
CCDC116-201ENST00000292779 BAALCQ8WXS3 180 aa11.22□□□□□ -0.61
CCDC116-201ENST00000292779 CST9LQ9H4G1 147 aa11.22□□□□□ -0.61
CCDC116-201ENST00000292779 SUMO4Q6EEV6 95 aa11.21□□□□□ -0.61
CCDC116-201ENST00000292779 UFSP1Q6NVU6 142 aa11.21□□□□□ -0.61
CCDC116-201ENST00000292779 Q6YL49 198 aa11.21□□□□□ -0.61
CCDC116-201ENST00000292779 DUX5Q96PT3 197 aa11.21□□□□□ -0.61
CCDC116-201ENST00000292779 MTORP42345 2549 aa11.21□□□□□ -0.61
CCDC116-201ENST00000292779 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.62
CCDC116-201ENST00000292779 A0A087WW49 117 aa11.21□□□□□ -0.62
CCDC116-201ENST00000292779 FSHBP01225 129 aa11.21□□□□□ -0.62
CCDC116-201ENST00000292779 LGALS1P09382 135 aaKnown RBP11.21□□□□□ -0.62
CCDC116-201ENST00000292779 SMIM13P0DJ93 91 aa11.21□□□□□ -0.62
CCDC116-201ENST00000292779 ODF3Q96PU9 254 aa11.21□□□□□ -0.62
CCDC116-201ENST00000292779 GTF2H5Q6ZYL4 71 aa11.2□□□□□ -0.62
CCDC116-201ENST00000292779 DEFB104AQ8WTQ1 72 aa11.2□□□□□ -0.62
CCDC116-201ENST00000292779 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
CCDC116-201ENST00000292779 IGHV3-16A0A0C4DH30 117 aa11.2□□□□□ -0.62
CCDC116-201ENST00000292779 F5H697 171 aa11.2□□□□□ -0.62
CCDC116-201ENST00000292779 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
CCDC116-201ENST00000292779 CEND1Q8N111 149 aa11.2□□□□□ -0.62
CCDC116-201ENST00000292779 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
CCDC116-201ENST00000292779 PRSS29PA6NIE9 313 aa11.19□□□□□ -0.62
CCDC116-201ENST00000292779 K7EP34 96 aa11.19□□□□□ -0.62
CCDC116-201ENST00000292779 DUSP14O95147 198 aaKnown RBP11.19□□□□□ -0.62
CCDC116-201ENST00000292779 C9orf85Q96MD7 179 aa11.19□□□□□ -0.62
CCDC116-201ENST00000292779 BAHCC1Q9P281 2608 aa11.19□□□□□ -0.62
CCDC116-201ENST00000292779 A0A1W2PPM0 123 aa11.19□□□□□ -0.62
CCDC116-201ENST00000292779 K7ERJ3 54 aa11.19□□□□□ -0.62
CCDC116-201ENST00000292779 ELANEP08246 267 aa11.19□□□□□ -0.62
CCDC116-201ENST00000292779 HOXD3P31249 432 aaPredicted RBP11.19□□□□□ -0.62
CCDC116-201ENST00000292779 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
CCDC116-201ENST00000292779 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
CCDC116-201ENST00000292779 TM2D2Q9BX73 214 aa11.19□□□□□ -0.62
CCDC116-201ENST00000292779 LGALS9O00182 355 aa11.18□□□□□ -0.62
CCDC116-201ENST00000292779 RPL32P62910 135 aaKnown RBP11.18□□□□□ -0.62
CCDC116-201ENST00000292779 Q8N1Y9 231 aa11.18□□□□□ -0.62
CCDC116-201ENST00000292779 CDKN1BP46527 198 aa11.18□□□□□ -0.62
CCDC116-201ENST00000292779 OCIAD2Q56VL3 154 aa11.18□□□□□ -0.62
CCDC116-201ENST00000292779 FAM74A4Q5TZK3 123 aa11.18□□□□□ -0.62
CCDC116-201ENST00000292779 ZFP2Q6ZN57 461 aa11.18□□□□□ -0.62
CCDC116-201ENST00000292779 CYSLTR1Q9Y271 337 aa11.18□□□□□ -0.62
CCDC116-201ENST00000292779 HIVEP1P15822 2718 aa11.17□□□□□ -0.62
CCDC116-201ENST00000292779 OR11H12B2RN74 326 aa11.17□□□□□ -0.62
CCDC116-201ENST00000292779 KRTAP1-1Q07627 177 aa11.17□□□□□ -0.62
CCDC116-201ENST00000292779 OR11H1Q8NG94 326 aa11.17□□□□□ -0.62
CCDC116-201ENST00000292779 OR11H2Q8NH07 326 aa11.17□□□□□ -0.62
CCDC116-201ENST00000292779 UBE2E2Q96LR5 201 aa11.17□□□□□ -0.62
CCDC116-201ENST00000292779 NHP2Q9NX24 153 aaKnown RBP11.17□□□□□ -0.62
CCDC116-201ENST00000292779 TP53TG1Q9Y2A0 90 aa11.17□□□□□ -0.62
CCDC116-201ENST00000292779 TSHBP01222 138 aa11.16□□□□□ -0.62
CCDC116-201ENST00000292779 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
CCDC116-201ENST00000292779 SAMD5Q5TGI4 173 aa11.16□□□□□ -0.62
CCDC116-201ENST00000292779 PHLDA1Q8WV24 401 aaPredicted RBP11.16□□□□□ -0.62
CCDC116-201ENST00000292779 IGHV1OR15-1A0A075B7D0 117 aa11.16□□□□□ -0.62
CCDC116-201ENST00000292779 SDHAF1A6NFY7 115 aa11.16□□□□□ -0.62
CCDC116-201ENST00000292779 VCYO14598 125 aa11.16□□□□□ -0.62
CCDC116-201ENST00000292779 CRYGDP07320 174 aa11.16□□□□□ -0.62
CCDC116-201ENST00000292779 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
CCDC116-201ENST00000292779 MYMXA0A1B0GTQ4 84 aa11.15□□□□□ -0.62
CCDC116-201ENST00000292779 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
CCDC116-201ENST00000292779 TAL2Q16559 108 aa11.15□□□□□ -0.62
CCDC116-201ENST00000292779 SYT8Q8NBV8 401 aa11.15□□□□□ -0.62
CCDC116-201ENST00000292779 KIR2DL4Q99706 377 aa11.15□□□□□ -0.62
CCDC116-201ENST00000292779 IGIPA6NJ69 53 aa11.15□□□□□ -0.62
CCDC116-201ENST00000292779 FABP2P12104 132 aa11.15□□□□□ -0.62
CCDC116-201ENST00000292779 HIST1H4GQ99525 98 aa11.15□□□□□ -0.62
CCDC116-201ENST00000292779 E9PLD3 99 aa11.14□□□□□ -0.63
CCDC116-201ENST00000292779 ZNF56Q15929 161 aa11.14□□□□□ -0.63
CCDC116-201ENST00000292779 TCTEX1D4Q5JR98 221 aa11.14□□□□□ -0.63
CCDC116-201ENST00000292779 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
CCDC116-201ENST00000292779 TRBV27A0A0K0K1C4 114 aa11.14□□□□□ -0.63
CCDC116-201ENST00000292779 DEFB136Q30KP8 78 aa11.14□□□□□ -0.63
CCDC116-201ENST00000292779 AMTNQ6UX39 209 aa11.14□□□□□ -0.63
CCDC116-201ENST00000292779 FOXI2Q6ZQN5 318 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms