RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PF4V1P10720 104 aa9.81□□□□□ -0.84
SNX1-201ENST00000261889 BLCAPP62952 87 aa9.8□□□□□ -0.84
SNX1-201ENST00000261889 CEMP1Q6PRD7 247 aaPredicted RBP9.8□□□□□ -0.84
SNX1-201ENST00000261889 Q6ZSV7 163 aa9.8□□□□□ -0.84
SNX1-201ENST00000261889 SPINK8P0C7L1 97 aa9.8□□□□□ -0.84
SNX1-201ENST00000261889 XGP55808 180 aa9.8□□□□□ -0.84
SNX1-201ENST00000261889 GPHB5Q86YW7 130 aa9.8□□□□□ -0.84
SNX1-201ENST00000261889 A8MZ25 164 aa9.8□□□□□ -0.84
SNX1-201ENST00000261889 F8W1H4 67 aa9.8□□□□□ -0.84
SNX1-201ENST00000261889 ZFAND2AQ8N6M9 145 aa9.8□□□□□ -0.84
SNX1-201ENST00000261889 NBEAL2Q6ZNJ1 2754 aa9.79□□□□□ -0.84
SNX1-201ENST00000261889 TEX15Q9BXT5 2789 aa9.79□□□□□ -0.84
SNX1-201ENST00000261889 TCL1BO95988 128 aa9.79□□□□□ -0.84
SNX1-201ENST00000261889 TSHBP01222 138 aa9.79□□□□□ -0.84
SNX1-201ENST00000261889 PLNP26678 52 aa9.79□□□□□ -0.84
SNX1-201ENST00000261889 Q8N6K4 173 aa9.79□□□□□ -0.84
SNX1-201ENST00000261889 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
SNX1-201ENST00000261889 ATP6V0BQ99437 205 aa9.79□□□□□ -0.84
SNX1-201ENST00000261889 TRAV2A0A0B4J234 112 aa9.79□□□□□ -0.84
SNX1-201ENST00000261889 CRYGDP07320 174 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 CD7P09564 240 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 ASIPP42127 132 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 IGHV4-39P01824 125 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 ELANEP08246 267 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 FAM110DQ8TAY7 271 aaPredicted RBP9.78□□□□□ -0.84
SNX1-201ENST00000261889 EEF1AKMT3Q96AZ1 226 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 RNF223E7ERA6 249 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 CIDEAO60543 219 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 ZNF688P0C7X2 276 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 P0DMU3 169 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 FAM231AP0DMU4 169 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 FAM231CP0DMU5 169 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 FOXI1Q12951 378 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 OR10J6PQ8NGY7 276 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 Q9UF83 564 aa9.78□□□□□ -0.84
SNX1-201ENST00000261889 A0A0U1RRA0 63 aa9.77□□□□□ -0.84
SNX1-201ENST00000261889 J3QR89 54 aa9.77□□□□□ -0.84
SNX1-201ENST00000261889 AJUBAQ96IF1 538 aa9.77□□□□□ -0.84
SNX1-201ENST00000261889 SLC50A1Q9BRV3 221 aa9.77□□□□□ -0.84
SNX1-201ENST00000261889 KNCNA6PVL3 124 aa9.77□□□□□ -0.85
SNX1-201ENST00000261889 RNASE3P12724 160 aaKnown RBP9.77□□□□□ -0.85
SNX1-201ENST00000261889 Q1RN00 199 aa9.77□□□□□ -0.85
SNX1-201ENST00000261889 ZNRF2Q8NHG8 242 aa9.77□□□□□ -0.85
SNX1-201ENST00000261889 CARD19Q96LW7 228 aa9.77□□□□□ -0.85
SNX1-201ENST00000261889 SCGB2A1O75556 95 aa9.77□□□□□ -0.85
SNX1-201ENST00000261889 MDFICQ9P1T7 246 aa9.77□□□□□ -0.85
SNX1-201ENST00000261889 CDIP1Q9H305 208 aa9.76□□□□□ -0.85
SNX1-201ENST00000261889 GEMIN7Q9H840 131 aaKnown RBP9.76□□□□□ -0.85
SNX1-201ENST00000261889 SMPXQ9UHP9 88 aa9.76□□□□□ -0.85
SNX1-201ENST00000261889 ANKRD17O75179 2603 aaKnown RBP9.76□□□□□ -0.85
SNX1-201ENST00000261889 ZNF56Q15929 161 aa9.76□□□□□ -0.85
SNX1-201ENST00000261889 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
SNX1-201ENST00000261889 DPH3P1Q9H4G8 78 aa9.76□□□□□ -0.85
SNX1-201ENST00000261889 TRAV41A0A0B4J266 112 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 CRYBA4P53673 196 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 C3orf56Q8N813 242 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 MAPK1IP1LQ8NDC0 245 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 CENPVL3A0A0U1RRI6 287 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 IGHV4-38-2P0DP08 117 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 PROK1P58294 105 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 COX8CQ7Z4L0 72 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 ITLN2Q8WWU7 325 aaPredicted RBP9.75□□□□□ -0.85
SNX1-201ENST00000261889 SIRPDQ9H106 197 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 ACANP16112 2415 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 TRBV20-1A0A075B6N2 111 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 C9JAW5 83 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 M0R1W7 72 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 PRSS2P07478 247 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 GNLYP22749 145 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 CFAP126Q5VTH2 177 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 SUMO4Q6EEV6 95 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 DAND5Q8N907 189 aa9.75□□□□□ -0.85
SNX1-201ENST00000261889 DLX4Q92988 240 aaPredicted RBP9.75□□□□□ -0.85
SNX1-201ENST00000261889 PRB1P04280 392 aa9.74□□□□□ -0.85
SNX1-201ENST00000261889 RHPN1-AS1Q9BWJ2 59 aa9.74□□□□□ -0.85
SNX1-201ENST00000261889 IGLV4-69A0A075B6H9 119 aa9.74□□□□□ -0.85
SNX1-201ENST00000261889 SDHAF1A6NFY7 115 aa9.74□□□□□ -0.85
SNX1-201ENST00000261889 CFC1BP0CG36 223 aa9.74□□□□□ -0.85
SNX1-201ENST00000261889 CFC1P0CG37 223 aa9.74□□□□□ -0.85
SNX1-201ENST00000261889 ORMDL2Q53FV1 153 aa9.74□□□□□ -0.85
SNX1-201ENST00000261889 C9orf47Q6ZRZ4 202 aa9.74□□□□□ -0.85
SNX1-201ENST00000261889 ANKRD29Q8N6D5 301 aa9.74□□□□□ -0.85
SNX1-201ENST00000261889 A0A1B0GV72 72 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 SPINK13Q1W4C9 94 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 RNF183Q96D59 192 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 C1QTNF4Q9BXJ3 329 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 TRAV21A0A0B4J279 112 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 A0A0J9YY99 117 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 NPFFO15130 113 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 C5orf56Q8N8D9 126 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 NRGNQ92686 78 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 SPXQ9BT56 116 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 SS18L2Q9UHA2 77 aa9.73□□□□□ -0.85
SNX1-201ENST00000261889 TRAV8-3A0A0A6YYJ7 113 aa9.72□□□□□ -0.85
SNX1-201ENST00000261889 A4D1N5 150 aa9.72□□□□□ -0.85
SNX1-201ENST00000261889 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
SNX1-201ENST00000261889 NDUFA11Q86Y39 141 aa9.72□□□□□ -0.85
SNX1-201ENST00000261889 ZNF48Q96MX3 618 aaPredicted RBP9.72□□□□□ -0.85
SNX1-201ENST00000261889 H3BUX3 64 aa9.72□□□□□ -0.85
SNX1-201ENST00000261889 DUX3Q96PT4 197 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 237.4 ms