RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 MAPKAPK5-AS1Q8N8E1 139 aa8.93□□□□□ -0.98
SOX9-201ENST00000245479 SPATA25Q9BR10 227 aa8.93□□□□□ -0.98
SOX9-201ENST00000245479 IGHV3OR16-12A0A075B7B8 117 aa8.93□□□□□ -0.98
SOX9-201ENST00000245479 MYCNOSP40205 109 aa8.93□□□□□ -0.98
SOX9-201ENST00000245479 TMEM101Q96IK0 257 aa8.93□□□□□ -0.98
SOX9-201ENST00000245479 CFHR4Q92496 578 aa8.93□□□□□ -0.98
SOX9-201ENST00000245479 A0A087WWL8 130 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 LINC00311Q8N616 119 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 RNF5Q99942 180 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 HRNRQ86YZ3 2850 aaPredicted RBP8.92□□□□□ -0.98
SOX9-201ENST00000245479 I3L2K1 104 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 VCYO14598 125 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 BLCAPP62952 87 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 PMVKQ15126 192 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 SPXQ9BT56 116 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 NF1P21359 2839 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 SPANXA1Q9NS26 97 aa8.92□□□□□ -0.98
SOX9-201ENST00000245479 CD28P10747 220 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 EDA2RQ9HAV5 297 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 J3QQQ9 107 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 CFC1BP0CG36 223 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 CFC1P0CG37 223 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 FOXE3Q13461 319 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 ATP6V0E2Q8NHE4 81 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 PLEKHB2Q96CS7 222 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 LGALS1P09382 135 aaKnown RBP8.91□□□□□ -0.98
SOX9-201ENST00000245479 NBL1P41271 181 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 CCL19Q99731 98 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 CELSR2Q9HCU4 2923 aa8.91□□□□□ -0.98
SOX9-201ENST00000245479 INS-IGF2F8WCM5 200 aa8.9□□□□□ -0.98
SOX9-201ENST00000245479 GAS8-AS1O95177 125 aa8.9□□□□□ -0.98
SOX9-201ENST00000245479 TRBV12-3P01733 135 aa8.9□□□□□ -0.98
SOX9-201ENST00000245479 CRIP1P50238 77 aa8.9□□□□□ -0.98
SOX9-201ENST00000245479 DUX3Q96PT4 197 aa8.9□□□□□ -0.98
SOX9-201ENST00000245479 CRYGCP07315 174 aa8.9□□□□□ -0.98
SOX9-201ENST00000245479 MSRB2Q9Y3D2 182 aa8.9□□□□□ -0.98
SOX9-201ENST00000245479 IGSF10Q6WRI0 2623 aa8.9□□□□□ -0.98
SOX9-201ENST00000245479 FBN2P35556 2912 aa8.9□□□□□ -0.99
SOX9-201ENST00000245479 IGHV3-73A0A0B4J1V6 119 aa8.9□□□□□ -0.99
SOX9-201ENST00000245479 IGF1P05019 195 aa8.9□□□□□ -0.99
SOX9-201ENST00000245479 XGP55808 180 aa8.9□□□□□ -0.99
SOX9-201ENST00000245479 SVIPQ8NHG7 77 aa8.9□□□□□ -0.99
SOX9-201ENST00000245479 AGPAT4-IT1Q9H0P7 198 aa8.9□□□□□ -0.99
SOX9-201ENST00000245479 TNFRSF18Q9Y5U5 241 aa8.9□□□□□ -0.99
SOX9-201ENST00000245479 A0A1W2PRX2 142 aa8.89□□□□□ -0.99
SOX9-201ENST00000245479 A4D1N5 150 aa8.89□□□□□ -0.99
SOX9-201ENST00000245479 ZNF80P51504 273 aaPredicted RBP8.89□□□□□ -0.99
SOX9-201ENST00000245479 RPL39LQ96EH5 51 aaKnown RBP8.89□□□□□ -0.99
SOX9-201ENST00000245479 KAAG1Q9UBP8 84 aa8.89□□□□□ -0.99
SOX9-201ENST00000245479 TCL1BO95988 128 aa8.89□□□□□ -0.99
SOX9-201ENST00000245479 IGHV4-38-2P0DP08 117 aa8.89□□□□□ -0.99
SOX9-201ENST00000245479 HOXB4P17483 251 aaPredicted RBP8.89□□□□□ -0.99
SOX9-201ENST00000245479 ZNF876PQ49A33 203 aa8.89□□□□□ -0.99
SOX9-201ENST00000245479 FANCD2OSQ96PS1 177 aa8.89□□□□□ -0.99
SOX9-201ENST00000245479 TEX15Q9BXT5 2789 aa8.88□□□□□ -0.99
SOX9-201ENST00000245479 OVOL3O00110 214 aa8.88□□□□□ -0.99
SOX9-201ENST00000245479 IGHV7-81A0A0B4J1V7 117 aa8.88□□□□□ -0.99
SOX9-201ENST00000245479 ADARB2-AS1A8MUL3 147 aa8.88□□□□□ -0.99
SOX9-201ENST00000245479 CTSGP08311 255 aa8.88□□□□□ -0.99
SOX9-201ENST00000245479 PAX8Q06710 450 aa8.88□□□□□ -0.99
SOX9-201ENST00000245479 TIMM21Q9BVV7 248 aa8.88□□□□□ -0.99
SOX9-201ENST00000245479 IGHV4-61A0A0C4DH41 118 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 TRPT1Q86TN4 253 aaKnown RBP8.87□□□□□ -0.99
SOX9-201ENST00000245479 PIP4P2Q8N4L2 257 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 YAE1D1Q9NRH1 226 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 TRAV12-2A0A075B6T6 113 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 TRBV6-1A0A0K0K1D8 114 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 SDHAF1A6NFY7 115 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 OVOL1O14753 267 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 IGLV2-11P01706 119 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 RNASE1P07998 156 aaKnown RBP8.87□□□□□ -0.99
SOX9-201ENST00000245479 C9orf139Q6ZV77 190 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 NPFFO15130 113 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 DUSP14O95147 198 aaKnown RBP8.87□□□□□ -0.99
SOX9-201ENST00000245479 CARD19Q96LW7 228 aa8.87□□□□□ -0.99
SOX9-201ENST00000245479 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
SOX9-201ENST00000245479 C19orf54Q5BKX5 351 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 UCNP55089 124 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 C10orf99Q6UWK7 81 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 COPS9Q8WXC6 57 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 A0A096LNJ9 63 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 TRBV7-9A0A0J9YWB2 115 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 LINC01620Q4KN68 170 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 Q6ZS46 218 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 OR13C6PQ8NH95 151 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 TRAV41A0A0B4J266 112 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 NDUFA11Q86Y39 141 aa8.86□□□□□ -0.99
SOX9-201ENST00000245479 FLNAP21333 2647 aaKnown RBP8.85□□□□□ -0.99
SOX9-201ENST00000245479 IGKV3OR2-268A0A0C4DH90 116 aa8.85□□□□□ -0.99
SOX9-201ENST00000245479 CFAP126Q5VTH2 177 aa8.85□□□□□ -0.99
SOX9-201ENST00000245479 NBEAL2Q6ZNJ1 2754 aa8.85□□□□□ -0.99
SOX9-201ENST00000245479 TRAV12-1A0A0B4J245 112 aa8.85□□□□□ -0.99
SOX9-201ENST00000245479 UNQ9165/PRO28630Q6UXU0 137 aa8.85□□□□□ -0.99
SOX9-201ENST00000245479 BAALCQ8WXS3 180 aa8.85□□□□□ -0.99
SOX9-201ENST00000245479 ZNF625Q96I27 306 aaPredicted RBP8.85□□□□□ -0.99
SOX9-201ENST00000245479 HHLA3Q9XRX5 114 aa8.85□□□□□ -0.99
SOX9-201ENST00000245479 C11orf86A6NJI1 115 aa8.84□□□□□ -0.99
SOX9-201ENST00000245479 EDN2P20800 178 aa8.84□□□□□ -0.99
SOX9-201ENST00000245479 GAGE2AQ6NT46 116 aa8.84□□□□□ -0.99
SOX9-201ENST00000245479 TMEM141Q96I45 108 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms