RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 PDZD11Q5EBL8 140 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 FA2HQ7L5A8 372 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 NIT1Q86X76 327 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 GOLT1BQ9Y3E0 138 aa9.64□□□□□ -0.87
SLIRP-201ENST00000238688 HUWE1Q7Z6Z7 4374 aaKnown RBP9.63□□□□□ -0.87
SLIRP-201ENST00000238688 EVI2AP22794 236 aa9.63□□□□□ -0.87
SLIRP-201ENST00000238688 IQCJQ1A5X6 159 aa9.63□□□□□ -0.87
SLIRP-201ENST00000238688 RNASEKQ6P5S7 137 aaKnown RBP9.63□□□□□ -0.87
SLIRP-201ENST00000238688 Q6ZQT7 251 aa9.63□□□□□ -0.87
SLIRP-201ENST00000238688 PRSS3P2Q8NHM4 247 aa9.63□□□□□ -0.87
SLIRP-201ENST00000238688 RCHY1Q96PM5 261 aa9.63□□□□□ -0.87
SLIRP-201ENST00000238688 EDA2RQ9HAV5 297 aa9.63□□□□□ -0.87
SLIRP-201ENST00000238688 TENM3Q9P273 2699 aa9.63□□□□□ -0.87
SLIRP-201ENST00000238688 STAB2Q8WWQ8 2551 aa9.62□□□□□ -0.87
SLIRP-201ENST00000238688 A8MWV9 139 aa9.62□□□□□ -0.87
SLIRP-201ENST00000238688 M0R2P5 195 aa9.62□□□□□ -0.87
SLIRP-201ENST00000238688 G0S2P27469 103 aa9.62□□□□□ -0.87
SLIRP-201ENST00000238688 C12orf57Q99622 126 aa9.62□□□□□ -0.87
SLIRP-201ENST00000238688 NBEAL2Q6ZNJ1 2754 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 KIR2DL5BA0A0G2JN68 375 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 KIR2DL5BA0A0G2JPC4 375 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 H7C1H1 209 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 RHODO00212 210 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 TCAPO15273 167 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 CIDEAO60543 219 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 TNFRSF6BO95407 300 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 KIR2DL5AQ8N109 375 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 KIR2DL5BQ8NHK3 375 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 LINC01587Q99440 93 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 HSPB8Q9UJY1 196 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 KIF25-AS1Q9Y6Z4 181 aa9.61□□□□□ -0.87
SLIRP-201ENST00000238688 MUC21A0A0G2JKD1 596 aa9.6□□□□□ -0.87
SLIRP-201ENST00000238688 MUC21A0A140T8X8 626 aa9.6□□□□□ -0.87
SLIRP-201ENST00000238688 NUPR1O60356 82 aa9.6□□□□□ -0.87
SLIRP-201ENST00000238688 LGALS9BQ3B8N2 356 aa9.6□□□□□ -0.87
SLIRP-201ENST00000238688 Q8N8P6 123 aa9.6□□□□□ -0.87
SLIRP-201ENST00000238688 TMEM263Q8WUH6 116 aaKnown RBP9.6□□□□□ -0.87
SLIRP-201ENST00000238688 TMEM208Q9BTX3 173 aa9.6□□□□□ -0.87
SLIRP-201ENST00000238688 NPYP01303 97 aa9.59□□□□□ -0.87
SLIRP-201ENST00000238688 ZNF876PQ49A33 203 aa9.59□□□□□ -0.87
SLIRP-201ENST00000238688 PYY3Q5JQD4 70 aa9.59□□□□□ -0.87
SLIRP-201ENST00000238688 NRACQ8N912 160 aa9.59□□□□□ -0.87
SLIRP-201ENST00000238688 C16orf74Q96GX8 76 aa9.59□□□□□ -0.87
SLIRP-201ENST00000238688 MDFICQ9P1T7 246 aa9.59□□□□□ -0.87
SLIRP-201ENST00000238688 TIMM8BQ9Y5J9 83 aaPredicted RBP9.59□□□□□ -0.87
SLIRP-201ENST00000238688 TRBV6-5A0A0K0K1A5 114 aa9.58□□□□□ -0.88
SLIRP-201ENST00000238688 RBMY1A1P0DJD3 496 aaKnown RBP9.58□□□□□ -0.88
SLIRP-201ENST00000238688 RBMY1CP0DJD4 496 aa9.58□□□□□ -0.88
SLIRP-201ENST00000238688 S100A12P80511 92 aa9.58□□□□□ -0.88
SLIRP-201ENST00000238688 RBMY1FQ15415 496 aaKnown RBP9.58□□□□□ -0.88
SLIRP-201ENST00000238688 ZNF124Q15973 351 aa9.58□□□□□ -0.88
SLIRP-201ENST00000238688 C14orf178Q8N769 122 aaPredicted RBP9.58□□□□□ -0.88
SLIRP-201ENST00000238688 C11orf72Q8NBR9 251 aa9.58□□□□□ -0.88
SLIRP-201ENST00000238688 RASL10AQ92737 203 aa9.58□□□□□ -0.88
SLIRP-201ENST00000238688 URB1-AS1Q96HZ7 61 aa9.58□□□□□ -0.88
SLIRP-201ENST00000238688 XCL2Q9UBD3 114 aa9.58□□□□□ -0.88
SLIRP-201ENST00000238688 IGHV1-24A0A0C4DH33 117 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 SMIM9A6NGZ8 99 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 LEPROTL1O95214 131 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 HBDP02042 147 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 IFI27P40305 119 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-201ENST00000238688 LINC00315P59091 139 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 SSTP61278 116 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 SUMO2P61956 95 aaKnown RBP9.57□□□□□ -0.88
SLIRP-201ENST00000238688 DAZ2Q13117 558 aaKnown RBP9.57□□□□□ -0.88
SLIRP-201ENST00000238688 ZFP2Q6ZN57 461 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-201ENST00000238688 IL17DQ8TAD2 202 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 SMIM2Q9BVW6 85 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 CSTL1Q9H114 145 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 DNAH7Q8WXX0 4024 aa9.57□□□□□ -0.88
SLIRP-201ENST00000238688 RYR3Q15413 4870 aa9.56□□□□□ -0.88
SLIRP-201ENST00000238688 C20orf202A1L168 122 aa9.56□□□□□ -0.88
SLIRP-201ENST00000238688 BTF3P20290 206 aaKnown RBP9.56□□□□□ -0.88
SLIRP-201ENST00000238688 APOC4P55056 127 aa9.56□□□□□ -0.88
SLIRP-201ENST00000238688 FXYD7P58549 80 aa9.56□□□□□ -0.88
SLIRP-201ENST00000238688 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
SLIRP-201ENST00000238688 Q6ZWC4 215 aa9.56□□□□□ -0.88
SLIRP-201ENST00000238688 SPATA12Q7Z6I5 190 aa9.56□□□□□ -0.88
SLIRP-201ENST00000238688 C1orf158Q8N1D5 194 aa9.56□□□□□ -0.88
SLIRP-201ENST00000238688 RNASE8Q8TDE3 154 aaKnown RBP9.56□□□□□ -0.88
SLIRP-201ENST00000238688 NCR2O95944 276 aa9.55□□□□□ -0.88
SLIRP-201ENST00000238688 CRYGDP07320 174 aa9.55□□□□□ -0.88
SLIRP-201ENST00000238688 FCER1GP30273 86 aa9.55□□□□□ -0.88
SLIRP-201ENST00000238688 PMCHL1Q16048 86 aa9.55□□□□□ -0.88
SLIRP-201ENST00000238688 CSNK1G2-AS1Q8NCQ2 148 aa9.55□□□□□ -0.88
SLIRP-201ENST00000238688 WWC2-AS2Q96NR7 200 aa9.55□□□□□ -0.88
SLIRP-201ENST00000238688 TMEM70Q9BUB7 260 aa9.55□□□□□ -0.88
SLIRP-201ENST00000238688 NIT2Q9NQR4 276 aa9.55□□□□□ -0.88
SLIRP-201ENST00000238688 IGLV2-18A0A075B6J9 118 aa9.54□□□□□ -0.88
SLIRP-201ENST00000238688 MGPP08493 103 aa9.54□□□□□ -0.88
SLIRP-201ENST00000238688 GIG44P09565 113 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-201ENST00000238688 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-201ENST00000238688 LAGE3Q14657 143 aa9.54□□□□□ -0.88
SLIRP-201ENST00000238688 PET117Q6UWS5 81 aa9.54□□□□□ -0.88
SLIRP-201ENST00000238688 MAP1LC3CQ9BXW4 147 aa9.54□□□□□ -0.88
SLIRP-201ENST00000238688 ST20Q9HBF5 79 aa9.54□□□□□ -0.88
SLIRP-201ENST00000238688 SMKR1H3BMG3 65 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms