RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 IGHV4OR15-8A0A075B7B6 117 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 A0A087WW49 117 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 H7C1H1 209 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 RIPPLY3P57055 190 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 LINC00315P59091 139 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 CFHR3Q02985 330 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 SUMO4Q6EEV6 95 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 AMTNQ6UX39 209 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 FAM19A4Q96LR4 140 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 FLNAP21333 2647 aaKnown RBP6.82□□□□□ -1.32
SYDE2-201ENST00000234668 A0A1W2PPM0 123 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 F8VRH5 84 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 NDUFS8O00217 210 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 SIVA1O15304 175 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 C11orf44Q8N8P7 122 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 TP53TG1Q9Y2A0 90 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 ITPR3Q14573 2671 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 KNCNA6PVL3 124 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 KHDC1LQ5JSQ8 128 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 Q8N1Y9 231 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 TOMM6Q96B49 74 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 BBC3Q96PG8 261 aaPredicted RBP6.81□□□□□ -1.32
SYDE2-201ENST00000234668 SLC25A16P16260 332 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 ID1P41134 155 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 ZNF56Q15929 161 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 ORMDL2Q53FV1 153 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 UFSP1Q6NVU6 142 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 CEND1Q8N111 149 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 NEXN-AS1Q8NBZ9 246 aa6.81□□□□□ -1.32
SYDE2-201ENST00000234668 KLLNB2CW77 178 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 HOXA3O43365 443 aaPredicted RBP6.8□□□□□ -1.32
SYDE2-201ENST00000234668 TSHBP01222 138 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 P0DMU3 169 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 FAM231AP0DMU4 169 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 FAM231CP0DMU5 169 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 SLURP1P55000 103 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 PROK1P58294 105 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 SCGB2A2Q13296 93 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 GTF2H5Q6ZYL4 71 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 PLEKHB2Q96CS7 222 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 Q9UF83 564 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 KIF25-AS1Q9Y6Z4 181 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 IGHV3-64A0A075B6Q5 118 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 SDHAF1A6NFY7 115 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 OR11H12B2RN74 326 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 K7EP34 96 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 CRYGDP07320 174 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 FABP2P12104 132 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 RPL24P83731 157 aaKnown RBP6.8□□□□□ -1.32
SYDE2-201ENST00000234668 OXLD1Q5BKU9 147 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 OR11H1Q8NG94 326 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 OR11H2Q8NH07 326 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 PRADC1Q9BSG0 188 aa6.8□□□□□ -1.32
SYDE2-201ENST00000234668 PRSS47A8MTI9 375 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 H3BUA1 57 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 HLA-DRB4P13762 266 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 LINC01356Q8N9X3 169 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 HLA-DRB4X5D2U9 266 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 C11orf86A6NJI1 115 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 HOXD3P31249 432 aaPredicted RBP6.79□□□□□ -1.32
SYDE2-201ENST00000234668 CDKN1BP46527 198 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 C20orf78Q9BR46 151 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 PLNP26678 52 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 ZFP2Q6ZN57 461 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 ATP6V0BQ99437 205 aa6.79□□□□□ -1.32
SYDE2-201ENST00000234668 A0A0J9YX75 114 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 ZNF815PA8K554 130 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 ZNF876PQ49A33 203 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
SYDE2-201ENST00000234668 ITPR2Q14571 2701 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 IGHV3-16A0A0C4DH30 117 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 H3BMG7 143 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 SNRPD3P62318 126 aaKnown RBP6.78□□□□□ -1.32
SYDE2-201ENST00000234668 C12orf74Q32Q52 190 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 RNASE13Q5GAN3 156 aaKnown RBP6.78□□□□□ -1.32
SYDE2-201ENST00000234668 TCTEX1D4Q5JR98 221 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 HIST2H2BCQ6DN03 193 aa6.78□□□□□ -1.32
SYDE2-201ENST00000234668 FN1P02751 2386 aaKnown RBP6.77□□□□□ -1.32
SYDE2-201ENST00000234668 LGALS1P09382 135 aaKnown RBP6.77□□□□□ -1.33
SYDE2-201ENST00000234668 RBMY1A1P0DJD3 496 aaKnown RBP6.77□□□□□ -1.33
SYDE2-201ENST00000234668 RBMY1CP0DJD4 496 aa6.77□□□□□ -1.33
SYDE2-201ENST00000234668 DEFB131AP59861 70 aa6.77□□□□□ -1.33
SYDE2-201ENST00000234668 RBMY1FQ15415 496 aaKnown RBP6.77□□□□□ -1.33
SYDE2-201ENST00000234668 MORN3Q6PF18 240 aaPredicted RBP6.77□□□□□ -1.33
SYDE2-201ENST00000234668 HIGD1BQ9P298 99 aa6.77□□□□□ -1.33
SYDE2-201ENST00000234668 UBR5O95071 2799 aaPredicted RBP6.77□□□□□ -1.33
SYDE2-201ENST00000234668 K7EMT4 169 aa6.77□□□□□ -1.33
SYDE2-201ENST00000234668 K7EQG2 157 aa6.77□□□□□ -1.33
SYDE2-201ENST00000234668 POLR2KP53803 58 aaKnown RBP6.77□□□□□ -1.33
SYDE2-201ENST00000234668 APRG1Q8IVJ8 170 aa6.77□□□□□ -1.33
SYDE2-201ENST00000234668 IGLL5B9A064 214 aa6.76□□□□□ -1.33
SYDE2-201ENST00000234668 APOMO95445 188 aa6.76□□□□□ -1.33
SYDE2-201ENST00000234668 SRSF9Q13242 221 aaKnown RBP eCLIP6.76□□□□□ -1.33
SYDE2-201ENST00000234668 WFDC2Q14508 124 aa6.76□□□□□ -1.33
SYDE2-201ENST00000234668 CEMP1Q6PRD7 247 aaPredicted RBP6.76□□□□□ -1.33
SYDE2-201ENST00000234668 KIR2DL4Q99706 377 aa6.76□□□□□ -1.33
SYDE2-201ENST00000234668 TRAV12-1A0A0B4J245 112 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms