RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 IGHV1-24A0A0C4DH33 117 aa12.79□□□□□ -0.36
PHGDH-208ENST00000641023 A8MTW9 85 aa12.79□□□□□ -0.36
PHGDH-208ENST00000641023 SMKR1H3BMG3 65 aa12.79□□□□□ -0.36
PHGDH-208ENST00000641023 SETXQ7Z333 2677 aaKnown RBP12.79□□□□□ -0.36
PHGDH-208ENST00000641023 NSD1Q96L73 2696 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-208ENST00000641023 WNK1Q9H4A3 2382 aa12.79□□□□□ -0.36
PHGDH-208ENST00000641023 AGRNO00468 2067 aa12.79□□□□□ -0.36
PHGDH-208ENST00000641023 LOC389332A0A1B0GUA5 103 aa12.79□□□□□ -0.36
PHGDH-208ENST00000641023 SAP30O75446 220 aa12.79□□□□□ -0.36
PHGDH-208ENST00000641023 NCR2O95944 276 aa12.79□□□□□ -0.36
PHGDH-208ENST00000641023 IFI27P40305 119 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-208ENST00000641023 HIVEP1P15822 2718 aa12.78□□□□□ -0.36
PHGDH-208ENST00000641023 IGHV1OR15-1A0A075B7D0 117 aa12.78□□□□□ -0.36
PHGDH-208ENST00000641023 NPYP01303 97 aa12.78□□□□□ -0.36
PHGDH-208ENST00000641023 ZNF124Q15973 351 aa12.78□□□□□ -0.36
PHGDH-208ENST00000641023 PMCHL1Q16048 86 aa12.78□□□□□ -0.36
PHGDH-208ENST00000641023 LEPROTL1O95214 131 aa12.77□□□□□ -0.37
PHGDH-208ENST00000641023 C3orf79P0CE67 100 aa12.77□□□□□ -0.37
PHGDH-208ENST00000641023 TNFRSF6BO95407 300 aa12.76□□□□□ -0.37
PHGDH-208ENST00000641023 KRTAP10-3P60369 221 aa12.76□□□□□ -0.37
PHGDH-208ENST00000641023 AP1S3Q96PC3 154 aa12.76□□□□□ -0.37
PHGDH-208ENST00000641023 MAP1LC3AQ9H492 121 aa12.76□□□□□ -0.37
PHGDH-208ENST00000641023 DPH3P1Q9H4G8 78 aa12.76□□□□□ -0.37
PHGDH-208ENST00000641023 SPRY2O43597 315 aa12.76□□□□□ -0.37
PHGDH-208ENST00000641023 FXYD7P58549 80 aa12.76□□□□□ -0.37
PHGDH-208ENST00000641023 ODF3L2Q3SX64 289 aa12.76□□□□□ -0.37
PHGDH-208ENST00000641023 Q8N1Y9 231 aa12.76□□□□□ -0.37
PHGDH-208ENST00000641023 FN1P02751 2386 aaKnown RBP12.76□□□□□ -0.37
PHGDH-208ENST00000641023 IGHV3-16A0A0C4DH30 117 aa12.75□□□□□ -0.37
PHGDH-208ENST00000641023 OR11H12B2RN74 326 aa12.75□□□□□ -0.37
PHGDH-208ENST00000641023 CRXO43186 299 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-208ENST00000641023 NXPH4O95158 308 aa12.75□□□□□ -0.37
PHGDH-208ENST00000641023 CMC4P56277 68 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-208ENST00000641023 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
PHGDH-208ENST00000641023 BTF3P20290 206 aaKnown RBP12.74□□□□□ -0.37
PHGDH-208ENST00000641023 C14orf178Q8N769 122 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-208ENST00000641023 TRGV11A0A075B6L2 103 aa12.74□□□□□ -0.37
PHGDH-208ENST00000641023 RBMY1BA6NDE4 496 aaKnown RBP12.74□□□□□ -0.37
PHGDH-208ENST00000641023 RBMY1EA6NEQ0 496 aaKnown RBP12.74□□□□□ -0.37
PHGDH-208ENST00000641023 TSTD3H0UI37 97 aa12.74□□□□□ -0.37
PHGDH-208ENST00000641023 GAS8-AS1O95177 125 aa12.74□□□□□ -0.37
PHGDH-208ENST00000641023 IGLV1-51P01701 117 aa12.74□□□□□ -0.37
PHGDH-208ENST00000641023 PF4P02776 101 aa12.74□□□□□ -0.37
PHGDH-208ENST00000641023 RBMY1DP0C7P1 496 aaKnown RBP12.74□□□□□ -0.37
PHGDH-208ENST00000641023 PKIAP61925 76 aa12.74□□□□□ -0.37
PHGDH-208ENST00000641023 OR2K2Q8NGT1 345 aa12.74□□□□□ -0.37
PHGDH-208ENST00000641023 CLUHP3Q96NS8 147 aa12.74□□□□□ -0.37
PHGDH-208ENST00000641023 CTAG1AP78358 180 aa12.73□□□□□ -0.37
PHGDH-208ENST00000641023 STHQ8IWL8 128 aa12.73□□□□□ -0.37
PHGDH-208ENST00000641023 C9orf85Q96MD7 179 aa12.73□□□□□ -0.37
PHGDH-208ENST00000641023 MDFICQ9P1T7 246 aa12.73□□□□□ -0.37
PHGDH-208ENST00000641023 HSPB8Q9UJY1 196 aa12.73□□□□□ -0.37
PHGDH-208ENST00000641023 SMIM17P0DL12 118 aa12.73□□□□□ -0.37
PHGDH-208ENST00000641023 ZNF664Q8N3J9 261 aa12.73□□□□□ -0.37
PHGDH-208ENST00000641023 TMEM70Q9BUB7 260 aa12.73□□□□□ -0.37
PHGDH-208ENST00000641023 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
PHGDH-208ENST00000641023 FLNBO75369 2602 aaKnown RBP12.72□□□□□ -0.37
PHGDH-208ENST00000641023 TRAV26-2A0A0B4J265 109 aa12.72□□□□□ -0.37
PHGDH-208ENST00000641023 CBY3A6NI87 242 aa12.72□□□□□ -0.37
PHGDH-208ENST00000641023 GATA1P15976 413 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-208ENST00000641023 SYT8Q8NBV8 401 aa12.72□□□□□ -0.37
PHGDH-208ENST00000641023 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
PHGDH-208ENST00000641023 RBMY1A1P0DJD3 496 aaKnown RBP12.71□□□□□ -0.37
PHGDH-208ENST00000641023 RBMY1CP0DJD4 496 aa12.71□□□□□ -0.37
PHGDH-208ENST00000641023 RBMY1FQ15415 496 aaKnown RBP12.71□□□□□ -0.37
PHGDH-208ENST00000641023 TEX43Q6ZNM6 134 aa12.71□□□□□ -0.37
PHGDH-208ENST00000641023 NRACQ8N912 160 aa12.71□□□□□ -0.38
PHGDH-208ENST00000641023 Q8N976 141 aa12.71□□□□□ -0.38
PHGDH-208ENST00000641023 C20orf144Q9BQM9 153 aa12.71□□□□□ -0.38
PHGDH-208ENST00000641023 PRSS47A8MTI9 375 aa12.7□□□□□ -0.38
PHGDH-208ENST00000641023 DEFB125Q8N687 156 aa12.7□□□□□ -0.38
PHGDH-208ENST00000641023 MAP1LC3CQ9BXW4 147 aa12.7□□□□□ -0.38
PHGDH-208ENST00000641023 MGPP08493 103 aa12.69□□□□□ -0.38
PHGDH-208ENST00000641023 HTN1P15515 57 aa12.69□□□□□ -0.38
PHGDH-208ENST00000641023 NUTF2P61970 127 aaKnown RBP12.69□□□□□ -0.38
PHGDH-208ENST00000641023 FAM110AQ9BQ89 295 aa12.69□□□□□ -0.38
PHGDH-208ENST00000641023 MUC4Q99102 2169 aa12.69□□□□□ -0.38
PHGDH-208ENST00000641023 LINC01546A6NGU7 62 aa12.69□□□□□ -0.38
PHGDH-208ENST00000641023 INSP01308 110 aa12.69□□□□□ -0.38
PHGDH-208ENST00000641023 Q8N8P6 123 aa12.69□□□□□ -0.38
PHGDH-208ENST00000641023 PRO1933Q9H354 126 aa12.69□□□□□ -0.38
PHGDH-208ENST00000641023 PPP1R17O96001 155 aa12.68□□□□□ -0.38
PHGDH-208ENST00000641023 HBDP02042 147 aa12.68□□□□□ -0.38
PHGDH-208ENST00000641023 KIF25-AS1Q9Y6Z4 181 aa12.68□□□□□ -0.38
PHGDH-208ENST00000641023 SYS1-DBNDD2H3BUS1 97 aa12.68□□□□□ -0.38
PHGDH-208ENST00000641023 LINC00173Q6ZV60 143 aa12.68□□□□□ -0.38
PHGDH-208ENST00000641023 TRPT1Q86TN4 253 aaKnown RBP12.68□□□□□ -0.38
PHGDH-208ENST00000641023 POM121L12Q8N7R1 296 aa12.68□□□□□ -0.38
PHGDH-208ENST00000641023 LINC00482Q8N8I6 264 aa12.68□□□□□ -0.38
PHGDH-208ENST00000641023 VAMP8Q9BV40 100 aa12.68□□□□□ -0.38
PHGDH-208ENST00000641023 A0A096LNJ9 63 aa12.67□□□□□ -0.38
PHGDH-208ENST00000641023 LINC01587Q99440 93 aa12.67□□□□□ -0.38
PHGDH-208ENST00000641023 ZNF747Q9BV97 191 aa12.67□□□□□ -0.38
PHGDH-208ENST00000641023 BEAN1Q3B7T3 259 aa12.66□□□□□ -0.38
PHGDH-208ENST00000641023 ZNF876PQ49A33 203 aa12.66□□□□□ -0.38
PHGDH-208ENST00000641023 C20orf78Q9BR46 151 aa12.66□□□□□ -0.38
PHGDH-208ENST00000641023 LINC00467Q9BRT7 94 aa12.66□□□□□ -0.38
PHGDH-208ENST00000641023 JPT2Q9H910 190 aa12.66□□□□□ -0.38
PHGDH-208ENST00000641023 IGLV2-18A0A075B6J9 118 aa12.66□□□□□ -0.38
PHGDH-208ENST00000641023 C20orf202A1L168 122 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms