RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ASIPP42127 132 aa18.51■□□□□ 0.55
VEGFA-231ENST00000640499 CENPWQ5EE01 88 aa18.51■□□□□ 0.55
VEGFA-231ENST00000640499 ZNF506Q5JVG8 444 aa18.51■□□□□ 0.55
VEGFA-231ENST00000640499 MED9Q9NWA0 146 aa18.51■□□□□ 0.55
VEGFA-231ENST00000640499 IL36BQ9NZH7 164 aa18.51■□□□□ 0.55
VEGFA-231ENST00000640499 PRO0255Q9UI72 69 aa18.51■□□□□ 0.55
VEGFA-231ENST00000640499 TMSB15BA0A087X1C1 80 aa18.5■□□□□ 0.55
VEGFA-231ENST00000640499 RS1O15537 224 aa18.5■□□□□ 0.55
VEGFA-231ENST00000640499 OR4C5Q8NGB2 326 aa18.5■□□□□ 0.55
VEGFA-231ENST00000640499 LINC00588Q9Y4M8 146 aa18.5■□□□□ 0.55
VEGFA-231ENST00000640499 H3BVH4 76 aa18.49■□□□□ 0.55
VEGFA-231ENST00000640499 PAX4O43316 350 aa18.49■□□□□ 0.55
VEGFA-231ENST00000640499 ARMS2P0C7Q2 107 aa18.49■□□□□ 0.55
VEGFA-231ENST00000640499 TAGLN2P37802 199 aaKnown RBP18.49■□□□□ 0.55
VEGFA-231ENST00000640499 RPL19P84098 196 aaKnown RBP18.49■□□□□ 0.55
VEGFA-231ENST00000640499 CFAP126Q5VTH2 177 aa18.49■□□□□ 0.55
VEGFA-231ENST00000640499 UBE2DNLQ8IWF7 75 aa18.49■□□□□ 0.55
VEGFA-231ENST00000640499 SCRT2Q9NQ03 307 aa18.49■□□□□ 0.55
VEGFA-231ENST00000640499 TRGV4A0A0C4DH28 118 aa18.48■□□□□ 0.55
VEGFA-231ENST00000640499 RBFOX3A6NFN3 312 aa18.48■□□□□ 0.55
VEGFA-231ENST00000640499 S100A4P26447 101 aaKnown RBP18.48■□□□□ 0.55
VEGFA-231ENST00000640499 ESRGQ1W209 222 aa18.48■□□□□ 0.55
VEGFA-231ENST00000640499 SLAQ13239 276 aa18.46■□□□□ 0.55
VEGFA-231ENST00000640499 DMRTA1Q5VZB9 504 aa18.46■□□□□ 0.55
VEGFA-231ENST00000640499 PRR27Q6MZM9 219 aa18.46■□□□□ 0.55
VEGFA-231ENST00000640499 TEX261Q6UWH6 196 aa18.46■□□□□ 0.55
VEGFA-231ENST00000640499 FRAS1Q86XX4 4008 aa18.45■□□□□ 0.54
VEGFA-231ENST00000640499 ZNRF2Q8NHG8 242 aa18.45■□□□□ 0.54
VEGFA-231ENST00000640499 PCNPQ8WW12 178 aaKnown RBP18.45■□□□□ 0.54
VEGFA-231ENST00000640499 JPT2Q9H910 190 aa18.45■□□□□ 0.54
VEGFA-231ENST00000640499 DNAH17Q9UFH2 4485 aa18.45■□□□□ 0.54
VEGFA-231ENST00000640499 GATA1P15976 413 aaPredicted RBP18.44■□□□□ 0.54
VEGFA-231ENST00000640499 GNG4P50150 75 aa18.44■□□□□ 0.54
VEGFA-231ENST00000640499 IGLV2-18A0A075B6J9 118 aa18.43■□□□□ 0.54
VEGFA-231ENST00000640499 C19orf71A6NCJ1 209 aa18.43■□□□□ 0.54
VEGFA-231ENST00000640499 CCL18P55774 89 aa18.43■□□□□ 0.54
VEGFA-231ENST00000640499 PIK3CD-AS1Q5SR53 167 aa18.43■□□□□ 0.54
VEGFA-231ENST00000640499 IGHV3-73A0A0B4J1V6 119 aa18.42■□□□□ 0.54
VEGFA-231ENST00000640499 LOC100131303A0A0U1RQF7 123 aa18.42■□□□□ 0.54
VEGFA-231ENST00000640499 FAM3BP58499 235 aaPredicted RBP18.42■□□□□ 0.54
VEGFA-231ENST00000640499 UFSP1Q6NVU6 142 aa18.42■□□□□ 0.54
VEGFA-231ENST00000640499 SMIM12Q96EX1 92 aa18.42■□□□□ 0.54
VEGFA-231ENST00000640499 SAMD10Q9BYL1 202 aa18.42■□□□□ 0.54
VEGFA-231ENST00000640499 M0R2N4 97 aa18.41■□□□□ 0.54
VEGFA-231ENST00000640499 CXCL1P09341 107 aa18.41■□□□□ 0.54
VEGFA-231ENST00000640499 MGST1P10620 155 aaKnown RBP18.41■□□□□ 0.54
VEGFA-231ENST00000640499 Q6ZR54 194 aa18.41■□□□□ 0.54
VEGFA-231ENST00000640499 Q6ZSN1 163 aa18.41■□□□□ 0.54
VEGFA-231ENST00000640499 PARLQ9H300 379 aa18.41■□□□□ 0.54
VEGFA-231ENST00000640499 ICOSQ9Y6W8 199 aa18.41■□□□□ 0.54
VEGFA-231ENST00000640499 K7EQD1 137 aa18.4■□□□□ 0.54
VEGFA-231ENST00000640499 TOR2AQ5JU69 321 aa18.4■□□□□ 0.54
VEGFA-231ENST00000640499 FAM210AQ96ND0 272 aa18.4■□□□□ 0.54
VEGFA-231ENST00000640499 FAT2Q9NYQ8 4349 aa18.39■□□□□ 0.53
VEGFA-231ENST00000640499 TMEM250H0YL14 139 aa18.39■□□□□ 0.53
VEGFA-231ENST00000640499 GYPEP15421 78 aa18.39■□□□□ 0.53
VEGFA-231ENST00000640499 SLC25A29Q8N8R3 303 aa18.39■□□□□ 0.53
VEGFA-231ENST00000640499 SSBP4Q9BWG4 385 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-231ENST00000640499 K7EN84 100 aa18.38■□□□□ 0.53
VEGFA-231ENST00000640499 MED14OSP0DP75 135 aa18.38■□□□□ 0.53
VEGFA-231ENST00000640499 MRPL23Q16540 153 aaKnown RBP18.38■□□□□ 0.53
VEGFA-231ENST00000640499 OCC1Q8TAD7 63 aa18.38■□□□□ 0.53
VEGFA-231ENST00000640499 A8MWV9 139 aa18.37■□□□□ 0.53
VEGFA-231ENST00000640499 CIDEAO60543 219 aa18.37■□□□□ 0.53
VEGFA-231ENST00000640499 LYPD5Q6UWN5 251 aa18.37■□□□□ 0.53
VEGFA-231ENST00000640499 PHLDA3Q9Y5J5 127 aa18.37■□□□□ 0.53
VEGFA-231ENST00000640499 M0R381 172 aa18.36■□□□□ 0.53
VEGFA-231ENST00000640499 SNAI2O43623 268 aa18.36■□□□□ 0.53
VEGFA-231ENST00000640499 NXPH4O95158 308 aa18.36■□□□□ 0.53
VEGFA-231ENST00000640499 GZMBP10144 247 aa18.36■□□□□ 0.53
VEGFA-231ENST00000640499 OR10AG1Q8NH19 301 aa18.36■□□□□ 0.53
VEGFA-231ENST00000640499 UPK3BQ9BT76 320 aa18.36■□□□□ 0.53
VEGFA-231ENST00000640499 MRPS16Q9Y3D3 137 aaKnown RBP18.36■□□□□ 0.53
VEGFA-231ENST00000640499 ZFP2Q6ZN57 461 aa18.35■□□□□ 0.53
VEGFA-231ENST00000640499 SYT8Q8NBV8 401 aa18.35■□□□□ 0.53
VEGFA-231ENST00000640499 SFRP2Q96HF1 295 aa18.35■□□□□ 0.53
VEGFA-231ENST00000640499 EIF5A2Q9GZV4 153 aaKnown RBP18.35■□□□□ 0.53
VEGFA-231ENST00000640499 Q9UF83 564 aa18.35■□□□□ 0.53
VEGFA-231ENST00000640499 TRBV6-4A0A1B0GX49 114 aa18.34■□□□□ 0.53
VEGFA-231ENST00000640499 NDUFS6O75380 124 aaKnown RBP18.34■□□□□ 0.53
VEGFA-231ENST00000640499 CRYGDP07320 174 aa18.34■□□□□ 0.53
VEGFA-231ENST00000640499 SRP19P09132 144 aaKnown RBP18.34■□□□□ 0.53
VEGFA-231ENST00000640499 Q9H8V8 135 aa18.34■□□□□ 0.53
VEGFA-231ENST00000640499 MUC21A0A0G2JKD1 596 aa18.33■□□□□ 0.52
VEGFA-231ENST00000640499 MUC21A0A140T8X8 626 aa18.33■□□□□ 0.52
VEGFA-231ENST00000640499 OR5AL1P0C617 328 aa18.33■□□□□ 0.52
VEGFA-231ENST00000640499 NEGR1Q7Z3B1 354 aa18.33■□□□□ 0.52
VEGFA-231ENST00000640499 ZFP82Q8N141 532 aa18.33■□□□□ 0.52
VEGFA-231ENST00000640499 NUDT10Q8NFP7 164 aa18.33■□□□□ 0.52
VEGFA-231ENST00000640499 OR2D3Q8NGH3 330 aa18.33■□□□□ 0.52
VEGFA-231ENST00000640499 NUDT11Q96G61 164 aa18.33■□□□□ 0.52
VEGFA-231ENST00000640499 C9JQL5 133 aa18.32■□□□□ 0.52
VEGFA-231ENST00000640499 IGLC6P0CF74 106 aa18.32■□□□□ 0.52
VEGFA-231ENST00000640499 DAZAP1Q96EP5 407 aaKnown RBP18.32■□□□□ 0.52
VEGFA-231ENST00000640499 A0A087WWL8 130 aa18.31■□□□□ 0.52
VEGFA-231ENST00000640499 SRIP30626 198 aa18.31■□□□□ 0.52
VEGFA-231ENST00000640499 SRSF3P84103 164 aaKnown RBP18.31■□□□□ 0.52
VEGFA-231ENST00000640499 BIRC6Q9NR09 4857 aa18.3■□□□□ 0.52
VEGFA-231ENST00000640499 NBDYA0A0U1RRE5 68 aa18.3■□□□□ 0.52
VEGFA-231ENST00000640499 RTL8CO15255 209 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms