RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 PLEKHB2Q96CS7 222 aa3.15□□□□□ -1.91
CHD2-225ENST00000636861 C1orf43Q9BWL3 253 aa3.15□□□□□ -1.91
CHD2-225ENST00000636861 MRPL35Q9NZE8 188 aaKnown RBP3.15□□□□□ -1.91
CHD2-225ENST00000636861 GNG12Q9UBI6 72 aa3.15□□□□□ -1.91
CHD2-225ENST00000636861 LINC00527Q9UJ94 153 aa3.15□□□□□ -1.91
CHD2-225ENST00000636861 FREM1Q5H8C1 2179 aa3.15□□□□□ -1.91
CHD2-225ENST00000636861 EXPH5Q8NEV8 1989 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 STARD9Q9P2P6 4700 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 TRGV11A0A075B6L2 103 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 IGHV1-69DA0A0B4J2H0 117 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 LOC107984640A0A0U1RRK4 108 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 A0A1W2PPC4 97 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 RBAKDNA6NC62 111 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 LINC00473A8K010 186 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 ZNF785A8K8V0 405 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 OOSP1A8MZH6 123 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 C16orf97H3BN30 126 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 J3QLI3 93 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 UPK2O00526 184 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 SS18L1O75177 396 aaPredicted RBP3.14□□□□□ -1.91
CHD2-225ENST00000636861 PYYP10082 97 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 COX6A1P12074 109 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 PRDX2P32119 198 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 ATP5EP56381 51 aaPredicted RBP3.14□□□□□ -1.91
CHD2-225ENST00000636861 NPC2P61916 151 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 CCL8P80075 99 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 MRPS36P82909 103 aaKnown RBP3.14□□□□□ -1.91
CHD2-225ENST00000636861 FOXF2Q12947 444 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 PDE6HQ13956 83 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 MDP1Q86V88 176 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 ZCCHC24Q8N2G6 241 aaKnown RBP3.14□□□□□ -1.91
CHD2-225ENST00000636861 SLC25A45Q8N413 288 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 RFESDQ8TAC1 157 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 C1orf159Q96HA4 380 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 METTL26Q96S19 204 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 JPT2Q9H910 190 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 LAMTOR3Q9UHA4 124 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 MED12LQ86YW9 2145 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 KIAA1549Q9HCM3 1950 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 CR1P17927 2039 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 PKHD1P08F94 4074 aa3.14□□□□□ -1.91
CHD2-225ENST00000636861 IGHV1-45A0A0A0MS14 117 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 TIMM8AO60220 97 aaPredicted RBP3.13□□□□□ -1.91
CHD2-225ENST00000636861 NDUFA3O95167 84 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 PLAUP00749 431 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 RNASE2P10153 161 aaKnown RBP3.13□□□□□ -1.91
CHD2-225ENST00000636861 GP9P14770 177 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 LGALS3P17931 250 aaKnown RBP3.13□□□□□ -1.91
CHD2-225ENST00000636861 CD24P25063 80 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 PSMB8P28062 276 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 TNFRSF4P43489 277 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 DLX1P56177 255 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 HOXA4Q00056 320 aaPredicted RBP3.13□□□□□ -1.91
CHD2-225ENST00000636861 RPL18AQ02543 176 aaKnown RBP3.13□□□□□ -1.91
CHD2-225ENST00000636861 LOXL1Q08397 574 aaPredicted RBP3.13□□□□□ -1.91
CHD2-225ENST00000636861 C6orf226Q5I0X4 101 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 S100A7L2Q5SY68 101 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 MBNL2Q5VZF2 373 aaKnown RBP3.13□□□□□ -1.91
CHD2-225ENST00000636861 LYZL1Q6UWQ5 148 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 ZFP2Q6ZN57 461 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 Q6ZQT7 251 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 COX8CQ7Z4L0 72 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 SERP2Q8N6R1 65 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 POM121L12Q8N7R1 296 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 DAND5Q8N907 189 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 RNF125Q96EQ8 232 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 DPH3Q96FX2 82 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 C9orf85Q96MD7 179 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 OVOL2Q9BRP0 275 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 CNFNQ9BYD5 112 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 PEMTQ9UBM1 199 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 HSPG2P98160 4391 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 PLXNB1O43157 2135 aa3.13□□□□□ -1.91
CHD2-225ENST00000636861 DYNC1H1Q14204 4646 aaKnown RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 TRAV12-2A0A075B6T6 113 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 A0A0J9YW62 118 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 RBMY1BA6NDE4 496 aaKnown RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 MBD3L4A6NDZ8 208 aaPredicted RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 MBD3L3A6NE82 208 aaPredicted RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 RBMY1EA6NEQ0 496 aaKnown RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 SDHAF1A6NFY7 115 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 MBD3L5A6NJ08 208 aaPredicted RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 M0R3E3 92 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 MRPS12O15235 138 aaKnown RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 EFNA2O43921 213 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 MRPL33O75394 65 aaKnown RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 IGHV3-30P01768 117 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 IGHV3-33P01772 117 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 RBMY1DP0C7P1 496 aaKnown RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 IGHV3-30-5P0DP03 117 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 CD40P25942 277 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 PFN2P35080 140 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 GATA4P43694 442 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 NXPH1P58417 271 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 BRWD1-AS2P59051 145 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.12□□□□□ -1.91
CHD2-225ENST00000636861 C1orf195Q5TG92 126 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 ATP5EP2Q5VTU8 51 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 TMEM200BQ69YZ2 307 aa3.12□□□□□ -1.91
CHD2-225ENST00000636861 HRCT1Q6UXD1 115 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms