RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
SOX2-OT-246ENST00000628343 OR4C5Q8NGB2 326 aa9.44□□□□□ -0.9
SOX2-OT-246ENST00000628343 PTH2Q96A98 100 aa9.44□□□□□ -0.9
SOX2-OT-246ENST00000628343 IL36BQ9NZH7 164 aa9.44□□□□□ -0.9
SOX2-OT-246ENST00000628343 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
SOX2-OT-246ENST00000628343 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
SOX2-OT-246ENST00000628343 TRGV4A0A0C4DH28 118 aa9.43□□□□□ -0.9
SOX2-OT-246ENST00000628343 PAX4O43316 350 aa9.43□□□□□ -0.9
SOX2-OT-246ENST00000628343 GNG4P50150 75 aa9.43□□□□□ -0.9
SOX2-OT-246ENST00000628343 CRYBA4P53673 196 aa9.43□□□□□ -0.9
SOX2-OT-246ENST00000628343 RNF212Q495C1 297 aa9.43□□□□□ -0.9
SOX2-OT-246ENST00000628343 PRO0255Q9UI72 69 aa9.43□□□□□ -0.9
SOX2-OT-246ENST00000628343 HHLA3Q9XRX5 114 aa9.43□□□□□ -0.9
SOX2-OT-246ENST00000628343 A0A096LPF7 62 aa9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 RS1O15537 224 aa9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 ARMS2P0C7Q2 107 aa9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 MGST1P10620 155 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 SLAQ13239 276 aa9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 TOR2AQ5JU69 321 aa9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 CFAP126Q5VTH2 177 aa9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 PCNPQ8WW12 178 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 SCRT2Q9NQ03 307 aa9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
SOX2-OT-246ENST00000628343 SMIM12Q96EX1 92 aa9.41□□□□□ -0.9
SOX2-OT-246ENST00000628343 FAM210AQ96ND0 272 aa9.41□□□□□ -0.9
SOX2-OT-246ENST00000628343 C19orf71A6NCJ1 209 aa9.4□□□□□ -0.9
SOX2-OT-246ENST00000628343 TMEM250H0YL14 139 aa9.4□□□□□ -0.9
SOX2-OT-246ENST00000628343 GATA1P15976 413 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-246ENST00000628343 PIK3CD-AS1Q5SR53 167 aa9.4□□□□□ -0.9
SOX2-OT-246ENST00000628343 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
SOX2-OT-246ENST00000628343 PARLQ9H300 379 aa9.4□□□□□ -0.9
SOX2-OT-246ENST00000628343 JPT2Q9H910 190 aa9.4□□□□□ -0.9
SOX2-OT-246ENST00000628343 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
SOX2-OT-246ENST00000628343 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
SOX2-OT-246ENST00000628343 CXCL1P09341 107 aa9.39□□□□□ -0.91
SOX2-OT-246ENST00000628343 CCL18P55774 89 aa9.39□□□□□ -0.91
SOX2-OT-246ENST00000628343 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
SOX2-OT-246ENST00000628343 ESRGQ1W209 222 aa9.39□□□□□ -0.91
SOX2-OT-246ENST00000628343 ZNRF2Q8NHG8 242 aa9.39□□□□□ -0.91
SOX2-OT-246ENST00000628343 EIF5A2Q9GZV4 153 aaKnown RBP9.39□□□□□ -0.91
SOX2-OT-246ENST00000628343 IGLV2-18A0A075B6J9 118 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 K7EN84 100 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 K7EQD1 137 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 M0R381 172 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 GYPEP15421 78 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 UFSP1Q6NVU6 142 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
SOX2-OT-246ENST00000628343 A8MWV9 139 aa9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 M0R2N4 97 aa9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 SNAI2O43623 268 aa9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 CIDEAO60543 219 aa9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 CEBPGP53567 150 aa9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 SLC25A29Q8N8R3 303 aa9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 SYT8Q8NBV8 401 aa9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 DAZAP1Q96EP5 407 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 SSBP4Q9BWG4 385 aaPredicted RBP9.37□□□□□ -0.91
SOX2-OT-246ENST00000628343 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 NXPH4O95158 308 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 SRP19P09132 144 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 OR5AL1P0C617 328 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 GZMBP10144 247 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 ZFP2Q6ZN57 461 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 Q6ZR54 194 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 Q6ZSN1 163 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 ZFP82Q8N141 532 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 BIN3Q9NQY0 253 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 MRPS16Q9Y3D3 137 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 MUC4Q99102 2169 aa9.36□□□□□ -0.91
SOX2-OT-246ENST00000628343 DNAH6Q9C0G6 4158 aa9.35□□□□□ -0.91
SOX2-OT-246ENST00000628343 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
SOX2-OT-246ENST00000628343 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
SOX2-OT-246ENST00000628343 TRBV6-4A0A1B0GX49 114 aa9.35□□□□□ -0.91
SOX2-OT-246ENST00000628343 P01737 135 aa9.35□□□□□ -0.91
SOX2-OT-246ENST00000628343 SRIP30626 198 aa9.35□□□□□ -0.91
SOX2-OT-246ENST00000628343 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
SOX2-OT-246ENST00000628343 SFRP2Q96HF1 295 aa9.35□□□□□ -0.91
SOX2-OT-246ENST00000628343 UPK3BQ9BT76 320 aa9.35□□□□□ -0.91
SOX2-OT-246ENST00000628343 A0A087WWL8 130 aa9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 C9JQL5 133 aa9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 CRYGDP07320 174 aa9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 IGLC6P0CF74 106 aa9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 RPS20P60866 119 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 RHOHQ15669 191 aa9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 LYPD5Q6UWN5 251 aa9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 RNASE7Q9H1E1 156 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-246ENST00000628343 RHODO00212 210 aa9.33□□□□□ -0.92
SOX2-OT-246ENST00000628343 FAM74A4Q5TZK3 123 aa9.33□□□□□ -0.92
SOX2-OT-246ENST00000628343 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
SOX2-OT-246ENST00000628343 SMIM7Q9BQ49 75 aa9.33□□□□□ -0.92
SOX2-OT-246ENST00000628343 PRADC1Q9BSG0 188 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms