RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 RYR2Q92736 4967 aa14.22□□□□□ -0.13
PTCD3-220ENST00000627371 TRAV26-1A0A087WT03 109 aa14.22□□□□□ -0.13
PTCD3-220ENST00000627371 SRP19P09132 144 aaKnown RBP14.22□□□□□ -0.13
PTCD3-220ENST00000627371 ARMS2P0C7Q2 107 aa14.22□□□□□ -0.13
PTCD3-220ENST00000627371 CEBPGP53567 150 aa14.22□□□□□ -0.13
PTCD3-220ENST00000627371 POM121L12Q8N7R1 296 aa14.22□□□□□ -0.13
PTCD3-220ENST00000627371 RYR3Q15413 4870 aa14.22□□□□□ -0.13
PTCD3-220ENST00000627371 C19orf71A6NCJ1 209 aa14.21□□□□□ -0.13
PTCD3-220ENST00000627371 LY6G6CO95867 125 aa14.21□□□□□ -0.13
PTCD3-220ENST00000627371 PIK3CD-AS1Q5SR53 167 aa14.21□□□□□ -0.13
PTCD3-220ENST00000627371 DAZAP1Q96EP5 407 aaKnown RBP14.21□□□□□ -0.13
PTCD3-220ENST00000627371 ZNF479Q96JC4 524 aa14.21□□□□□ -0.13
PTCD3-220ENST00000627371 SCRT2Q9NQ03 307 aa14.21□□□□□ -0.13
PTCD3-220ENST00000627371 H3BNG1 76 aa14.2□□□□□ -0.14
PTCD3-220ENST00000627371 SFTA3P0C7M3 94 aa14.2□□□□□ -0.14
PTCD3-220ENST00000627371 MED14OSP0DP75 135 aa14.2□□□□□ -0.14
PTCD3-220ENST00000627371 RAB14P61106 215 aa14.2□□□□□ -0.14
PTCD3-220ENST00000627371 FHL2Q14192 279 aa14.2□□□□□ -0.14
PTCD3-220ENST00000627371 OR4C5Q8NGB2 326 aa14.2□□□□□ -0.14
PTCD3-220ENST00000627371 OCC1Q8TAD7 63 aa14.2□□□□□ -0.14
PTCD3-220ENST00000627371 HYDINQ4G0P3 5121 aa14.2□□□□□ -0.14
PTCD3-220ENST00000627371 A0A0J9YY99 117 aa14.19□□□□□ -0.14
PTCD3-220ENST00000627371 SMDT1Q9H4I9 107 aa14.19□□□□□ -0.14
PTCD3-220ENST00000627371 TRGV4A0A0C4DH28 118 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 K7EN84 100 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 RS1O15537 224 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 P01737 135 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 IFITM2Q01629 132 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 SLAQ13239 276 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 PEA15Q15121 130 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 VSIG2Q96IQ7 327 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 SMIM7Q9BQ49 75 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 PRO0255Q9UI72 69 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 PHLDA3Q9Y5J5 127 aa14.18□□□□□ -0.14
PTCD3-220ENST00000627371 KMT2AQ03164 3969 aa14.17□□□□□ -0.14
PTCD3-220ENST00000627371 NUDT3O95989 172 aa14.17□□□□□ -0.14
PTCD3-220ENST00000627371 P0DMU3 169 aa14.17□□□□□ -0.14
PTCD3-220ENST00000627371 FAM231AP0DMU4 169 aa14.17□□□□□ -0.14
PTCD3-220ENST00000627371 FAM231CP0DMU5 169 aa14.17□□□□□ -0.14
PTCD3-220ENST00000627371 SRSF3P84103 164 aaKnown RBP14.17□□□□□ -0.14
PTCD3-220ENST00000627371 CFAP126Q5VTH2 177 aa14.17□□□□□ -0.14
PTCD3-220ENST00000627371 SYT8Q8NBV8 401 aa14.17□□□□□ -0.14
PTCD3-220ENST00000627371 LY96Q9Y6Y9 160 aa14.17□□□□□ -0.14
PTCD3-220ENST00000627371 ZNF727A8MUV8 499 aa14.16□□□□□ -0.14
PTCD3-220ENST00000627371 C9JQL5 133 aa14.16□□□□□ -0.14
PTCD3-220ENST00000627371 CIDEAO60543 219 aa14.16□□□□□ -0.14
PTCD3-220ENST00000627371 CRYBA4P53673 196 aa14.16□□□□□ -0.14
PTCD3-220ENST00000627371 RPS20P60866 119 aaKnown RBP14.16□□□□□ -0.14
PTCD3-220ENST00000627371 DMRTA1Q5VZB9 504 aa14.16□□□□□ -0.14
PTCD3-220ENST00000627371 OR2D3Q8NGH3 330 aa14.16□□□□□ -0.14
PTCD3-220ENST00000627371 HHLA3Q9XRX5 114 aa14.16□□□□□ -0.14
PTCD3-220ENST00000627371 DNAH6Q9C0G6 4158 aa14.15□□□□□ -0.14
PTCD3-220ENST00000627371 A8MWV9 139 aa14.15□□□□□ -0.14
PTCD3-220ENST00000627371 PAX4O43316 350 aa14.15□□□□□ -0.14
PTCD3-220ENST00000627371 SNAI2O43623 268 aa14.15□□□□□ -0.14
PTCD3-220ENST00000627371 OR5AL1P0C617 328 aa14.15□□□□□ -0.14
PTCD3-220ENST00000627371 CLLU1Q5K131 121 aa14.15□□□□□ -0.14
PTCD3-220ENST00000627371 ZFP82Q8N141 532 aa14.15□□□□□ -0.14
PTCD3-220ENST00000627371 NUDT10Q8NFP7 164 aa14.15□□□□□ -0.14
PTCD3-220ENST00000627371 NUDT11Q96G61 164 aa14.15□□□□□ -0.14
PTCD3-220ENST00000627371 SSBP4Q9BWG4 385 aaPredicted RBP14.15□□□□□ -0.14
PTCD3-220ENST00000627371 FAM74A3Q4VXF1 159 aa14.14□□□□□ -0.15
PTCD3-220ENST00000627371 RNASE7Q9H1E1 156 aaKnown RBP14.14□□□□□ -0.15
PTCD3-220ENST00000627371 XKRY2A2RUG3 117 aa14.13□□□□□ -0.15
PTCD3-220ENST00000627371 M0R381 172 aa14.13□□□□□ -0.15
PTCD3-220ENST00000627371 NXPH4O95158 308 aa14.13□□□□□ -0.15
PTCD3-220ENST00000627371 GATA1P15976 413 aaPredicted RBP14.13□□□□□ -0.15
PTCD3-220ENST00000627371 LINC01551Q86U37 167 aa14.13□□□□□ -0.15
PTCD3-220ENST00000627371 IGLC6P0CF74 106 aa14.12□□□□□ -0.15
PTCD3-220ENST00000627371 GZMBP10144 247 aa14.12□□□□□ -0.15
PTCD3-220ENST00000627371 ZFP2Q6ZN57 461 aa14.12□□□□□ -0.15
PTCD3-220ENST00000627371 FAM231DQ6ZW35 169 aa14.12□□□□□ -0.15
PTCD3-220ENST00000627371 OR10AG1Q8NH19 301 aa14.12□□□□□ -0.15
PTCD3-220ENST00000627371 RPP21Q9H633 154 aaKnown RBP14.12□□□□□ -0.15
PTCD3-220ENST00000627371 JPT2Q9H910 190 aa14.12□□□□□ -0.15
PTCD3-220ENST00000627371 A0A096LPF7 62 aa14.11□□□□□ -0.15
PTCD3-220ENST00000627371 RNF212Q495C1 297 aa14.11□□□□□ -0.15
PTCD3-220ENST00000627371 UBE2DNLQ8IWF7 75 aa14.11□□□□□ -0.15
PTCD3-220ENST00000627371 FER1L6-AS1Q8NA97 138 aa14.11□□□□□ -0.15
PTCD3-220ENST00000627371 ICOSQ9Y6W8 199 aa14.11□□□□□ -0.15
PTCD3-220ENST00000627371 IGHV3-73A0A0B4J1V6 119 aa14.1□□□□□ -0.15
PTCD3-220ENST00000627371 UFSP1Q6NVU6 142 aa14.1□□□□□ -0.15
PTCD3-220ENST00000627371 SFRP2Q96HF1 295 aa14.1□□□□□ -0.15
PTCD3-220ENST00000627371 RHODO00212 210 aa14.09□□□□□ -0.15
PTCD3-220ENST00000627371 TMEM241Q24JQ0 296 aa14.09□□□□□ -0.15
PTCD3-220ENST00000627371 SPANXN1Q5VSR9 72 aa14.09□□□□□ -0.15
PTCD3-220ENST00000627371 SAMD10Q9BYL1 202 aa14.09□□□□□ -0.15
PTCD3-220ENST00000627371 TRBV6-4A0A1B0GX49 114 aa14.08□□□□□ -0.16
PTCD3-220ENST00000627371 A0A1W2PPQ1 181 aa14.08□□□□□ -0.16
PTCD3-220ENST00000627371 CCL18P55774 89 aa14.08□□□□□ -0.16
PTCD3-220ENST00000627371 ERVFC1-1P60608 527 aa14.08□□□□□ -0.16
PTCD3-220ENST00000627371 SOHLH1Q5JUK2 328 aa14.08□□□□□ -0.16
PTCD3-220ENST00000627371 TPPP3Q9BW30 176 aa14.08□□□□□ -0.16
PTCD3-220ENST00000627371 NAT8Q9UHE5 227 aa14.08□□□□□ -0.16
PTCD3-220ENST00000627371 MUC21A0A0G2JKD1 596 aa14.07□□□□□ -0.16
PTCD3-220ENST00000627371 MUC21A0A140T8X8 626 aa14.07□□□□□ -0.16
PTCD3-220ENST00000627371 K7EQD1 137 aa14.07□□□□□ -0.16
PTCD3-220ENST00000627371 GATCO43716 136 aaKnown RBP14.07□□□□□ -0.16
PTCD3-220ENST00000627371 GYPEP15421 78 aa14.07□□□□□ -0.16
PTCD3-220ENST00000627371 RHOHQ15669 191 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms