RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 MED9Q9NWA0 146 aa10.09□□□□□ -0.79
SOX2-OT-237ENST00000625581 IL36BQ9NZH7 164 aa10.09□□□□□ -0.79
SOX2-OT-237ENST00000625581 TMSB15BA0A087X1C1 80 aa10.08□□□□□ -0.8
SOX2-OT-237ENST00000625581 GRIFINA4D1Z8 144 aa10.08□□□□□ -0.8
SOX2-OT-237ENST00000625581 PGPEP1LA6NFU8 196 aa10.08□□□□□ -0.8
SOX2-OT-237ENST00000625581 RPL19P84098 196 aaKnown RBP10.08□□□□□ -0.8
SOX2-OT-237ENST00000625581 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
SOX2-OT-237ENST00000625581 PRR27Q6MZM9 219 aa10.08□□□□□ -0.8
SOX2-OT-237ENST00000625581 PCNPQ8WW12 178 aaKnown RBP10.08□□□□□ -0.8
SOX2-OT-237ENST00000625581 SMIM12Q96EX1 92 aa10.08□□□□□ -0.8
SOX2-OT-237ENST00000625581 C9JCJ5 164 aa10.07□□□□□ -0.8
SOX2-OT-237ENST00000625581 S100A4P26447 101 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-237ENST00000625581 GNG4P50150 75 aa10.07□□□□□ -0.8
SOX2-OT-237ENST00000625581 CRYBA4P53673 196 aa10.07□□□□□ -0.8
SOX2-OT-237ENST00000625581 TOR2AQ5JU69 321 aa10.07□□□□□ -0.8
SOX2-OT-237ENST00000625581 FAM210AQ96ND0 272 aa10.07□□□□□ -0.8
SOX2-OT-237ENST00000625581 SCRT2Q9NQ03 307 aa10.07□□□□□ -0.8
SOX2-OT-237ENST00000625581 A0A096LPF7 62 aa10.06□□□□□ -0.8
SOX2-OT-237ENST00000625581 TMEM250H0YL14 139 aa10.06□□□□□ -0.8
SOX2-OT-237ENST00000625581 RS1O15537 224 aa10.06□□□□□ -0.8
SOX2-OT-237ENST00000625581 CXCL1P09341 107 aa10.06□□□□□ -0.8
SOX2-OT-237ENST00000625581 ARMS2P0C7Q2 107 aa10.06□□□□□ -0.8
SOX2-OT-237ENST00000625581 PIK3CD-AS1Q5SR53 167 aa10.06□□□□□ -0.8
SOX2-OT-237ENST00000625581 CFAP126Q5VTH2 177 aa10.06□□□□□ -0.8
SOX2-OT-237ENST00000625581 OR4C5Q8NGB2 326 aa10.06□□□□□ -0.8
SOX2-OT-237ENST00000625581 PRO0255Q9UI72 69 aa10.06□□□□□ -0.8
SOX2-OT-237ENST00000625581 FRAS1Q86XX4 4008 aa10.05□□□□□ -0.8
SOX2-OT-237ENST00000625581 TRGV4A0A0C4DH28 118 aa10.05□□□□□ -0.8
SOX2-OT-237ENST00000625581 C19orf71A6NCJ1 209 aa10.05□□□□□ -0.8
SOX2-OT-237ENST00000625581 RNF212Q495C1 297 aa10.05□□□□□ -0.8
SOX2-OT-237ENST00000625581 PARLQ9H300 379 aa10.05□□□□□ -0.8
SOX2-OT-237ENST00000625581 HHLA3Q9XRX5 114 aa10.05□□□□□ -0.8
SOX2-OT-237ENST00000625581 PAX4O43316 350 aa10.04□□□□□ -0.8
SOX2-OT-237ENST00000625581 NDUFS6O75380 124 aaKnown RBP10.04□□□□□ -0.8
SOX2-OT-237ENST00000625581 MED14OSP0DP75 135 aa10.04□□□□□ -0.8
SOX2-OT-237ENST00000625581 MGST1P10620 155 aaKnown RBP10.04□□□□□ -0.8
SOX2-OT-237ENST00000625581 GATA1P15976 413 aaPredicted RBP10.04□□□□□ -0.8
SOX2-OT-237ENST00000625581 SLAQ13239 276 aa10.04□□□□□ -0.8
SOX2-OT-237ENST00000625581 UBE2DNLQ8IWF7 75 aa10.04□□□□□ -0.8
SOX2-OT-237ENST00000625581 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
SOX2-OT-237ENST00000625581 K7EN84 100 aa10.03□□□□□ -0.8
SOX2-OT-237ENST00000625581 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
SOX2-OT-237ENST00000625581 UFSP1Q6NVU6 142 aa10.03□□□□□ -0.8
SOX2-OT-237ENST00000625581 EIF5A2Q9GZV4 153 aaKnown RBP10.03□□□□□ -0.8
SOX2-OT-237ENST00000625581 JPT2Q9H910 190 aa10.03□□□□□ -0.8
SOX2-OT-237ENST00000625581 SNAI2O43623 268 aa10.02□□□□□ -0.81
SOX2-OT-237ENST00000625581 NXPH4O95158 308 aa10.02□□□□□ -0.81
SOX2-OT-237ENST00000625581 SRP19P09132 144 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-237ENST00000625581 ICOSQ9Y6W8 199 aa10.02□□□□□ -0.81
SOX2-OT-237ENST00000625581 EPPK1P58107 5090 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-237ENST00000625581 IGHV3-73A0A0B4J1V6 119 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 LOC100131303A0A0U1RQF7 123 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 A8MWV9 139 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 K7EQD1 137 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 CIDEAO60543 219 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 FAM3BP58499 235 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 ESRGQ1W209 222 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 OR10AG1Q8NH19 301 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 ZNRF2Q8NHG8 242 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 OCC1Q8TAD7 63 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 SSBP4Q9BWG4 385 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 SAMD10Q9BYL1 202 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 PHLDA3Q9Y5J5 127 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 DNAH10Q8IVF4 4471 aa10.01□□□□□ -0.81
SOX2-OT-237ENST00000625581 C9JQL5 133 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 M0R381 172 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 OR5AL1P0C617 328 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 IGLC6P0CF74 106 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 GZMBP10144 247 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 CCL18P55774 89 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 ZFP2Q6ZN57 461 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 Q6ZSN1 163 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 ZFP82Q8N141 532 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 SLC25A29Q8N8R3 303 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 SYT8Q8NBV8 401 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 OR2D3Q8NGH3 330 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 DNAH2Q9P225 4427 aa10□□□□□ -0.81
SOX2-OT-237ENST00000625581 P01737 135 aa9.99□□□□□ -0.81
SOX2-OT-237ENST00000625581 GYPEP15421 78 aa9.99□□□□□ -0.81
SOX2-OT-237ENST00000625581 CEBPGP53567 150 aa9.99□□□□□ -0.81
SOX2-OT-237ENST00000625581 SRSF3P84103 164 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-237ENST00000625581 MRPL23Q16540 153 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-237ENST00000625581 DAZAP1Q96EP5 407 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-237ENST00000625581 SFRP2Q96HF1 295 aa9.99□□□□□ -0.81
SOX2-OT-237ENST00000625581 BIN3Q9NQY0 253 aa9.99□□□□□ -0.81
SOX2-OT-237ENST00000625581 MRPS16Q9Y3D3 137 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-237ENST00000625581 IGLV2-18A0A075B6J9 118 aa9.98□□□□□ -0.81
SOX2-OT-237ENST00000625581 TRBV6-4A0A1B0GX49 114 aa9.98□□□□□ -0.81
SOX2-OT-237ENST00000625581 CRYGDP07320 174 aa9.98□□□□□ -0.81
SOX2-OT-237ENST00000625581 Q6ZR54 194 aa9.98□□□□□ -0.81
SOX2-OT-237ENST00000625581 NUDT10Q8NFP7 164 aa9.98□□□□□ -0.81
SOX2-OT-237ENST00000625581 NUDT11Q96G61 164 aa9.98□□□□□ -0.81
SOX2-OT-237ENST00000625581 SMIM7Q9BQ49 75 aa9.98□□□□□ -0.81
SOX2-OT-237ENST00000625581 UPK3BQ9BT76 320 aa9.98□□□□□ -0.81
SOX2-OT-237ENST00000625581 RNASE7Q9H1E1 156 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-237ENST00000625581 A0A087WWL8 130 aa9.97□□□□□ -0.81
SOX2-OT-237ENST00000625581 MUC21A0A0G2JKD1 596 aa9.97□□□□□ -0.81
SOX2-OT-237ENST00000625581 MUC21A0A140T8X8 626 aa9.97□□□□□ -0.81
SOX2-OT-237ENST00000625581 SRIP30626 198 aa9.97□□□□□ -0.81
SOX2-OT-237ENST00000625581 RPS20P60866 119 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms