RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 ZNF506Q5JVG8 444 aa9.7□□□□□ -0.86
PCDHGC3-208ENST00000622836 PRR27Q6MZM9 219 aa9.7□□□□□ -0.86
PCDHGC3-208ENST00000622836 PDE6DO43924 150 aa9.69□□□□□ -0.86
PCDHGC3-208ENST00000622836 SRIP30626 198 aa9.69□□□□□ -0.86
PCDHGC3-208ENST00000622836 BLOC1S1P78537 153 aa9.69□□□□□ -0.86
PCDHGC3-208ENST00000622836 ESRGQ1W209 222 aa9.69□□□□□ -0.86
PCDHGC3-208ENST00000622836 SYT8Q8NBV8 401 aa9.69□□□□□ -0.86
PCDHGC3-208ENST00000622836 ZNRF2Q8NHG8 242 aa9.69□□□□□ -0.86
PCDHGC3-208ENST00000622836 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
PCDHGC3-208ENST00000622836 MED9Q9NWA0 146 aa9.69□□□□□ -0.86
PCDHGC3-208ENST00000622836 IL36BQ9NZH7 164 aa9.69□□□□□ -0.86
PCDHGC3-208ENST00000622836 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 RS1O15537 224 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 ARMS2P0C7Q2 107 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 GYPEP15421 78 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 TAGLN2P37802 199 aaKnown RBP9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 CFAP126Q5VTH2 177 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 PTH2Q96A98 100 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 DERL1Q9BUN8 251 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 VAX2Q9UIW0 290 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 BOLA1Q9Y3E2 137 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 PHLDA3Q9Y5J5 127 aa9.68□□□□□ -0.86
PCDHGC3-208ENST00000622836 CIDEAO60543 219 aa9.67□□□□□ -0.86
PCDHGC3-208ENST00000622836 MGST1P10620 155 aaKnown RBP9.67□□□□□ -0.86
PCDHGC3-208ENST00000622836 CENPWQ5EE01 88 aa9.67□□□□□ -0.86
PCDHGC3-208ENST00000622836 NEGR1Q7Z3B1 354 aa9.67□□□□□ -0.86
PCDHGC3-208ENST00000622836 Q9H8V8 135 aa9.67□□□□□ -0.86
PCDHGC3-208ENST00000622836 MRPS16Q9Y3D3 137 aaKnown RBP9.67□□□□□ -0.86
PCDHGC3-208ENST00000622836 NBDYA0A0U1RRE5 68 aa9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 A8MWV9 139 aa9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 K7EQD1 137 aa9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 GATA1P15976 413 aaPredicted RBP9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 GNG4P50150 75 aa9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 SOHLH1Q5JUK2 328 aa9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 DNLZQ5SXM8 178 aa9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 DAZAP1Q96EP5 407 aaKnown RBP9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 PRADC1Q9BSG0 188 aa9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 MLST8Q9BVC4 326 aa9.66□□□□□ -0.86
PCDHGC3-208ENST00000622836 DNAH6Q9C0G6 4158 aa9.65□□□□□ -0.86
PCDHGC3-208ENST00000622836 RAB19A4D1S5 217 aa9.65□□□□□ -0.86
PCDHGC3-208ENST00000622836 M0R381 172 aa9.65□□□□□ -0.86
PCDHGC3-208ENST00000622836 RPL19P84098 196 aaKnown RBP9.65□□□□□ -0.86
PCDHGC3-208ENST00000622836 PIK3CD-AS1Q5SR53 167 aa9.65□□□□□ -0.86
PCDHGC3-208ENST00000622836 Q6ZR54 194 aa9.65□□□□□ -0.86
PCDHGC3-208ENST00000622836 UPK3BQ9BT76 320 aa9.65□□□□□ -0.86
PCDHGC3-208ENST00000622836 LOC100131303A0A0U1RQF7 123 aa9.64□□□□□ -0.87
PCDHGC3-208ENST00000622836 RHOHQ15669 191 aa9.64□□□□□ -0.87
PCDHGC3-208ENST00000622836 TTC32Q5I0X7 151 aa9.64□□□□□ -0.87
PCDHGC3-208ENST00000622836 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
PCDHGC3-208ENST00000622836 DMRTA1Q5VZB9 504 aa9.64□□□□□ -0.87
PCDHGC3-208ENST00000622836 LYPD5Q6UWN5 251 aa9.64□□□□□ -0.87
PCDHGC3-208ENST00000622836 LINC00336Q6ZUF6 198 aa9.64□□□□□ -0.87
PCDHGC3-208ENST00000622836 SLC25A29Q8N8R3 303 aa9.64□□□□□ -0.87
PCDHGC3-208ENST00000622836 PARLQ9H300 379 aa9.64□□□□□ -0.87
PCDHGC3-208ENST00000622836 TRBV6-4A0A1B0GX49 114 aa9.63□□□□□ -0.87
PCDHGC3-208ENST00000622836 RBFOX3A6NFN3 312 aa9.63□□□□□ -0.87
PCDHGC3-208ENST00000622836 NXPH4O95158 308 aa9.63□□□□□ -0.87
PCDHGC3-208ENST00000622836 FAM74A4Q5TZK3 123 aa9.63□□□□□ -0.87
PCDHGC3-208ENST00000622836 SH2D6Q7Z4S9 175 aa9.63□□□□□ -0.87
PCDHGC3-208ENST00000622836 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
PCDHGC3-208ENST00000622836 SMIM12Q96EX1 92 aa9.63□□□□□ -0.87
PCDHGC3-208ENST00000622836 JPT2Q9H910 190 aa9.63□□□□□ -0.87
PCDHGC3-208ENST00000622836 RHODO00212 210 aa9.62□□□□□ -0.87
PCDHGC3-208ENST00000622836 MED14OSP0DP75 135 aa9.62□□□□□ -0.87
PCDHGC3-208ENST00000622836 ZFP2Q6ZN57 461 aa9.62□□□□□ -0.87
PCDHGC3-208ENST00000622836 SCRT2Q9NQ03 307 aa9.62□□□□□ -0.87
PCDHGC3-208ENST00000622836 BIN3Q9NQY0 253 aa9.62□□□□□ -0.87
PCDHGC3-208ENST00000622836 EPPK1P58107 5090 aaKnown RBP9.62□□□□□ -0.87
PCDHGC3-208ENST00000622836 A0A087WWL8 130 aa9.61□□□□□ -0.87
PCDHGC3-208ENST00000622836 PRSS29PA6NIE9 313 aa9.61□□□□□ -0.87
PCDHGC3-208ENST00000622836 SIVA1O15304 175 aa9.61□□□□□ -0.87
PCDHGC3-208ENST00000622836 CXCL1P09341 107 aa9.61□□□□□ -0.87
PCDHGC3-208ENST00000622836 CEBPGP53567 150 aa9.61□□□□□ -0.87
PCDHGC3-208ENST00000622836 SPANXN1Q5VSR9 72 aa9.61□□□□□ -0.87
PCDHGC3-208ENST00000622836 SAMD10Q9BYL1 202 aa9.61□□□□□ -0.87
PCDHGC3-208ENST00000622836 EIF5A2Q9GZV4 153 aaKnown RBP9.61□□□□□ -0.87
PCDHGC3-208ENST00000622836 RTL8CO15255 209 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 IGLV2-8P01709 118 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 P01737 135 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 RPS20P60866 119 aaKnown RBP9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 SSTP61278 116 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 TOR2AQ5JU69 321 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 ZNF575Q86XF7 245 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 C6orf223Q8N319 242 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 OR2D3Q8NGH3 330 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 LYPD6BQ8NI32 183 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 SFRP2Q96HF1 295 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 TPPP3Q9BW30 176 aa9.6□□□□□ -0.87
PCDHGC3-208ENST00000622836 TRBV20OR9-2A0A075B6H5 130 aa9.59□□□□□ -0.87
PCDHGC3-208ENST00000622836 MUC21A0A0G2JKD1 596 aa9.59□□□□□ -0.87
PCDHGC3-208ENST00000622836 MUC21A0A140T8X8 626 aa9.59□□□□□ -0.87
PCDHGC3-208ENST00000622836 XKRY2A2RUG3 117 aa9.59□□□□□ -0.87
PCDHGC3-208ENST00000622836 TMEM250H0YL14 139 aa9.59□□□□□ -0.87
PCDHGC3-208ENST00000622836 OR10AG1Q8NH19 301 aa9.59□□□□□ -0.87
PCDHGC3-208ENST00000622836 A0A1W2PPQ1 181 aa9.58□□□□□ -0.88
PCDHGC3-208ENST00000622836 GAGE12JA6NER3 117 aa9.58□□□□□ -0.88
PCDHGC3-208ENST00000622836 SNAI2O43623 268 aa9.58□□□□□ -0.88
PCDHGC3-208ENST00000622836 OR5AL1P0C617 328 aa9.58□□□□□ -0.88
PCDHGC3-208ENST00000622836 GZMBP10144 247 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms