RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 AZU1P20160 251 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 REC114Q7Z4M0 266 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 ALKBH7Q9BT30 221 aaPredicted RBP7.81□□□□□ -1.16
VPS11-208ENST00000621676 LY96Q9Y6Y9 160 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 SOCS3O14543 225 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 RNASE1P07998 156 aaKnown RBP7.81□□□□□ -1.16
VPS11-208ENST00000621676 RAB4AP20338 218 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 CRIP2P52943 208 aaPredicted RBP7.81□□□□□ -1.16
VPS11-208ENST00000621676 ZNF56Q15929 161 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 WDR73Q6P4I2 378 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 FA2HQ7L5A8 372 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 RBMY1BA6NDE4 496 aaKnown RBP7.81□□□□□ -1.16
VPS11-208ENST00000621676 RBMY1EA6NEQ0 496 aaKnown RBP7.81□□□□□ -1.16
VPS11-208ENST00000621676 RBMY1DP0C7P1 496 aaKnown RBP7.81□□□□□ -1.16
VPS11-208ENST00000621676 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 ZC2HC1BQ5TFG8 222 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 TRAV21A0A0B4J279 112 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 A0A0J9YX75 114 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 OR4C46A6NHA9 309 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 DDTP30046 118 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 ASIPP42127 132 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 FAM231DQ6ZW35 169 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 MAP6D1Q9H9H5 199 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 A0A096LPF7 62 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 CDKN1BP46527 198 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 ODF3L2Q3SX64 289 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 ZNF575Q86XF7 245 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 LOC102724200A0A096LPH7 203 aaPredicted RBP7.8□□□□□ -1.16
VPS11-208ENST00000621676 OR11H12B2RN74 326 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 TYMSP04818 313 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 DEFB130BP0DP73 79 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 DEFB130AP0DP74 79 aa7.8□□□□□ -1.16
VPS11-208ENST00000621676 PHLDA1Q8WV24 401 aaPredicted RBP7.8□□□□□ -1.16
VPS11-208ENST00000621676 RNASE13Q5GAN3 156 aaKnown RBP7.79□□□□□ -1.16
VPS11-208ENST00000621676 C3orf56Q8N813 242 aa7.79□□□□□ -1.16
VPS11-208ENST00000621676 TENM2Q9NT68 2774 aa7.79□□□□□ -1.16
VPS11-208ENST00000621676 HTN3P15516 51 aa7.79□□□□□ -1.16
VPS11-208ENST00000621676 PKIAP61925 76 aa7.79□□□□□ -1.16
VPS11-208ENST00000621676 FBLL1A6NHQ2 334 aaKnown RBP7.78□□□□□ -1.16
VPS11-208ENST00000621676 SMIM17P0DL12 118 aa7.78□□□□□ -1.16
VPS11-208ENST00000621676 C9orf47Q6ZRZ4 202 aa7.78□□□□□ -1.16
VPS11-208ENST00000621676 SMIM15Q7Z3B0 74 aa7.78□□□□□ -1.16
VPS11-208ENST00000621676 MRAPQ8TCY5 172 aa7.78□□□□□ -1.16
VPS11-208ENST00000621676 STAB2Q8WWQ8 2551 aa7.78□□□□□ -1.16
VPS11-208ENST00000621676 TRGV1A0A0A0MS02 117 aa7.78□□□□□ -1.16
VPS11-208ENST00000621676 CRLF1O75462 422 aa7.78□□□□□ -1.16
VPS11-208ENST00000621676 LINC00614P0C842 121 aa7.78□□□□□ -1.16
VPS11-208ENST00000621676 A0A087X0K7 114 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 TSTD3H0UI37 97 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 URB1-AS1Q96HZ7 61 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 C7orf71A4D174 169 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 H3BMM0 161 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 C3orf79P0CE67 100 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 AP5S1Q9NUS5 200 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 A0A1B0GXF2 115 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 K7EMT4 169 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 ZNF324O75467 553 aaPredicted RBP7.77□□□□□ -1.17
VPS11-208ENST00000621676 RNASE3P12724 160 aaKnown RBP7.77□□□□□ -1.17
VPS11-208ENST00000621676 FAM104BQ5XKR9 115 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 ZNF705AQ6ZN79 300 aaPredicted RBP7.77□□□□□ -1.17
VPS11-208ENST00000621676 ORMDL3Q8N138 153 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 SIGLEC8Q9NYZ4 499 aa7.77□□□□□ -1.17
VPS11-208ENST00000621676 hDV102S1A0JD36 115 aa7.76□□□□□ -1.17
VPS11-208ENST00000621676 LEPROTL1O95214 131 aa7.76□□□□□ -1.17
VPS11-208ENST00000621676 NPIPB6E9PJ23 425 aa7.76□□□□□ -1.17
VPS11-208ENST00000621676 PRSS1P07477 247 aa7.76□□□□□ -1.17
VPS11-208ENST00000621676 OR5AL1P0C617 328 aa7.76□□□□□ -1.17
VPS11-208ENST00000621676 SPATA12Q7Z6I5 190 aa7.76□□□□□ -1.17
VPS11-208ENST00000621676 NOP10Q9NPE3 64 aaKnown RBP7.76□□□□□ -1.17
VPS11-208ENST00000621676 MT-ND6P03923 174 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 DEFB135Q30KP9 77 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 ERASQ7Z444 233 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 FAM110AQ9BQ89 295 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 KRTAP24-1Q3LI83 254 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 TTTY13Q9BZ97 58 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 IGHV1-24A0A0C4DH33 117 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 GAGE12BA1L429 117 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 GAGE7O76087 117 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 GAGE12FP0CL80 117 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 GAGE12GP0CL81 117 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 GAGE12IP0CL82 117 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 LEPP41159 167 aa7.75□□□□□ -1.17
VPS11-208ENST00000621676 OPRPNQ99935 248 aaPredicted RBP7.75□□□□□ -1.17
VPS11-208ENST00000621676 ADARB2-AS1A8MUL3 147 aa7.74□□□□□ -1.17
VPS11-208ENST00000621676 DNLZQ5SXM8 178 aa7.74□□□□□ -1.17
VPS11-208ENST00000621676 ZNF664Q8N3J9 261 aa7.74□□□□□ -1.17
VPS11-208ENST00000621676 IGHV1OR15-1A0A075B7D0 117 aa7.74□□□□□ -1.17
VPS11-208ENST00000621676 CEMP1Q6PRD7 247 aaPredicted RBP7.74□□□□□ -1.17
VPS11-208ENST00000621676 Q8N2B8 174 aa7.74□□□□□ -1.17
VPS11-208ENST00000621676 JMJD8Q96S16 334 aa7.74□□□□□ -1.17
VPS11-208ENST00000621676 SCGB2A2Q13296 93 aa7.73□□□□□ -1.17
VPS11-208ENST00000621676 STPG4Q8N801 248 aa7.73□□□□□ -1.17
VPS11-208ENST00000621676 IGLC6P0CF74 106 aa7.73□□□□□ -1.17
VPS11-208ENST00000621676 JOSD1Q15040 202 aaPredicted RBP7.73□□□□□ -1.17
VPS11-208ENST00000621676 MYOZ3Q8TDC0 251 aa7.73□□□□□ -1.17
VPS11-208ENST00000621676 C2orf88Q9BSF0 95 aa7.73□□□□□ -1.17
VPS11-208ENST00000621676 TGP01266 2768 aa7.73□□□□□ -1.17
VPS11-208ENST00000621676 CRXO43186 299 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms