RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 NRGNQ92686 78 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 IGHV4-59P01825 116 aa7.41□□□□□ -1.22
COL12A1-211ENST00000615798 P0DMU3 169 aa7.4□□□□□ -1.22
COL12A1-211ENST00000615798 FAM231AP0DMU4 169 aa7.4□□□□□ -1.22
COL12A1-211ENST00000615798 FAM231CP0DMU5 169 aa7.4□□□□□ -1.22
COL12A1-211ENST00000615798 C17orf77Q96MU5 243 aa7.4□□□□□ -1.22
COL12A1-211ENST00000615798 TMEM133Q9H2Q1 129 aa7.4□□□□□ -1.22
COL12A1-211ENST00000615798 LOC101059948A0A1B0GTJ6 334 aa7.4□□□□□ -1.22
COL12A1-211ENST00000615798 FXYD2P54710 66 aa7.4□□□□□ -1.22
COL12A1-211ENST00000615798 PSG7Q13046 419 aa7.4□□□□□ -1.22
COL12A1-211ENST00000615798 C11orf52Q96A22 123 aa7.4□□□□□ -1.22
COL12A1-211ENST00000615798 WI2-2373I1.2A0A1W2PRP0 233 aa7.4□□□□□ -1.23
COL12A1-211ENST00000615798 SRRM5B3KS81 715 aa7.4□□□□□ -1.23
COL12A1-211ENST00000615798 TFF2Q03403 129 aa7.4□□□□□ -1.23
COL12A1-211ENST00000615798 SNURFQ9Y675 71 aa7.4□□□□□ -1.23
COL12A1-211ENST00000615798 IGHV3-53P01767 116 aa7.4□□□□□ -1.23
COL12A1-211ENST00000615798 RNASE13Q5GAN3 156 aaKnown RBP7.4□□□□□ -1.23
COL12A1-211ENST00000615798 K7ENP7 123 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 COLCA1Q6ZS62 124 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 V9GYV3 84 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 SDHAF1A6NFY7 115 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 ZNF747Q9BV97 191 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 TMEM200BQ69YZ2 307 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 IGHV4-4A0A075B6R2 117 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 MST1LQ2TV78 715 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 CLEC2BQ92478 149 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 IGHV3-11P01762 117 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 FAM201AQ5SY85 155 aa7.39□□□□□ -1.23
COL12A1-211ENST00000615798 IGKV1D-13A0A0B4J2D9 117 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 IGKV1-13P0DP09 117 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 GGNQ86UU5 652 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 LTAP01374 205 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 C15orf32Q32M92 178 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 CDPF1Q6NVV7 123 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 FAM216BQ8N7L0 139 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 DEFB124Q8NES8 71 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 TMEM178BH3BS89 294 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 ENHOQ6UWT2 76 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 IGKV1-5P01602 117 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 PLA2G2AP14555 144 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 CCL19Q99731 98 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 SPAARA0A1B0GVQ0 90 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 EPOPA6NHQ4 379 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 RBX1P62877 108 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 H0YJW9 148 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 SPAG11BQ08648 103 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 OOSP1A8MZH6 123 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 RFPL3SP0C7P2 107 aa7.38□□□□□ -1.23
COL12A1-211ENST00000615798 C2CD3Q4AC94 2353 aa7.37□□□□□ -1.23
COL12A1-211ENST00000615798 NEU4Q8WWR8 484 aaPredicted RBP7.37□□□□□ -1.23
COL12A1-211ENST00000615798 SHANK2-AS3Q9BTD1 123 aa7.37□□□□□ -1.23
COL12A1-211ENST00000615798 MSRB2Q9Y3D2 182 aa7.37□□□□□ -1.23
COL12A1-211ENST00000615798 ZNF503Q96F45 646 aa7.37□□□□□ -1.23
COL12A1-211ENST00000615798 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
COL12A1-211ENST00000615798 USMG5Q96IX5 58 aa7.37□□□□□ -1.23
COL12A1-211ENST00000615798 EFNA4P52798 201 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 SONP18583 2426 aaKnown RBP7.36□□□□□ -1.23
COL12A1-211ENST00000615798 LECT2O14960 151 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 CRYGDP07320 174 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 MIFP14174 115 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 CGB7P0DN87 165 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 COX6B1P14854 86 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 WFDC10AQ9H1F0 79 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 TEX49A0A1B0GTD5 131 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 CCL3L1P16619 93 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 Q8N9L7 120 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 TRAV7A0A075B6U4 112 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 LMO1P25800 156 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 IGHV1-18A0A0C4DH31 117 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 IGLV3-1P01715 115 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 NTF4P34130 210 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 CSRP2Q16527 193 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 APRG1Q8IVJ8 170 aa7.36□□□□□ -1.23
COL12A1-211ENST00000615798 PATE3B3GLJ2 98 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 C1orf147Q96MC9 270 aaPredicted RBP7.35□□□□□ -1.23
COL12A1-211ENST00000615798 PRSS22Q9GZN4 317 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 STPG1Q5TH74 334 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 Q6ZSR3 168 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 FGFBP3Q8TAT2 258 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 DIRC1Q969H9 104 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 DIAPH2-AS1Q14236 149 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 ACANP16112 2415 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 EFNA2O43921 213 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 ZNF524Q96C55 264 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 CGB3P0DN86 165 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 ZNF134P52741 427 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 Q6Q795 121 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 IGKV1-12A0A0C4DH73 117 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 IGKV1D-12P01611 117 aa7.35□□□□□ -1.23
COL12A1-211ENST00000615798 IGHV1-69DA0A0B4J2H0 117 aa7.34□□□□□ -1.23
COL12A1-211ENST00000615798 C15orf62A8K5M9 175 aa7.34□□□□□ -1.23
COL12A1-211ENST00000615798 IGHV1-2P23083 117 aa7.34□□□□□ -1.23
COL12A1-211ENST00000615798 C17orf100A8MU93 164 aa7.34□□□□□ -1.23
COL12A1-211ENST00000615798 A0A1W2PRX2 142 aa7.34□□□□□ -1.23
COL12A1-211ENST00000615798 TIRAPP58753 221 aa7.34□□□□□ -1.23
COL12A1-211ENST00000615798 TMEM254Q8TBM7 123 aa7.34□□□□□ -1.23
COL12A1-211ENST00000615798 RIF1Q5UIP0 2472 aaKnown RBP7.34□□□□□ -1.23
COL12A1-211ENST00000615798 FAM223BA6NKX1 122 aa7.34□□□□□ -1.23
COL12A1-211ENST00000615798 J3QLI3 93 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms