RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 UNQ9165/PRO28630Q6UXU0 137 aa9.63□□□□□ -0.87
MSH6-213ENST00000614496 RBAKDNA6NC62 111 aa9.62□□□□□ -0.87
MSH6-213ENST00000614496 TMEM238C9JI98 176 aa9.62□□□□□ -0.87
MSH6-213ENST00000614496 AZU1P20160 251 aa9.62□□□□□ -0.87
MSH6-213ENST00000614496 C1orf122Q6ZSJ8 110 aa9.62□□□□□ -0.87
MSH6-213ENST00000614496 FAM223BA6NKX1 122 aa9.62□□□□□ -0.87
MSH6-213ENST00000614496 FAM223AQ8IWN6 122 aa9.62□□□□□ -0.87
MSH6-213ENST00000614496 ZNF48Q96MX3 618 aaPredicted RBP9.62□□□□□ -0.87
MSH6-213ENST00000614496 VCX2Q9H322 139 aa9.62□□□□□ -0.87
MSH6-213ENST00000614496 KLK9Q9UKQ9 250 aa9.62□□□□□ -0.87
MSH6-213ENST00000614496 NPC2P61916 151 aa9.62□□□□□ -0.87
MSH6-213ENST00000614496 DLX4Q92988 240 aaPredicted RBP9.62□□□□□ -0.87
MSH6-213ENST00000614496 USP9YO00507 2555 aaPredicted RBP9.61□□□□□ -0.87
MSH6-213ENST00000614496 VCYO14598 125 aa9.61□□□□□ -0.87
MSH6-213ENST00000614496 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
MSH6-213ENST00000614496 A0A1B0GV72 72 aa9.61□□□□□ -0.87
MSH6-213ENST00000614496 F8W735 103 aaPredicted RBP9.61□□□□□ -0.87
MSH6-213ENST00000614496 G3V4G9 280 aa9.61□□□□□ -0.87
MSH6-213ENST00000614496 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
MSH6-213ENST00000614496 PAPPA-AS1Q5QFB9 102 aa9.61□□□□□ -0.87
MSH6-213ENST00000614496 SDHAF1A6NFY7 115 aa9.61□□□□□ -0.87
MSH6-213ENST00000614496 IGHV4-39P01824 125 aa9.61□□□□□ -0.87
MSH6-213ENST00000614496 GNLYP22749 145 aa9.61□□□□□ -0.87
MSH6-213ENST00000614496 GAGE12HA6NDE8 117 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 BLCAPP62952 87 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 SPINK13Q1W4C9 94 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 JPT2Q9H910 190 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 AGRNO00468 2067 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 IGHV1-69DA0A0B4J2H0 117 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 IGHV1-69P01742 117 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 C16orf54Q6UWD8 224 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 DAZ1Q9NQZ3 744 aaKnown RBP9.6□□□□□ -0.87
MSH6-213ENST00000614496 F8W1H4 67 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 RRN3P1Q2M238 152 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 SIRPDQ9H106 197 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 HIGD1BQ9P298 99 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 TMEM95Q3KNT9 176 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 FOXI2Q6ZQN5 318 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
MSH6-213ENST00000614496 A0A0U1RRA0 63 aa9.59□□□□□ -0.87
MSH6-213ENST00000614496 TNFRSF18Q9Y5U5 241 aa9.59□□□□□ -0.87
MSH6-213ENST00000614496 KNCNA6PVL3 124 aa9.59□□□□□ -0.87
MSH6-213ENST00000614496 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
MSH6-213ENST00000614496 C5orf56Q8N8D9 126 aa9.59□□□□□ -0.87
MSH6-213ENST00000614496 DYNLRB2Q8TF09 96 aa9.59□□□□□ -0.87
MSH6-213ENST00000614496 A8MWV9 139 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 NDUFA4O00483 81 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 C9orf47Q6ZRZ4 202 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 TLN2Q9Y4G6 2542 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 MAPK1IP1LQ8NDC0 245 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 DUX3Q96PT4 197 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
MSH6-213ENST00000614496 TRAV8-2A0A0B4J237 113 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 CD28P10747 220 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 PMVKQ15126 192 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 C20orf78Q9BR46 151 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 SPXQ9BT56 116 aa9.58□□□□□ -0.88
MSH6-213ENST00000614496 SYNJ2BPP57105 145 aa9.57□□□□□ -0.88
MSH6-213ENST00000614496 GATD1Q8NB37 220 aa9.57□□□□□ -0.88
MSH6-213ENST00000614496 C20orf173Q96LM9 149 aa9.57□□□□□ -0.88
MSH6-213ENST00000614496 IGHV4-38-2P0DP08 117 aa9.57□□□□□ -0.88
MSH6-213ENST00000614496 TAL2Q16559 108 aa9.57□□□□□ -0.88
MSH6-213ENST00000614496 PRR9Q5T870 116 aa9.57□□□□□ -0.88
MSH6-213ENST00000614496 BAALCQ8WXS3 180 aa9.57□□□□□ -0.88
MSH6-213ENST00000614496 ADARB2-AS1A8MUL3 147 aa9.56□□□□□ -0.88
MSH6-213ENST00000614496 USP9XQ93008 2570 aaPredicted RBP9.56□□□□□ -0.88
MSH6-213ENST00000614496 SETD2Q9BYW2 2564 aaPredicted RBP9.56□□□□□ -0.88
MSH6-213ENST00000614496 MRPL53Q96EL3 112 aaKnown RBP9.56□□□□□ -0.88
MSH6-213ENST00000614496 ERG28Q9UKR5 140 aa9.56□□□□□ -0.88
MSH6-213ENST00000614496 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
MSH6-213ENST00000614496 ADGRG4Q8IZF6 3080 aa9.56□□□□□ -0.88
MSH6-213ENST00000614496 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
MSH6-213ENST00000614496 RASL10AQ92737 203 aa9.56□□□□□ -0.88
MSH6-213ENST00000614496 IGHV7-4-1A0A0J9YVY3 117 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 IGHV4-61A0A0C4DH41 118 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 C9JAW5 83 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 IGHG4P01861 327 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 COX6CP09669 75 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 CKS1BP61024 79 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 LGALS1P09382 135 aaKnown RBP9.55□□□□□ -0.88
MSH6-213ENST00000614496 NBL1P41271 181 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 FBXL19-AS1Q494R0 122 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 Q8N6K4 173 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 NRACQ8N912 160 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 ITLN2Q8WWU7 325 aaPredicted RBP9.55□□□□□ -0.88
MSH6-213ENST00000614496 AJUBAQ96IF1 538 aa9.55□□□□□ -0.88
MSH6-213ENST00000614496 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
MSH6-213ENST00000614496 SPINK8P0C7L1 97 aa9.54□□□□□ -0.88
MSH6-213ENST00000614496 SRSF2Q01130 221 aaKnown RBP9.54□□□□□ -0.88
MSH6-213ENST00000614496 UFSP1Q6NVU6 142 aa9.54□□□□□ -0.88
MSH6-213ENST00000614496 PTH2Q96A98 100 aa9.54□□□□□ -0.88
MSH6-213ENST00000614496 IGKV3OR2-268A0A0C4DH90 116 aa9.54□□□□□ -0.88
MSH6-213ENST00000614496 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
MSH6-213ENST00000614496 EBI3Q14213 229 aa9.54□□□□□ -0.88
MSH6-213ENST00000614496 SUMO4Q6EEV6 95 aa9.54□□□□□ -0.88
MSH6-213ENST00000614496 OPRPNQ99935 248 aaPredicted RBP9.54□□□□□ -0.88
MSH6-213ENST00000614496 LENEPQ9Y5L5 61 aa9.54□□□□□ -0.88
MSH6-213ENST00000614496 CLPSL1A2RUU4 121 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms