RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 M0R2P5 195 aa12.42□□□□□ -0.42
MUC1-224ENST00000611577 ZNF674Q2M3X9 581 aa12.42□□□□□ -0.42
MUC1-224ENST00000611577 ZNF575Q86XF7 245 aa12.42□□□□□ -0.42
MUC1-224ENST00000611577 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
MUC1-224ENST00000611577 IGKV3D-20A0A0C4DH25 116 aa12.41□□□□□ -0.42
MUC1-224ENST00000611577 CRIP1P50238 77 aa12.41□□□□□ -0.42
MUC1-224ENST00000611577 DAZAP1Q96EP5 407 aaKnown RBP12.41□□□□□ -0.42
MUC1-224ENST00000611577 FAM210AQ96ND0 272 aa12.41□□□□□ -0.42
MUC1-224ENST00000611577 KRTAP4-5Q9BYR2 181 aa12.41□□□□□ -0.42
MUC1-224ENST00000611577 LRP1BQ9NZR2 4599 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 TMSB15BA0A087X1C1 80 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 C9JCJ5 164 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 TMEM250H0YL14 139 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 IGHV3-53P01767 116 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 RAB14P61106 215 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 TMEM88Q6PEY1 159 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 SMIM12Q96EX1 92 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 MLST8Q9BVC4 326 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 BIN3Q9NQY0 253 aa12.4□□□□□ -0.42
MUC1-224ENST00000611577 GRIFINA4D1Z8 144 aa12.39□□□□□ -0.43
MUC1-224ENST00000611577 KRBOX1C9JBD0 128 aa12.39□□□□□ -0.43
MUC1-224ENST00000611577 SOHLH1Q5JUK2 328 aa12.39□□□□□ -0.43
MUC1-224ENST00000611577 Q6ZR54 194 aa12.39□□□□□ -0.43
MUC1-224ENST00000611577 PARLQ9H300 379 aa12.39□□□□□ -0.43
MUC1-224ENST00000611577 LINC01559Q495D7 138 aa12.38□□□□□ -0.43
MUC1-224ENST00000611577 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
MUC1-224ENST00000611577 RASL10AQ92737 203 aa12.38□□□□□ -0.43
MUC1-224ENST00000611577 C18orf15Q96N68 181 aa12.38□□□□□ -0.43
MUC1-224ENST00000611577 H3BVH4 76 aa12.37□□□□□ -0.43
MUC1-224ENST00000611577 C15orf53Q8NAA6 179 aa12.37□□□□□ -0.43
MUC1-224ENST00000611577 OR4C5Q8NGB2 326 aa12.37□□□□□ -0.43
MUC1-224ENST00000611577 C9orf85Q96MD7 179 aa12.37□□□□□ -0.43
MUC1-224ENST00000611577 TRGV4A0A0C4DH28 118 aa12.36□□□□□ -0.43
MUC1-224ENST00000611577 PGPEP1LA6NFU8 196 aa12.36□□□□□ -0.43
MUC1-224ENST00000611577 NUDT3O95989 172 aa12.36□□□□□ -0.43
MUC1-224ENST00000611577 RNASE3P12724 160 aaKnown RBP12.36□□□□□ -0.43
MUC1-224ENST00000611577 IL36BQ9NZH7 164 aa12.36□□□□□ -0.43
MUC1-224ENST00000611577 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
MUC1-224ENST00000611577 A0A0J9YY99 117 aa12.35□□□□□ -0.43
MUC1-224ENST00000611577 SFTA3P0C7M3 94 aa12.35□□□□□ -0.43
MUC1-224ENST00000611577 ARMS2P0C7Q2 107 aa12.35□□□□□ -0.43
MUC1-224ENST00000611577 HOXA5P20719 270 aa12.35□□□□□ -0.43
MUC1-224ENST00000611577 RPL19P84098 196 aaKnown RBP12.35□□□□□ -0.43
MUC1-224ENST00000611577 PEA15Q15121 130 aa12.35□□□□□ -0.43
MUC1-224ENST00000611577 SYT8Q8NBV8 401 aa12.35□□□□□ -0.43
MUC1-224ENST00000611577 PHLDA3Q9Y5J5 127 aa12.35□□□□□ -0.43
MUC1-224ENST00000611577 TRBV20OR9-2A0A075B6H5 130 aa12.34□□□□□ -0.43
MUC1-224ENST00000611577 TRAV4A0A0B4J268 109 aa12.34□□□□□ -0.43
MUC1-224ENST00000611577 IGLV2-8P01709 118 aa12.34□□□□□ -0.43
MUC1-224ENST00000611577 P01737 135 aa12.34□□□□□ -0.43
MUC1-224ENST00000611577 C1orf134Q5TEV5 83 aa12.34□□□□□ -0.43
MUC1-224ENST00000611577 SMIM7Q9BQ49 75 aa12.34□□□□□ -0.43
MUC1-224ENST00000611577 ZNF727A8MUV8 499 aa12.33□□□□□ -0.44
MUC1-224ENST00000611577 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
MUC1-224ENST00000611577 SLAQ13239 276 aa12.33□□□□□ -0.44
MUC1-224ENST00000611577 RNF212Q495C1 297 aa12.33□□□□□ -0.44
MUC1-224ENST00000611577 DNLZQ5SXM8 178 aa12.33□□□□□ -0.44
MUC1-224ENST00000611577 OR2D3Q8NGH3 330 aa12.33□□□□□ -0.44
MUC1-224ENST00000611577 ZNF479Q96JC4 524 aa12.33□□□□□ -0.44
MUC1-224ENST00000611577 XKRY2A2RUG3 117 aa12.32□□□□□ -0.44
MUC1-224ENST00000611577 SRP19P09132 144 aaKnown RBP12.32□□□□□ -0.44
MUC1-224ENST00000611577 RPS20P60866 119 aaKnown RBP12.32□□□□□ -0.44
MUC1-224ENST00000611577 OCC1Q8TAD7 63 aa12.32□□□□□ -0.44
MUC1-224ENST00000611577 PRO0255Q9UI72 69 aa12.32□□□□□ -0.44
MUC1-224ENST00000611577 APOBP04114 4563 aaKnown RBP12.32□□□□□ -0.44
MUC1-224ENST00000611577 DNAH5Q8TE73 4624 aa12.31□□□□□ -0.44
MUC1-224ENST00000611577 M0R381 172 aa12.31□□□□□ -0.44
MUC1-224ENST00000611577 PAX4O43316 350 aa12.31□□□□□ -0.44
MUC1-224ENST00000611577 CXCL1P09341 107 aa12.31□□□□□ -0.44
MUC1-224ENST00000611577 ZFP82Q8N141 532 aa12.31□□□□□ -0.44
MUC1-224ENST00000611577 PTH2Q96A98 100 aa12.31□□□□□ -0.44
MUC1-224ENST00000611577 HHLA3Q9XRX5 114 aa12.31□□□□□ -0.44
MUC1-224ENST00000611577 NACAE9PAV3 2078 aa12.3□□□□□ -0.44
MUC1-224ENST00000611577 C19orf71A6NCJ1 209 aa12.3□□□□□ -0.44
MUC1-224ENST00000611577 A8MWV9 139 aa12.3□□□□□ -0.44
MUC1-224ENST00000611577 FHL2Q14192 279 aa12.3□□□□□ -0.44
MUC1-224ENST00000611577 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
MUC1-224ENST00000611577 IGHV3-73A0A0B4J1V6 119 aa12.29□□□□□ -0.44
MUC1-224ENST00000611577 C16orf90A8MZG2 172 aa12.29□□□□□ -0.44
MUC1-224ENST00000611577 H3BNG1 76 aa12.29□□□□□ -0.44
MUC1-224ENST00000611577 RS1O15537 224 aa12.29□□□□□ -0.44
MUC1-224ENST00000611577 CIDEAO60543 219 aa12.29□□□□□ -0.44
MUC1-224ENST00000611577 SMDT1Q9H4I9 107 aa12.29□□□□□ -0.44
MUC1-224ENST00000611577 K7EN84 100 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 FAM74A3Q4VXF1 159 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 PIK3CD-AS1Q5SR53 167 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 SPANXN1Q5VSR9 72 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 CFAP126Q5VTH2 177 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 NUDT10Q8NFP7 164 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 NUDT11Q96G61 164 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 RNASE7Q9H1E1 156 aaKnown RBP12.28□□□□□ -0.44
MUC1-224ENST00000611577 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 LY96Q9Y6Y9 160 aa12.28□□□□□ -0.44
MUC1-224ENST00000611577 GZMBP10144 247 aa12.27□□□□□ -0.45
MUC1-224ENST00000611577 CRYBA4P53673 196 aa12.27□□□□□ -0.45
MUC1-224ENST00000611577 SSTP61278 116 aa12.27□□□□□ -0.45
MUC1-224ENST00000611577 SRSF3P84103 164 aaKnown RBP12.27□□□□□ -0.45
MUC1-224ENST00000611577 MAPKAPK5-AS1Q8N8E1 139 aa12.27□□□□□ -0.45
MUC1-224ENST00000611577 FER1L6-AS1Q8NA97 138 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms