RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 LRP1BQ9NZR2 4599 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 A0A1B0GV50 99 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 A0A1W2PPV4 95 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 IGLV2-11P01706 119 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 TYMSP04818 313 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 BCL2P10415 239 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 CDC34P49427 236 aaPredicted RBP7.29□□□□□ -1.24
VRK3-214ENST00000598553 ZNF726P1Q15940 193 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 Q6ZRN7 208 aaPredicted RBP7.29□□□□□ -1.24
VRK3-214ENST00000598553 CMTM2Q8TAZ6 248 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 HIST1H2BAQ96A08 127 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 VAX2Q9UIW0 290 aa7.29□□□□□ -1.24
VRK3-214ENST00000598553 IGHV3-16A0A0C4DH30 117 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 CTXND1A0A1B0GTU2 59 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 A0A1W2PPQ1 181 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 MAP1LC3B2A6NCE7 125 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 GGTLC3B5MD39 225 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 PAX4O43316 350 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 STAG3L2P0CL84 134 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 STAG3L3P0CL85 134 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 RAB5AP20339 215 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 GCHFRP30047 84 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 LINC00315P59091 139 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 ARL6IP6Q8N6S5 226 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 RAB24Q969Q5 203 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 ACTR3CQ9C0K3 210 aaPredicted RBP7.28□□□□□ -1.24
VRK3-214ENST00000598553 MAP1LC3BQ9GZQ8 125 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 MANBALQ9NQG1 85 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 GNG13Q9P2W3 67 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 ICOSQ9Y6W8 199 aa7.28□□□□□ -1.24
VRK3-214ENST00000598553 TRGV11A0A075B6L2 103 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 C16orf90A8MZG2 172 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 NXPH4O95158 308 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 S100A6P06703 90 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 TDRG1Q3Y452 100 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 FAM159AQ6UWV7 190 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 SPATA12Q7Z6I5 190 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 WFDC10BQ8IUB3 73 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 CYB561D1Q8N8Q1 229 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 TMEM242Q9NWH2 141 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 PRO0255Q9UI72 69 aa7.27□□□□□ -1.25
VRK3-214ENST00000598553 K7EQD1 137 aa7.26□□□□□ -1.25
VRK3-214ENST00000598553 TCRAP04437 139 aa7.26□□□□□ -1.25
VRK3-214ENST00000598553 SLAQ13239 276 aa7.26□□□□□ -1.25
VRK3-214ENST00000598553 LYPD5Q6UWN5 251 aa7.26□□□□□ -1.25
VRK3-214ENST00000598553 RASL10AQ92737 203 aa7.26□□□□□ -1.25
VRK3-214ENST00000598553 LINC00479Q96M42 142 aa7.26□□□□□ -1.25
VRK3-214ENST00000598553 SPXQ9BT56 116 aa7.26□□□□□ -1.25
VRK3-214ENST00000598553 CTDSP1Q9GZU7 261 aa7.26□□□□□ -1.25
VRK3-214ENST00000598553 HHLA3Q9XRX5 114 aa7.26□□□□□ -1.25
VRK3-214ENST00000598553 APOBP04114 4563 aaKnown RBP7.25□□□□□ -1.25
VRK3-214ENST00000598553 TRAV21A0A0B4J279 112 aa7.25□□□□□ -1.25
VRK3-214ENST00000598553 TMEM250H0YL14 139 aa7.25□□□□□ -1.25
VRK3-214ENST00000598553 S100A8P05109 93 aa7.25□□□□□ -1.25
VRK3-214ENST00000598553 GYPEP15421 78 aa7.25□□□□□ -1.25
VRK3-214ENST00000598553 BTF3P20290 206 aaKnown RBP7.25□□□□□ -1.25
VRK3-214ENST00000598553 AKR1C3P42330 323 aa7.25□□□□□ -1.25
VRK3-214ENST00000598553 CEBPGP53567 150 aa7.25□□□□□ -1.25
VRK3-214ENST00000598553 LINC00518Q8N0U6 118 aa7.25□□□□□ -1.25
VRK3-214ENST00000598553 TXNDC17Q9BRA2 123 aa7.25□□□□□ -1.25
VRK3-214ENST00000598553 TCEAL7Q9BRU2 100 aa7.25□□□□□ -1.25
VRK3-214ENST00000598553 DNAH5Q8TE73 4624 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 TRAV34A0A0B4J273 112 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 TRGV4A0A0C4DH28 118 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 SERTM2A0A1B0GWG4 89 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 SIVA1O15304 175 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 DNAH10OSP0CZ25 163 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 FGF8P55075 233 aaPredicted RBP7.24□□□□□ -1.25
VRK3-214ENST00000598553 SUMO1P63165 101 aaKnown RBP7.24□□□□□ -1.25
VRK3-214ENST00000598553 MEF2BQ02080 365 aaPredicted RBP7.24□□□□□ -1.25
VRK3-214ENST00000598553 MRPL23Q16540 153 aaKnown RBP7.24□□□□□ -1.25
VRK3-214ENST00000598553 IQCF2Q8IXL9 164 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 C5orf17Q8NAS9 161 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 NAT8Q9UHE5 227 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 PSG8Q9UQ74 426 aa7.24□□□□□ -1.25
VRK3-214ENST00000598553 ABCA13Q86UQ4 5058 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 M0R2P5 195 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 AKR1D1P51857 326 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 UBE2G2P60604 165 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 NEGR1Q7Z3B1 354 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 PRNTQ86SH4 94 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 ISOC2Q96AB3 205 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 C9orf85Q96MD7 179 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 NDFIP1Q9BT67 221 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 SDF2L1Q9HCN8 221 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 TMEM167BQ9NRX6 74 aa7.23□□□□□ -1.25
VRK3-214ENST00000598553 IGHV3-73A0A0B4J1V6 119 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 IGKV3D-20A0A0C4DH25 116 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 PGPEP1LA6NFU8 196 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 C5orf52A6NGY3 159 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 ZNF727A8MUV8 499 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 C9JCJ5 164 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 K7EQM0 130 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 PDE6DO43924 150 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 CXorf1O96002 111 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 GCGP01275 180 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 ORM1P02763 201 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 S100A9P06702 114 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms