RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 LCE6AA0A183 80 aa14.26□□□□□ -0.13
PNKP-211ENST00000598020 H3BVH4 76 aa14.26□□□□□ -0.13
PNKP-211ENST00000598020 ARMS2P0C7Q2 107 aa14.26□□□□□ -0.13
PNKP-211ENST00000598020 POM121L12Q8N7R1 296 aa14.26□□□□□ -0.13
PNKP-211ENST00000598020 SMIM7Q9BQ49 75 aa14.26□□□□□ -0.13
PNKP-211ENST00000598020 C9JQL5 133 aa14.25□□□□□ -0.13
PNKP-211ENST00000598020 H3BNG1 76 aa14.25□□□□□ -0.13
PNKP-211ENST00000598020 K7EN84 100 aa14.25□□□□□ -0.13
PNKP-211ENST00000598020 CEBPGP53567 150 aa14.25□□□□□ -0.13
PNKP-211ENST00000598020 RPL19P84098 196 aaKnown RBP14.25□□□□□ -0.13
PNKP-211ENST00000598020 SRSF3P84103 164 aaKnown RBP14.25□□□□□ -0.13
PNKP-211ENST00000598020 C15orf53Q8NAA6 179 aa14.25□□□□□ -0.13
PNKP-211ENST00000598020 KMT2CQ8NEZ4 4911 aaKnown RBP14.24□□□□□ -0.13
PNKP-211ENST00000598020 ZNF727A8MUV8 499 aa14.24□□□□□ -0.13
PNKP-211ENST00000598020 CIDEAO60543 219 aa14.24□□□□□ -0.13
PNKP-211ENST00000598020 RPS20P60866 119 aaKnown RBP14.24□□□□□ -0.13
PNKP-211ENST00000598020 SLAQ13239 276 aa14.24□□□□□ -0.13
PNKP-211ENST00000598020 FHL2Q14192 279 aa14.24□□□□□ -0.13
PNKP-211ENST00000598020 FAM74A3Q4VXF1 159 aa14.24□□□□□ -0.13
PNKP-211ENST00000598020 SSBP4Q9BWG4 385 aaPredicted RBP14.24□□□□□ -0.13
PNKP-211ENST00000598020 NACAE9PAV3 2078 aa14.24□□□□□ -0.13
PNKP-211ENST00000598020 RS1O15537 224 aa14.23□□□□□ -0.13
PNKP-211ENST00000598020 P01737 135 aa14.23□□□□□ -0.13
PNKP-211ENST00000598020 LGALS9CQ6DKI2 356 aa14.23□□□□□ -0.13
PNKP-211ENST00000598020 NUDT10Q8NFP7 164 aa14.23□□□□□ -0.13
PNKP-211ENST00000598020 OR4C5Q8NGB2 326 aa14.23□□□□□ -0.13
PNKP-211ENST00000598020 LINC00476Q8WZB0 136 aa14.23□□□□□ -0.13
PNKP-211ENST00000598020 NUDT11Q96G61 164 aa14.23□□□□□ -0.13
PNKP-211ENST00000598020 ZNF479Q96JC4 524 aa14.23□□□□□ -0.13
PNKP-211ENST00000598020 TRAV26-1A0A087WT03 109 aa14.22□□□□□ -0.13
PNKP-211ENST00000598020 SNAI2O43623 268 aa14.22□□□□□ -0.13
PNKP-211ENST00000598020 IGHV3-53P01767 116 aa14.22□□□□□ -0.13
PNKP-211ENST00000598020 OR5AL1P0C617 328 aa14.22□□□□□ -0.13
PNKP-211ENST00000598020 OR2D3Q8NGH3 330 aa14.22□□□□□ -0.13
PNKP-211ENST00000598020 PHLDA3Q9Y5J5 127 aa14.22□□□□□ -0.13
PNKP-211ENST00000598020 SFTA3P0C7M3 94 aa14.21□□□□□ -0.13
PNKP-211ENST00000598020 CFAP126Q5VTH2 177 aa14.21□□□□□ -0.13
PNKP-211ENST00000598020 DMRTA1Q5VZB9 504 aa14.21□□□□□ -0.13
PNKP-211ENST00000598020 FAM231DQ6ZW35 169 aa14.21□□□□□ -0.13
PNKP-211ENST00000598020 LINC01551Q86U37 167 aa14.21□□□□□ -0.13
PNKP-211ENST00000598020 SYT8Q8NBV8 401 aa14.21□□□□□ -0.13
PNKP-211ENST00000598020 VSIG2Q96IQ7 327 aa14.21□□□□□ -0.13
PNKP-211ENST00000598020 PRO0255Q9UI72 69 aa14.21□□□□□ -0.13
PNKP-211ENST00000598020 XKRY2A2RUG3 117 aa14.2□□□□□ -0.14
PNKP-211ENST00000598020 A8MWV9 139 aa14.2□□□□□ -0.14
PNKP-211ENST00000598020 TRGV4A0A0C4DH28 118 aa14.19□□□□□ -0.14
PNKP-211ENST00000598020 NXPH4O95158 308 aa14.19□□□□□ -0.14
PNKP-211ENST00000598020 IGLC6P0CF74 106 aa14.19□□□□□ -0.14
PNKP-211ENST00000598020 CRYBA4P53673 196 aa14.19□□□□□ -0.14
PNKP-211ENST00000598020 TMEM241Q24JQ0 296 aa14.19□□□□□ -0.14
PNKP-211ENST00000598020 ZFP82Q8N141 532 aa14.19□□□□□ -0.14
PNKP-211ENST00000598020 RNASE7Q9H1E1 156 aaKnown RBP14.19□□□□□ -0.14
PNKP-211ENST00000598020 HHLA3Q9XRX5 114 aa14.19□□□□□ -0.14
PNKP-211ENST00000598020 A0A0J9YY99 117 aa14.18□□□□□ -0.14
PNKP-211ENST00000598020 ZFP2Q6ZN57 461 aa14.18□□□□□ -0.14
PNKP-211ENST00000598020 RPP21Q9H633 154 aaKnown RBP14.18□□□□□ -0.14
PNKP-211ENST00000598020 ALMS1Q8TCU4 4167 aa14.18□□□□□ -0.14
PNKP-211ENST00000598020 LYSTQ99698 3801 aa14.17□□□□□ -0.14
PNKP-211ENST00000598020 PAX4O43316 350 aa14.17□□□□□ -0.14
PNKP-211ENST00000598020 P0DMU3 169 aa14.17□□□□□ -0.14
PNKP-211ENST00000598020 FAM231AP0DMU4 169 aa14.17□□□□□ -0.14
PNKP-211ENST00000598020 FAM231CP0DMU5 169 aa14.17□□□□□ -0.14
PNKP-211ENST00000598020 SOHLH1Q5JUK2 328 aa14.17□□□□□ -0.14
PNKP-211ENST00000598020 SFRP2Q96HF1 295 aa14.17□□□□□ -0.14
PNKP-211ENST00000598020 NAT8Q9UHE5 227 aa14.17□□□□□ -0.14
PNKP-211ENST00000598020 A0A1W2PPQ1 181 aa14.16□□□□□ -0.14
PNKP-211ENST00000598020 LY6G6CO95867 125 aa14.16□□□□□ -0.14
PNKP-211ENST00000598020 NUDT3O95989 172 aa14.16□□□□□ -0.14
PNKP-211ENST00000598020 GZMBP10144 247 aa14.16□□□□□ -0.14
PNKP-211ENST00000598020 GATA1P15976 413 aaPredicted RBP14.16□□□□□ -0.14
PNKP-211ENST00000598020 UFSP1Q6NVU6 142 aa14.16□□□□□ -0.14
PNKP-211ENST00000598020 FER1L6-AS1Q8NA97 138 aa14.16□□□□□ -0.14
PNKP-211ENST00000598020 OR10AG1Q8NH19 301 aa14.16□□□□□ -0.14
PNKP-211ENST00000598020 SACSQ9NZJ4 4579 aa14.15□□□□□ -0.14
PNKP-211ENST00000598020 DNAH1Q9P2D7 4330 aa14.15□□□□□ -0.14
PNKP-211ENST00000598020 F2Z2F3 143 aa14.15□□□□□ -0.14
PNKP-211ENST00000598020 M0R381 172 aa14.15□□□□□ -0.14
PNKP-211ENST00000598020 ERVFC1-1P60608 527 aa14.15□□□□□ -0.14
PNKP-211ENST00000598020 CT83Q5H943 113 aa14.15□□□□□ -0.14
PNKP-211ENST00000598020 JPT2Q9H910 190 aa14.15□□□□□ -0.14
PNKP-211ENST00000598020 OSTCQ9NRP0 149 aa14.15□□□□□ -0.14
PNKP-211ENST00000598020 GATCO43716 136 aaKnown RBP14.14□□□□□ -0.15
PNKP-211ENST00000598020 RPL23P62829 140 aaKnown RBP14.14□□□□□ -0.15
PNKP-211ENST00000598020 RNF212Q495C1 297 aa14.14□□□□□ -0.15
PNKP-211ENST00000598020 A0A096LPF7 62 aa14.13□□□□□ -0.15
PNKP-211ENST00000598020 TRBV6-4A0A1B0GX49 114 aa14.13□□□□□ -0.15
PNKP-211ENST00000598020 RHODO00212 210 aa14.13□□□□□ -0.15
PNKP-211ENST00000598020 CRYGDP07320 174 aa14.13□□□□□ -0.15
PNKP-211ENST00000598020 SPANXN1Q5VSR9 72 aa14.13□□□□□ -0.15
PNKP-211ENST00000598020 WDR73Q6P4I2 378 aa14.13□□□□□ -0.15
PNKP-211ENST00000598020 ISOC2Q96AB3 205 aa14.13□□□□□ -0.15
PNKP-211ENST00000598020 SAMD10Q9BYL1 202 aa14.13□□□□□ -0.15
PNKP-211ENST00000598020 CACNG7P62955 275 aa14.12□□□□□ -0.15
PNKP-211ENST00000598020 UQCC3Q6UW78 93 aa14.12□□□□□ -0.15
PNKP-211ENST00000598020 ICOSQ9Y6W8 199 aa14.12□□□□□ -0.15
PNKP-211ENST00000598020 IGHV3-73A0A0B4J1V6 119 aa14.11□□□□□ -0.15
PNKP-211ENST00000598020 A8MWL6 223 aa14.11□□□□□ -0.15
PNKP-211ENST00000598020 CTRLP40313 264 aa14.11□□□□□ -0.15
PNKP-211ENST00000598020 MRPL23Q16540 153 aaKnown RBP14.11□□□□□ -0.15
PNKP-211ENST00000598020 SLC25A29Q8N8R3 303 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms