RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 ZNF506Q5JVG8 444 aa10.11□□□□□ -0.79
VRK3-206ENST00000594090 DNLZQ5SXM8 178 aa10.11□□□□□ -0.79
VRK3-206ENST00000594090 PTH2Q96A98 100 aa10.11□□□□□ -0.79
VRK3-206ENST00000594090 IL36BQ9NZH7 164 aa10.11□□□□□ -0.79
VRK3-206ENST00000594090 LINC00588Q9Y4M8 146 aa10.11□□□□□ -0.79
VRK3-206ENST00000594090 PGPEP1LA6NFU8 196 aa10.1□□□□□ -0.79
VRK3-206ENST00000594090 H3BVH4 76 aa10.1□□□□□ -0.79
VRK3-206ENST00000594090 CENPWQ5EE01 88 aa10.1□□□□□ -0.79
VRK3-206ENST00000594090 IGLV2-18A0A075B6J9 118 aa10.09□□□□□ -0.79
VRK3-206ENST00000594090 TMSB15BA0A087X1C1 80 aa10.09□□□□□ -0.79
VRK3-206ENST00000594090 GRIFINA4D1Z8 144 aa10.09□□□□□ -0.79
VRK3-206ENST00000594090 RS1O15537 224 aa10.09□□□□□ -0.79
VRK3-206ENST00000594090 PRR27Q6MZM9 219 aa10.09□□□□□ -0.79
VRK3-206ENST00000594090 ZNF575Q86XF7 245 aa10.09□□□□□ -0.79
VRK3-206ENST00000594090 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
VRK3-206ENST00000594090 ICOSQ9Y6W8 199 aa10.09□□□□□ -0.79
VRK3-206ENST00000594090 M0R2N4 97 aa10.08□□□□□ -0.8
VRK3-206ENST00000594090 ARMS2P0C7Q2 107 aa10.08□□□□□ -0.8
VRK3-206ENST00000594090 ESRGQ1W209 222 aa10.08□□□□□ -0.8
VRK3-206ENST00000594090 PIK3CD-AS1Q5SR53 167 aa10.08□□□□□ -0.8
VRK3-206ENST00000594090 CFAP126Q5VTH2 177 aa10.08□□□□□ -0.8
VRK3-206ENST00000594090 MED9Q9NWA0 146 aa10.08□□□□□ -0.8
VRK3-206ENST00000594090 RAB19A4D1S5 217 aa10.07□□□□□ -0.8
VRK3-206ENST00000594090 GATA1P15976 413 aaPredicted RBP10.07□□□□□ -0.8
VRK3-206ENST00000594090 GNG4P50150 75 aa10.07□□□□□ -0.8
VRK3-206ENST00000594090 RPL19P84098 196 aaKnown RBP10.07□□□□□ -0.8
VRK3-206ENST00000594090 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
VRK3-206ENST00000594090 SMIM12Q96EX1 92 aa10.07□□□□□ -0.8
VRK3-206ENST00000594090 SCRT2Q9NQ03 307 aa10.07□□□□□ -0.8
VRK3-206ENST00000594090 TRBV20OR9-2A0A075B6H5 130 aa10.07□□□□□ -0.8
VRK3-206ENST00000594090 CIDEAO60543 219 aa10.07□□□□□ -0.8
VRK3-206ENST00000594090 IGLV2-8P01709 118 aa10.07□□□□□ -0.8
VRK3-206ENST00000594090 CXCL1P09341 107 aa10.07□□□□□ -0.8
VRK3-206ENST00000594090 MRPL23Q16540 153 aaKnown RBP10.07□□□□□ -0.8
VRK3-206ENST00000594090 RBFOX3A6NFN3 312 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 A8MWV9 139 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 K7EQD1 137 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 MED14OSP0DP75 135 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 MGST1P10620 155 aaKnown RBP10.06□□□□□ -0.8
VRK3-206ENST00000594090 GYPEP15421 78 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 DMRTA1Q5VZB9 504 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 Q6ZR54 194 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 SYT8Q8NBV8 401 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 PCNPQ8WW12 178 aaKnown RBP10.06□□□□□ -0.8
VRK3-206ENST00000594090 UPK3BQ9BT76 320 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 PARLQ9H300 379 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 MRPS16Q9Y3D3 137 aaKnown RBP10.06□□□□□ -0.8
VRK3-206ENST00000594090 PHLDA3Q9Y5J5 127 aa10.06□□□□□ -0.8
VRK3-206ENST00000594090 IGHV3-73A0A0B4J1V6 119 aa10.05□□□□□ -0.8
VRK3-206ENST00000594090 LOC100131303A0A0U1RQF7 123 aa10.04□□□□□ -0.8
VRK3-206ENST00000594090 SRIP30626 198 aa10.04□□□□□ -0.8
VRK3-206ENST00000594090 TOR2AQ5JU69 321 aa10.04□□□□□ -0.8
VRK3-206ENST00000594090 NEGR1Q7Z3B1 354 aa10.04□□□□□ -0.8
VRK3-206ENST00000594090 SLC25A29Q8N8R3 303 aa10.04□□□□□ -0.8
VRK3-206ENST00000594090 JPT2Q9H910 190 aa10.04□□□□□ -0.8
VRK3-206ENST00000594090 TRBV6-4A0A1B0GX49 114 aa10.03□□□□□ -0.8
VRK3-206ENST00000594090 TMEM250H0YL14 139 aa10.03□□□□□ -0.8
VRK3-206ENST00000594090 M0R381 172 aa10.03□□□□□ -0.8
VRK3-206ENST00000594090 RHOHQ15669 191 aa10.03□□□□□ -0.8
VRK3-206ENST00000594090 TEX261Q6UWH6 196 aa10.03□□□□□ -0.8
VRK3-206ENST00000594090 ZFP2Q6ZN57 461 aa10.03□□□□□ -0.8
VRK3-206ENST00000594090 ZFP82Q8N141 532 aa10.03□□□□□ -0.8
VRK3-206ENST00000594090 SAMD10Q9BYL1 202 aa10.03□□□□□ -0.8
VRK3-206ENST00000594090 Q9H8V8 135 aa10.03□□□□□ -0.8
VRK3-206ENST00000594090 NBDYA0A0U1RRE5 68 aa10.02□□□□□ -0.81
VRK3-206ENST00000594090 C19orf71A6NCJ1 209 aa10.02□□□□□ -0.81
VRK3-206ENST00000594090 SNAI2O43623 268 aa10.02□□□□□ -0.81
VRK3-206ENST00000594090 NXPH4O95158 308 aa10.02□□□□□ -0.81
VRK3-206ENST00000594090 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
VRK3-206ENST00000594090 LYPD5Q6UWN5 251 aa10.02□□□□□ -0.81
VRK3-206ENST00000594090 FAM210AQ96ND0 272 aa10.02□□□□□ -0.81
VRK3-206ENST00000594090 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.81
VRK3-206ENST00000594090 BIN3Q9NQY0 253 aa10.02□□□□□ -0.81
VRK3-206ENST00000594090 RHODO00212 210 aa10.01□□□□□ -0.81
VRK3-206ENST00000594090 OR5AL1P0C617 328 aa10.01□□□□□ -0.81
VRK3-206ENST00000594090 OR10AG1Q8NH19 301 aa10.01□□□□□ -0.81
VRK3-206ENST00000594090 DAZAP1Q96EP5 407 aaKnown RBP10.01□□□□□ -0.81
VRK3-206ENST00000594090 SFRP2Q96HF1 295 aa10.01□□□□□ -0.81
VRK3-206ENST00000594090 SSBP4Q9BWG4 385 aaPredicted RBP10.01□□□□□ -0.81
VRK3-206ENST00000594090 EIF5A2Q9GZV4 153 aaKnown RBP10.01□□□□□ -0.81
VRK3-206ENST00000594090 NDUFS6O75380 124 aaKnown RBP10□□□□□ -0.81
VRK3-206ENST00000594090 P01737 135 aa10□□□□□ -0.81
VRK3-206ENST00000594090 FAM74A4Q5TZK3 123 aa10□□□□□ -0.81
VRK3-206ENST00000594090 Q6ZSN1 163 aa10□□□□□ -0.81
VRK3-206ENST00000594090 SH2D6Q7Z4S9 175 aa10□□□□□ -0.81
VRK3-206ENST00000594090 OR2D3Q8NGH3 330 aa10□□□□□ -0.81
VRK3-206ENST00000594090 FRAS1Q86XX4 4008 aa10□□□□□ -0.81
VRK3-206ENST00000594090 A0A087WWL8 130 aa9.99□□□□□ -0.81
VRK3-206ENST00000594090 K7EN84 100 aa9.99□□□□□ -0.81
VRK3-206ENST00000594090 GZMBP10144 247 aa9.99□□□□□ -0.81
VRK3-206ENST00000594090 RPS20P60866 119 aaKnown RBP9.99□□□□□ -0.81
VRK3-206ENST00000594090 DNAH10Q8IVF4 4471 aa9.99□□□□□ -0.81
VRK3-206ENST00000594090 RTL8CO15255 209 aa9.99□□□□□ -0.81
VRK3-206ENST00000594090 CRYGDP07320 174 aa9.99□□□□□ -0.81
VRK3-206ENST00000594090 CEBPGP53567 150 aa9.99□□□□□ -0.81
VRK3-206ENST00000594090 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
VRK3-206ENST00000594090 OCC1Q8TAD7 63 aa9.99□□□□□ -0.81
VRK3-206ENST00000594090 MUC21A0A0G2JKD1 596 aa9.98□□□□□ -0.81
VRK3-206ENST00000594090 MUC21A0A140T8X8 626 aa9.98□□□□□ -0.81
VRK3-206ENST00000594090 SIVA1O15304 175 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms