RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 IGKV2D-40P01614 121 aaPredicted RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 IGHG4P01861 327 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 IGF1P05019 195 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 CD7P09564 240 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 RPL35AP18077 110 aaKnown RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 MT3P25713 68 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 CRYBB3P26998 211 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 DLK1P80370 383 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 ERCC8Q13216 396 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 VAMP3Q15836 100 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 ACOT6Q3I5F7 207 aaPredicted RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 DEFB121Q5J5C9 76 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 PSMG4Q5JS54 123 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 EIF5AL1Q6IS14 154 aaKnown RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 TCF24Q7RTU0 167 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM61Q8N0U2 210 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 PAXXQ9BUH6 204 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 A0A0G2JLM5 398 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 KNCNA6PVL3 124 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 DEFB4AO15263 64 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 SLC25A5P05141 298 aaKnown RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 EMP1P54849 157 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 RHOBP62745 196 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 FAM106AQ4KMX7 169 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 KCNIP4Q6PIL6 250 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 RBPMS2Q6ZRY4 209 aaKnown RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 GOLT1AQ6ZVE7 132 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 CYB561D1Q8N8Q1 229 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM75Q8N9X5 138 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 GNPNAT1Q96EK6 184 aaPredicted RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 MRAP2Q96G30 205 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 UBE2E2Q96LR5 201 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 METTL26Q96S19 204 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 TECRQ9NZ01 308 aaKnown RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 TIMM9Q9Y5J7 89 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 A0A087WWC5 75 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 C11orf94C9JXX5 98 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 M0R2Z0 102 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 CA1P00915 261 aaPredicted RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 PMCHP20382 165 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 RPS10P46783 165 aaKnown RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 TCL1AP56279 114 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H1AQ02539 215 aaPredicted RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 ACTL10Q5JWF8 245 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 C1orf194Q5T5A4 169 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 GDF5OSQ5U4N7 250 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 TVP23CQ96ET8 276 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 GTSF1LQ9H1H1 148 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 PSG8Q9UQ74 426 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 YTHDF2Q9Y5A9 579 aaKnown RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 TRBV9A0A0B4J1U6 114 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 PIGBOS1A0A0B4J2F0 54 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM213A2RRL7 107 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM89A2RUT3 159 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 LINC01619G3V211 115 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 OVOL1O14753 267 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 TAAR5O14804 337 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 CXCL1P09341 107 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 LGALS1P09382 135 aaKnown RBP2.41□□□□□ -2.02
ZNF540-207ENST00000589285 CBLN1P23435 193 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 SULT1A2P50226 295 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 DEFB131AP59861 70 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 KRTAP10-12P60413 245 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 ELOBQ15370 118 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 IQCJQ1A5X6 159 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 PRNTQ86SH4 94 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 NIT1Q86X76 327 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM183AQ8IXX5 376 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 OR1L4Q8NGR5 311 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 CMTM2Q8TAZ6 248 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 GINS3Q9BRX5 216 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 MCRIP2Q9BUT9 160 aaKnown RBP2.41□□□□□ -2.02
ZNF540-207ENST00000589285 G3V4G9 280 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 SEC11BP0C7V7 166 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 TRGC1P0CF51 173 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 C8orf88P0DMB2 117 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 GCHFRP30047 84 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 ADIRFQ15847 76 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM241Q24JQ0 296 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 COA6Q5JTJ3 125 aaKnown RBP2.41□□□□□ -2.02
ZNF540-207ENST00000589285 BPIFA4PQ86YQ2 179 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 OR4F17Q8NGA8 305 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 LINC00477Q96M19 166 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 SLC25A2Q9BXI2 301 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 DAZ1Q9NQZ3 744 aaKnown RBP2.41□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF586Q9NXT0 402 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 FUT9Q9Y231 359 aa2.41□□□□□ -2.02
ZNF540-207ENST00000589285 TRBV7-1A0A0A6YYK4 115 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 CTXND1A0A1B0GTU2 59 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 C2orf70A6NJV1 201 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF727A8MUV8 499 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 GGTLC3B5MD39 225 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 UMAD1C9J7I0 102 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 CLDN34H7C241 214 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 SPINK13Q1W4C9 94 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF343Q6P1L6 599 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 SIGLEC15Q6ZMC9 328 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 OR9G4Q8NGQ1 327 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 FRZBQ92765 325 aa2.4□□□□□ -2.02
ZNF540-207ENST00000589285 MIEN1Q9BRT3 115 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms