RNA–Protein interactions for RNA: ENST00000585466.1

CLIP3-202, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 2

Gene CLIP3, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-202ENST00000585466 LTAP01374 205 aa10.33□□□□□ -0.76
CLIP3-202ENST00000585466 ORM1P02763 201 aa10.33□□□□□ -0.76
CLIP3-202ENST00000585466 DNLZQ5SXM8 178 aa10.33□□□□□ -0.76
CLIP3-202ENST00000585466 SFT2D1Q8WV19 159 aa10.33□□□□□ -0.76
CLIP3-202ENST00000585466 FMC1Q96HJ9 113 aa10.33□□□□□ -0.76
CLIP3-202ENST00000585466 KRBOX1C9JBD0 128 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 SH2D1AO60880 128 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 BTF3P20290 206 aaKnown RBP10.32□□□□□ -0.76
CLIP3-202ENST00000585466 SRIP30626 198 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 LINC00315P59091 139 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 ZNF674Q2M3X9 581 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 LGALSLQ3ZCW2 172 aaPredicted RBP10.32□□□□□ -0.76
CLIP3-202ENST00000585466 CST9LP1Q5W188 147 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 UFSP1Q6NVU6 142 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 Q6ZNX1 250 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 WFDC10BQ8IUB3 73 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 TCTE3Q8IZS6 198 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 SLC25A29Q8N8R3 303 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 ZFP30Q9Y2G7 519 aa10.32□□□□□ -0.76
CLIP3-202ENST00000585466 A0A1B0GV50 99 aa10.31□□□□□ -0.76
CLIP3-202ENST00000585466 Q6ZSN1 163 aa10.31□□□□□ -0.76
CLIP3-202ENST00000585466 SCO2A0A1W2PP80 73 aa10.3□□□□□ -0.76
CLIP3-202ENST00000585466 MED14OSP0DP75 135 aa10.3□□□□□ -0.76
CLIP3-202ENST00000585466 TIRAPP58753 221 aa10.3□□□□□ -0.76
CLIP3-202ENST00000585466 CCL20P78556 96 aa10.3□□□□□ -0.76
CLIP3-202ENST00000585466 PIK3CD-AS1Q5SR53 167 aa10.3□□□□□ -0.76
CLIP3-202ENST00000585466 PCNPQ8WW12 178 aaKnown RBP10.3□□□□□ -0.76
CLIP3-202ENST00000585466 PARLQ9H300 379 aa10.3□□□□□ -0.76
CLIP3-202ENST00000585466 IL36BQ9NZH7 164 aa10.3□□□□□ -0.76
CLIP3-202ENST00000585466 IGHV3-73A0A0B4J1V6 119 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 TRBV6-4A0A1B0GX49 114 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 B4DEV8 164 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 CIDEAO60543 219 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 H2AFB1P0C5Y9 115 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 LINC00694P0DN24 101 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 TPT1P13693 172 aaKnown RBP10.29□□□□□ -0.76
CLIP3-202ENST00000585466 ASIPP42127 132 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 FAM162BQ5T6X4 162 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 TXNDC17Q9BRA2 123 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 MLST8Q9BVC4 326 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 JPT2Q9H910 190 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 SCRT2Q9NQ03 307 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 TNFRSF18Q9Y5U5 241 aa10.29□□□□□ -0.76
CLIP3-202ENST00000585466 TRAV1-1A0A0B4J248 108 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 H3BVH4 76 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 M0R036 132 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 PFDN1O60925 122 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 AKR1C3P42330 323 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 UBE2G1P62253 170 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 EIF5AP63241 154 aaKnown RBP10.28□□□□□ -0.76
CLIP3-202ENST00000585466 NHLRC2Q8NBF2 726 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 SAMD10Q9BYL1 202 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 Q9UF83 564 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 PCLOQ9Y6V0 5065 aa10.28□□□□□ -0.76
CLIP3-202ENST00000585466 KRTAP10-2P60368 255 aa10.27□□□□□ -0.77
CLIP3-202ENST00000585466 RHOHQ15669 191 aa10.27□□□□□ -0.77
CLIP3-202ENST00000585466 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.77
CLIP3-202ENST00000585466 ZFP2Q6ZN57 461 aa10.27□□□□□ -0.77
CLIP3-202ENST00000585466 GRIFINA4D1Z8 144 aa10.26□□□□□ -0.77
CLIP3-202ENST00000585466 C1QBP02746 253 aa10.26□□□□□ -0.77
CLIP3-202ENST00000585466 ARMS2P0C7Q2 107 aa10.26□□□□□ -0.77
CLIP3-202ENST00000585466 MGST1P10620 155 aaKnown RBP10.26□□□□□ -0.77
CLIP3-202ENST00000585466 S100A4P26447 101 aaKnown RBP10.26□□□□□ -0.77
CLIP3-202ENST00000585466 SH2D6Q7Z4S9 175 aa10.26□□□□□ -0.77
CLIP3-202ENST00000585466 A8MWV9 139 aa10.25□□□□□ -0.77
CLIP3-202ENST00000585466 SULT1A2P50226 295 aa10.25□□□□□ -0.77
CLIP3-202ENST00000585466 SPATA12Q7Z6I5 190 aa10.25□□□□□ -0.77
CLIP3-202ENST00000585466 C11orf52Q96A22 123 aa10.25□□□□□ -0.77
CLIP3-202ENST00000585466 LY96Q9Y6Y9 160 aa10.25□□□□□ -0.77
CLIP3-202ENST00000585466 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
CLIP3-202ENST00000585466 S100A9P06702 114 aaKnown RBP10.24□□□□□ -0.77
CLIP3-202ENST00000585466 RPL19P84098 196 aaKnown RBP10.24□□□□□ -0.77
CLIP3-202ENST00000585466 C14orf178Q8N769 122 aaPredicted RBP10.24□□□□□ -0.77
CLIP3-202ENST00000585466 PRADC1Q9BSG0 188 aa10.24□□□□□ -0.77
CLIP3-202ENST00000585466 DERL1Q9BUN8 251 aa10.24□□□□□ -0.77
CLIP3-202ENST00000585466 ABCA13Q86UQ4 5058 aa10.23□□□□□ -0.77
CLIP3-202ENST00000585466 C16orf90A8MZG2 172 aa10.23□□□□□ -0.77
CLIP3-202ENST00000585466 CRYGDP07320 174 aa10.23□□□□□ -0.77
CLIP3-202ENST00000585466 RAB5CP51148 216 aa10.23□□□□□ -0.77
CLIP3-202ENST00000585466 MANBALQ9NQG1 85 aa10.23□□□□□ -0.77
CLIP3-202ENST00000585466 K7EP13 123 aa10.22□□□□□ -0.77
CLIP3-202ENST00000585466 IGLV2-8P01709 118 aa10.22□□□□□ -0.77
CLIP3-202ENST00000585466 CXCL1P09341 107 aa10.22□□□□□ -0.77
CLIP3-202ENST00000585466 RPL35P42766 123 aaKnown RBP10.22□□□□□ -0.77
CLIP3-202ENST00000585466 LINC01556Q5JQF7 62 aa10.22□□□□□ -0.77
CLIP3-202ENST00000585466 BAGE2Q86Y30 109 aa10.22□□□□□ -0.77
CLIP3-202ENST00000585466 C9orf62Q8N4C0 152 aa10.22□□□□□ -0.77
CLIP3-202ENST00000585466 SFRP2Q96HF1 295 aa10.22□□□□□ -0.77
CLIP3-202ENST00000585466 GNG13Q9P2W3 67 aa10.22□□□□□ -0.77
CLIP3-202ENST00000585466 LELP1Q5T871 98 aa10.21□□□□□ -0.77
CLIP3-202ENST00000585466 SLC51BQ86UW2 128 aa10.21□□□□□ -0.77
CLIP3-202ENST00000585466 GTSF1LQ9H1H1 148 aa10.21□□□□□ -0.77
CLIP3-202ENST00000585466 MSRB1Q9NZV6 116 aa10.21□□□□□ -0.77
CLIP3-202ENST00000585466 IGHV3-38A0A0C4DH36 116 aa10.2□□□□□ -0.78
CLIP3-202ENST00000585466 SNAI2O43623 268 aa10.2□□□□□ -0.78
CLIP3-202ENST00000585466 EVI2AP22794 236 aa10.2□□□□□ -0.78
CLIP3-202ENST00000585466 SYT8Q8NBV8 401 aa10.2□□□□□ -0.78
CLIP3-202ENST00000585466 OR10AG1Q8NH19 301 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms