RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760		C9JCJ5	164 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	NXPH4	O95158	308 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	LTA	P01374	205 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	ORM1	P02763	201 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	H2AFB1	P0C5Y9	115 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	GYPE	P15421	78 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	GATA1	P15976	413 aa	Predicted RBP	9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	AKR1C3	P42330	323 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	UBE2G1	P62253	170 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	TNP2	Q05952	138 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	ZNF506	Q5JVG8	444 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	LYPD5	Q6UWN5	251 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	PTH2	Q96A98	100 aa		9.12	□□□□□ -0.95
SREBF1-223	ENST00000584760	LOC100131303	A0A0U1RQF7	123 aa		9.11	□□□□□ -0.95
SREBF1-223	ENST00000584760	PGPEP1L	A6NFU8	196 aa		9.11	□□□□□ -0.95
SREBF1-223	ENST00000584760	RS1	O15537	224 aa		9.11	□□□□□ -0.95
SREBF1-223	ENST00000584760	SH2D1A	O60880	128 aa		9.11	□□□□□ -0.95
SREBF1-223	ENST00000584760	C1QB	P02746	253 aa		9.11	□□□□□ -0.95
SREBF1-223	ENST00000584760	SRI	P30626	198 aa		9.11	□□□□□ -0.95
SREBF1-223	ENST00000584760	CFAP126	Q5VTH2	177 aa		9.11	□□□□□ -0.95
SREBF1-223	ENST00000584760	PCNP	Q8WW12	178 aa	Known RBP	9.11	□□□□□ -0.95
SREBF1-223	ENST00000584760	SCO2	A0A1W2PP80	73 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760		B4DEV8	164 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760	KRBOX1	C9JBD0	128 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760	SIVA1	O15304	175 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760	ASIP	P42127	132 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760	ZNF674	Q2M3X9	581 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760	DNLZ	Q5SXM8	178 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760	FAM162B	Q5T6X4	162 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760		Q8N1X5	172 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760	IL36B	Q9NZH7	164 aa		9.1	□□□□□ -0.95
SREBF1-223	ENST00000584760	TRAV1-1	A0A0B4J248	108 aa		9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760		H3BVH4	76 aa		9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760		M0R036	132 aa		9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760	CIDEA	O60543	219 aa		9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760	RAB5C	P51148	216 aa		9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760	PIK3CD-AS1	Q5SR53	167 aa		9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760	EIF5AL1	Q6IS14	154 aa	Known RBP	9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760	SLC25A29	Q8N8R3	303 aa		9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760	TXNDC17	Q9BRA2	123 aa		9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760	SCRT2	Q9NQ03	307 aa		9.09	□□□□□ -0.95
SREBF1-223	ENST00000584760	HSPG2	P98160	4391 aa		9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	S100A9	P06702	114 aa	Known RBP	9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	BTF3	P20290	206 aa	Known RBP	9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	S100A4	P26447	101 aa	Known RBP	9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	SULT1A2	P50226	295 aa		9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	CCL20	P78556	96 aa		9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	RHOH	Q15669	191 aa		9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	LINC01559	Q495D7	138 aa		9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	NHLRC2	Q8NBF2	726 aa		9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	MLST8	Q9BVC4	326 aa		9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	PARL	Q9H300	379 aa		9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	MANBAL	Q9NQG1	85 aa		9.08	□□□□□ -0.96
SREBF1-223	ENST00000584760	IGHV3-73	A0A0B4J1V6	119 aa		9.07	□□□□□ -0.96
SREBF1-223	ENST00000584760	TRBV6-4	A0A1B0GX49	114 aa		9.07	□□□□□ -0.96
SREBF1-223	ENST00000584760	LINC00315	P59091	139 aa		9.07	□□□□□ -0.96
SREBF1-223	ENST00000584760	SH2D6	Q7Z4S9	175 aa		9.07	□□□□□ -0.96
SREBF1-223	ENST00000584760	AKAP14	Q86UN6	197 aa		9.07	□□□□□ -0.96
SREBF1-223	ENST00000584760	SLC51B	Q86UW2	128 aa		9.07	□□□□□ -0.96
SREBF1-223	ENST00000584760	WFDC10B	Q8IUB3	73 aa		9.07	□□□□□ -0.96
SREBF1-223	ENST00000584760	C11orf52	Q96A22	123 aa		9.07	□□□□□ -0.96
SREBF1-223	ENST00000584760	GNG13	Q9P2W3	67 aa		9.07	□□□□□ -0.96
SREBF1-223	ENST00000584760	hCG_2014768	A0A024R1R8	64 aa		9.06	□□□□□ -0.96
SREBF1-223	ENST00000584760	GRIFIN	A4D1Z8	144 aa		9.06	□□□□□ -0.96
SREBF1-223	ENST00000584760		A8MWV9	139 aa		9.06	□□□□□ -0.96
SREBF1-223	ENST00000584760	ARMS2	P0C7Q2	107 aa		9.06	□□□□□ -0.96
SREBF1-223	ENST00000584760	MGST1	P10620	155 aa	Known RBP	9.06	□□□□□ -0.96
SREBF1-223	ENST00000584760	TIRAP	P58753	221 aa		9.06	□□□□□ -0.96
SREBF1-223	ENST00000584760	UFSP1	Q6NVU6	142 aa		9.06	□□□□□ -0.96
SREBF1-223	ENST00000584760	C9orf62	Q8N4C0	152 aa		9.06	□□□□□ -0.96
SREBF1-223	ENST00000584760	PRADC1	Q9BSG0	188 aa		9.06	□□□□□ -0.96
SREBF1-223	ENST00000584760	TMSB15B	A0A087X1C1	80 aa		9.05	□□□□□ -0.96
SREBF1-223	ENST00000584760	DMRTA1	Q5VZB9	504 aa		9.05	□□□□□ -0.96
SREBF1-223	ENST00000584760	ZFP2	Q6ZN57	461 aa		9.05	□□□□□ -0.96
SREBF1-223	ENST00000584760		Q6ZRN7	208 aa	Predicted RBP	9.05	□□□□□ -0.96
SREBF1-223	ENST00000584760		Q6ZSN1	163 aa		9.05	□□□□□ -0.96
SREBF1-223	ENST00000584760	DERL1	Q9BUN8	251 aa		9.05	□□□□□ -0.96
SREBF1-223	ENST00000584760	SAMD10	Q9BYL1	202 aa		9.05	□□□□□ -0.96
SREBF1-223	ENST00000584760	JPT2	Q9H910	190 aa		9.05	□□□□□ -0.96
SREBF1-223	ENST00000584760	DNAH10OS	P0CZ25	163 aa		9.04	□□□□□ -0.96
SREBF1-223	ENST00000584760	LINC00694	P0DN24	101 aa		9.04	□□□□□ -0.96
SREBF1-223	ENST00000584760	RPL35	P42766	123 aa	Known RBP	9.04	□□□□□ -0.96
SREBF1-223	ENST00000584760	BAGE2	Q86Y30	109 aa		9.04	□□□□□ -0.96
SREBF1-223	ENST00000584760	SYT8	Q8NBV8	401 aa		9.04	□□□□□ -0.96
SREBF1-223	ENST00000584760	TEX46	H3BTG2	121 aa		9.03	□□□□□ -0.96
SREBF1-223	ENST00000584760	CXCL1	P09341	107 aa		9.03	□□□□□ -0.96
SREBF1-223	ENST00000584760	RPL19	P84098	196 aa	Known RBP	9.03	□□□□□ -0.96
SREBF1-223	ENST00000584760	PHLDA3	Q9Y5J5	127 aa		9.03	□□□□□ -0.96
SREBF1-223	ENST00000584760	LY96	Q9Y6Y9	160 aa		9.03	□□□□□ -0.96
SREBF1-223	ENST00000584760	LRP1B	Q9NZR2	4599 aa		9.02	□□□□□ -0.97
SREBF1-223	ENST00000584760		K7EP13	123 aa		9.02	□□□□□ -0.97
SREBF1-223	ENST00000584760	RHOD	O00212	210 aa		9.02	□□□□□ -0.97
SREBF1-223	ENST00000584760	MEF2B	Q02080	365 aa	Predicted RBP	9.02	□□□□□ -0.97
SREBF1-223	ENST00000584760	SPATA12	Q7Z6I5	190 aa		9.02	□□□□□ -0.97
SREBF1-223	ENST00000584760	ZFP82	Q8N141	532 aa		9.02	□□□□□ -0.97
SREBF1-223	ENST00000584760		M0R381	172 aa		9.01	□□□□□ -0.97
SREBF1-223	ENST00000584760	BCL2	P10415	239 aa		9.01	□□□□□ -0.97
SREBF1-223	ENST00000584760	CENPW	Q5EE01	88 aa		9.01	□□□□□ -0.97
SREBF1-223	ENST00000584760	PRR27	Q6MZM9	219 aa		9.01	□□□□□ -0.97
SREBF1-223	ENST00000584760	C14orf178	Q8N769	122 aa	Predicted RBP	9.01	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms