RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 BAGE2Q86Y30 109 aa8.75□□□□□ -1.01
SMARCE1-218ENST00000582955 NACAE9PAV3 2078 aa8.75□□□□□ -1.01
SMARCE1-218ENST00000582955 TMSB15BA0A087X1C1 80 aa8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 GRIFINA4D1Z8 144 aa8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 PGPEP1LA6NFU8 196 aa8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 KRBOX1C9JBD0 128 aa8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 RPL35P42766 123 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 ESRGQ1W209 222 aa8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 ZNF674Q2M3X9 581 aa8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 ZNF506Q5JVG8 444 aa8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 ZNRF2Q8NHG8 242 aa8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 PCNPQ8WW12 178 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 TXNDC17Q9BRA2 123 aa8.74□□□□□ -1.01
SMARCE1-218ENST00000582955 H3BVH4 76 aa8.73□□□□□ -1.01
SMARCE1-218ENST00000582955 MEF2BQ02080 365 aaPredicted RBP8.73□□□□□ -1.01
SMARCE1-218ENST00000582955 PRR27Q6MZM9 219 aa8.73□□□□□ -1.01
SMARCE1-218ENST00000582955 C11orf52Q96A22 123 aa8.73□□□□□ -1.01
SMARCE1-218ENST00000582955 DERL1Q9BUN8 251 aa8.73□□□□□ -1.01
SMARCE1-218ENST00000582955 EPPK1P58107 5090 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 IGHV3-73A0A0B4J1V6 119 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 RS1O15537 224 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 PDE6DO43924 150 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 BCL2P10415 239 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 GYPEP15421 78 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 MRPL23Q16540 153 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 LINC01559Q495D7 138 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 PTH2Q96A98 100 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 MLST8Q9BVC4 326 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 IL36BQ9NZH7 164 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 VAX2Q9UIW0 290 aa8.72□□□□□ -1.01
SMARCE1-218ENST00000582955 K7EQD1 137 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 ARMS2P0C7Q2 107 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 SRIP30626 198 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 BLOC1S1P78537 153 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 CENPWQ5EE01 88 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 Q6ZR54 194 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 NEGR1Q7Z3B1 354 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 SYT8Q8NBV8 401 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 MED9Q9NWA0 146 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 MRPS16Q9Y3D3 137 aaKnown RBP8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 DNAH10Q8IVF4 4471 aa8.71□□□□□ -1.02
SMARCE1-218ENST00000582955 FRAS1Q86XX4 4008 aa8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 NBDYA0A0U1RRE5 68 aa8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 CIDEAO60543 219 aa8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 MGST1P10620 155 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 GATA1P15976 413 aaPredicted RBP8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 TAGLN2P37802 199 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 RPL19P84098 196 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 DNLZQ5SXM8 178 aa8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 UPK3BQ9BT76 320 aa8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 Q9H8V8 135 aa8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 PHLDA3Q9Y5J5 127 aa8.7□□□□□ -1.02
SMARCE1-218ENST00000582955 LOC100131303A0A0U1RQF7 123 aa8.69□□□□□ -1.02
SMARCE1-218ENST00000582955 RAB19A4D1S5 217 aa8.69□□□□□ -1.02
SMARCE1-218ENST00000582955 A8MWV9 139 aa8.69□□□□□ -1.02
SMARCE1-218ENST00000582955 GNG4P50150 75 aa8.69□□□□□ -1.02
SMARCE1-218ENST00000582955 SOHLH1Q5JUK2 328 aa8.69□□□□□ -1.02
SMARCE1-218ENST00000582955 PARLQ9H300 379 aa8.69□□□□□ -1.02
SMARCE1-218ENST00000582955 M0R381 172 aa8.68□□□□□ -1.02
SMARCE1-218ENST00000582955 RHOHQ15669 191 aa8.68□□□□□ -1.02
SMARCE1-218ENST00000582955 PIK3CD-AS1Q5SR53 167 aa8.68□□□□□ -1.02
SMARCE1-218ENST00000582955 C1orf134Q5TEV5 83 aa8.68□□□□□ -1.02
SMARCE1-218ENST00000582955 LYPD5Q6UWN5 251 aa8.68□□□□□ -1.02
SMARCE1-218ENST00000582955 LINC00336Q6ZUF6 198 aa8.68□□□□□ -1.02
SMARCE1-218ENST00000582955 SLC25A29Q8N8R3 303 aa8.68□□□□□ -1.02
SMARCE1-218ENST00000582955 PRADC1Q9BSG0 188 aa8.68□□□□□ -1.02
SMARCE1-218ENST00000582955 JPT2Q9H910 190 aa8.68□□□□□ -1.02
SMARCE1-218ENST00000582955 TRBV6-4A0A1B0GX49 114 aa8.67□□□□□ -1.02
SMARCE1-218ENST00000582955 RTL8CO15255 209 aa8.67□□□□□ -1.02
SMARCE1-218ENST00000582955 NXPH4O95158 308 aa8.67□□□□□ -1.02
SMARCE1-218ENST00000582955 TTC32Q5I0X7 151 aa8.67□□□□□ -1.02
SMARCE1-218ENST00000582955 ZNF575Q86XF7 245 aa8.67□□□□□ -1.02
SMARCE1-218ENST00000582955 ZFP82Q8N141 532 aa8.67□□□□□ -1.02
SMARCE1-218ENST00000582955 DAZAP1Q96EP5 407 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-218ENST00000582955 SCRT2Q9NQ03 307 aa8.67□□□□□ -1.02
SMARCE1-218ENST00000582955 DNAH2Q9P225 4427 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 RBFOX3A6NFN3 312 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 PRSS29PA6NIE9 313 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 SIVA1O15304 175 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 IGLV2-8P01709 118 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 CXCL1P09341 107 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 MED14OSP0DP75 135 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 FAM74A4Q5TZK3 123 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 ZFP2Q6ZN57 461 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 SMIM12Q96EX1 92 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 SAMD10Q9BYL1 202 aa8.66□□□□□ -1.02
SMARCE1-218ENST00000582955 TRBV20OR9-2A0A075B6H5 130 aa8.65□□□□□ -1.02
SMARCE1-218ENST00000582955 RHODO00212 210 aa8.65□□□□□ -1.02
SMARCE1-218ENST00000582955 Q6ZSN1 163 aa8.65□□□□□ -1.02
SMARCE1-218ENST00000582955 SH2D6Q7Z4S9 175 aa8.65□□□□□ -1.02
SMARCE1-218ENST00000582955 C6orf223Q8N319 242 aa8.65□□□□□ -1.02
SMARCE1-218ENST00000582955 LYPD6BQ8NI32 183 aa8.65□□□□□ -1.02
SMARCE1-218ENST00000582955 SFRP2Q96HF1 295 aa8.65□□□□□ -1.02
SMARCE1-218ENST00000582955 A0A087WWL8 130 aa8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 MUC21A0A0G2JKD1 596 aa8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 MUC21A0A140T8X8 626 aa8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 CEBPGP53567 150 aa8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 SSTP61278 116 aa8.64□□□□□ -1.03
SMARCE1-218ENST00000582955 TOR2AQ5JU69 321 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms