RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 RS1O15537 224 aa11.41□□□□□ -0.58
IFT20-210ENST00000580357 SFTA3P0C7M3 94 aa11.41□□□□□ -0.58
IFT20-210ENST00000580357 PGPEP1LA6NFU8 196 aa11.4□□□□□ -0.58
IFT20-210ENST00000580357 NKX2-5P52952 324 aaPredicted RBP11.4□□□□□ -0.58
IFT20-210ENST00000580357 SH2D6Q7Z4S9 175 aa11.4□□□□□ -0.58
IFT20-210ENST00000580357 SYT8Q8NBV8 401 aa11.4□□□□□ -0.58
IFT20-210ENST00000580357 LYPD6BQ8NI32 183 aa11.4□□□□□ -0.58
IFT20-210ENST00000580357 PCNPQ8WW12 178 aaKnown RBP11.4□□□□□ -0.58
IFT20-210ENST00000580357 BIN3Q9NQY0 253 aa11.4□□□□□ -0.58
IFT20-210ENST00000580357 MED9Q9NWA0 146 aa11.4□□□□□ -0.58
IFT20-210ENST00000580357 LINC00588Q9Y4M8 146 aa11.4□□□□□ -0.58
IFT20-210ENST00000580357 A8MWV9 139 aa11.39□□□□□ -0.59
IFT20-210ENST00000580357 M0R036 132 aa11.39□□□□□ -0.59
IFT20-210ENST00000580357 CXCL1P09341 107 aa11.39□□□□□ -0.59
IFT20-210ENST00000580357 ARMS2P0C7Q2 107 aa11.39□□□□□ -0.59
IFT20-210ENST00000580357 ESRGQ1W209 222 aa11.39□□□□□ -0.59
IFT20-210ENST00000580357 ZNF506Q5JVG8 444 aa11.39□□□□□ -0.59
IFT20-210ENST00000580357 CFAP126Q5VTH2 177 aa11.39□□□□□ -0.59
IFT20-210ENST00000580357 HYDINQ4G0P3 5121 aa11.38□□□□□ -0.59
IFT20-210ENST00000580357 MED14OSP0DP75 135 aa11.38□□□□□ -0.59
IFT20-210ENST00000580357 ZFP2Q6ZN57 461 aa11.38□□□□□ -0.59
IFT20-210ENST00000580357 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
IFT20-210ENST00000580357 NHLRC2Q8NBF2 726 aa11.38□□□□□ -0.59
IFT20-210ENST00000580357 ZNRF2Q8NHG8 242 aa11.38□□□□□ -0.59
IFT20-210ENST00000580357 DAZAP1Q96EP5 407 aaKnown RBP11.38□□□□□ -0.59
IFT20-210ENST00000580357 UPK3BQ9BT76 320 aa11.38□□□□□ -0.59
IFT20-210ENST00000580357 GRIFINA4D1Z8 144 aa11.37□□□□□ -0.59
IFT20-210ENST00000580357 RBFOX3A6NFN3 312 aa11.37□□□□□ -0.59
IFT20-210ENST00000580357 GATA1P15976 413 aaPredicted RBP11.37□□□□□ -0.59
IFT20-210ENST00000580357 GNG4P50150 75 aa11.37□□□□□ -0.59
IFT20-210ENST00000580357 PRADC1Q9BSG0 188 aa11.37□□□□□ -0.59
IFT20-210ENST00000580357 Q9H8V8 135 aa11.37□□□□□ -0.59
IFT20-210ENST00000580357 MRPS16Q9Y3D3 137 aaKnown RBP11.37□□□□□ -0.59
IFT20-210ENST00000580357 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
IFT20-210ENST00000580357 PHLDA3Q9Y5J5 127 aa11.37□□□□□ -0.59
IFT20-210ENST00000580357 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 TRBV6-4A0A1B0GX49 114 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 H3BVH4 76 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 M0R2N4 97 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 MGST1P10620 155 aaKnown RBP11.36□□□□□ -0.59
IFT20-210ENST00000580357 GYPEP15421 78 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 SRIP30626 198 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 SOHLH1Q5JUK2 328 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 Q6ZR54 194 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 LINC00336Q6ZUF6 198 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 DERL1Q9BUN8 251 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
IFT20-210ENST00000580357 TMEM250H0YL14 139 aa11.35□□□□□ -0.59
IFT20-210ENST00000580357 K7EQD1 137 aa11.35□□□□□ -0.59
IFT20-210ENST00000580357 NDUFS6O75380 124 aaKnown RBP11.35□□□□□ -0.59
IFT20-210ENST00000580357 RPS20P60866 119 aaKnown RBP11.35□□□□□ -0.59
IFT20-210ENST00000580357 CENPWQ5EE01 88 aa11.35□□□□□ -0.59
IFT20-210ENST00000580357 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
IFT20-210ENST00000580357 PRR27Q6MZM9 219 aa11.35□□□□□ -0.59
IFT20-210ENST00000580357 ZNF575Q86XF7 245 aa11.35□□□□□ -0.59
IFT20-210ENST00000580357 TMSB15BA0A087X1C1 80 aa11.34□□□□□ -0.59
IFT20-210ENST00000580357 RAB19A4D1S5 217 aa11.34□□□□□ -0.59
IFT20-210ENST00000580357 RHODO00212 210 aa11.34□□□□□ -0.59
IFT20-210ENST00000580357 RHOHQ15669 191 aa11.34□□□□□ -0.59
IFT20-210ENST00000580357 TTC32Q5I0X7 151 aa11.34□□□□□ -0.59
IFT20-210ENST00000580357 LYPD5Q6UWN5 251 aa11.34□□□□□ -0.59
IFT20-210ENST00000580357 ZFP82Q8N141 532 aa11.34□□□□□ -0.59
IFT20-210ENST00000580357 NACAE9PAV3 2078 aa11.33□□□□□ -0.6
IFT20-210ENST00000580357 NBDYA0A0U1RRE5 68 aa11.33□□□□□ -0.6
IFT20-210ENST00000580357 XKRY2A2RUG3 117 aa11.33□□□□□ -0.6
IFT20-210ENST00000580357 SLC25A29Q8N8R3 303 aa11.33□□□□□ -0.6
IFT20-210ENST00000580357 SFRP2Q96HF1 295 aa11.33□□□□□ -0.6
IFT20-210ENST00000580357 PARLQ9H300 379 aa11.33□□□□□ -0.6
IFT20-210ENST00000580357 KMT2AQ03164 3969 aa11.33□□□□□ -0.6
IFT20-210ENST00000580357 A0A1W2PPQ1 181 aa11.32□□□□□ -0.6
IFT20-210ENST00000580357 IGLV2-8P01709 118 aa11.32□□□□□ -0.6
IFT20-210ENST00000580357 C1orf134Q5TEV5 83 aa11.32□□□□□ -0.6
IFT20-210ENST00000580357 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
IFT20-210ENST00000580357 EIF5A2Q9GZV4 153 aaKnown RBP11.32□□□□□ -0.6
IFT20-210ENST00000580357 IGHV3-73A0A0B4J1V6 119 aa11.31□□□□□ -0.6
IFT20-210ENST00000580357 C19orf71A6NCJ1 209 aa11.31□□□□□ -0.6
IFT20-210ENST00000580357 SNAI2O43623 268 aa11.31□□□□□ -0.6
IFT20-210ENST00000580357 OR5AL1P0C617 328 aa11.31□□□□□ -0.6
IFT20-210ENST00000580357 BTF3P20290 206 aaKnown RBP11.31□□□□□ -0.6
IFT20-210ENST00000580357 TIRAPP58753 221 aa11.31□□□□□ -0.6
IFT20-210ENST00000580357 TEX261Q6UWH6 196 aa11.31□□□□□ -0.6
IFT20-210ENST00000580357 M0R381 172 aa11.3□□□□□ -0.6
IFT20-210ENST00000580357 SIVA1O15304 175 aa11.3□□□□□ -0.6
IFT20-210ENST00000580357 P01737 135 aa11.3□□□□□ -0.6
IFT20-210ENST00000580357 VPS13DQ5THJ4 4388 aa11.3□□□□□ -0.6
IFT20-210ENST00000580357 TRBV20OR9-2A0A075B6H5 130 aa11.29□□□□□ -0.6
IFT20-210ENST00000580357 TRAV9-2A0A087WT02 112 aa11.29□□□□□ -0.6
IFT20-210ENST00000580357 K7EP13 123 aa11.29□□□□□ -0.6
IFT20-210ENST00000580357 RPL19P84098 196 aaKnown RBP11.29□□□□□ -0.6
IFT20-210ENST00000580357 SPANXN1Q5VSR9 72 aa11.29□□□□□ -0.6
IFT20-210ENST00000580357 UFSP1Q6NVU6 142 aa11.29□□□□□ -0.6
IFT20-210ENST00000580357 OR2D3Q8NGH3 330 aa11.29□□□□□ -0.6
IFT20-210ENST00000580357 FAM210AQ96ND0 272 aa11.29□□□□□ -0.6
IFT20-210ENST00000580357 JPT2Q9H910 190 aa11.29□□□□□ -0.6
IFT20-210ENST00000580357 F2Z2F3 143 aa11.28□□□□□ -0.6
IFT20-210ENST00000580357 NXPH4O95158 308 aa11.28□□□□□ -0.6
IFT20-210ENST00000580357 CRYGDP07320 174 aa11.28□□□□□ -0.6
IFT20-210ENST00000580357 OCC1Q8TAD7 63 aa11.28□□□□□ -0.6
IFT20-210ENST00000580357 LY96Q9Y6Y9 160 aa11.28□□□□□ -0.6
IFT20-210ENST00000580357 LOC100131303A0A0U1RQF7 123 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms