RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 SIVA1O15304 175 aa18.38■□□□□ 0.53
LINC00271-205ENST00000579339 RS1O15537 224 aa18.38■□□□□ 0.53
LINC00271-205ENST00000579339 SH2D1AO60880 128 aa18.38■□□□□ 0.53
LINC00271-205ENST00000579339 ORM1P02763 201 aa18.38■□□□□ 0.53
LINC00271-205ENST00000579339 GATA1P15976 413 aaPredicted RBP18.38■□□□□ 0.53
LINC00271-205ENST00000579339 S100A4P26447 101 aaKnown RBP18.38■□□□□ 0.53
LINC00271-205ENST00000579339 LGALSLQ3ZCW2 172 aaPredicted RBP18.38■□□□□ 0.53
LINC00271-205ENST00000579339 Q6ZNX1 250 aa18.38■□□□□ 0.53
LINC00271-205ENST00000579339 TCTE3Q8IZS6 198 aa18.38■□□□□ 0.53
LINC00271-205ENST00000579339 B4DEV8 164 aa18.37■□□□□ 0.53
LINC00271-205ENST00000579339 TRBV6-1A0A0K0K1D8 114 aa18.36■□□□□ 0.53
LINC00271-205ENST00000579339 SCO2A0A1W2PP80 73 aa18.36■□□□□ 0.53
LINC00271-205ENST00000579339 LTAP01374 205 aa18.36■□□□□ 0.53
LINC00271-205ENST00000579339 ASIPP42127 132 aa18.36■□□□□ 0.53
LINC00271-205ENST00000579339 COX8CQ7Z4L0 72 aa18.36■□□□□ 0.53
LINC00271-205ENST00000579339 NHLRC2Q8NBF2 726 aa18.36■□□□□ 0.53
LINC00271-205ENST00000579339 A0A1W2PPQ1 181 aa18.35■□□□□ 0.53
LINC00271-205ENST00000579339 FAM162BQ5T6X4 162 aa18.35■□□□□ 0.53
LINC00271-205ENST00000579339 PTH2Q96A98 100 aa18.35■□□□□ 0.53
LINC00271-205ENST00000579339 GRIFINA4D1Z8 144 aa18.34■□□□□ 0.53
LINC00271-205ENST00000579339 KRBOX1C9JBD0 128 aa18.34■□□□□ 0.53
LINC00271-205ENST00000579339 H3BVH4 76 aa18.34■□□□□ 0.53
LINC00271-205ENST00000579339 TXNDC17Q9BRA2 123 aa18.34■□□□□ 0.53
LINC00271-205ENST00000579339 hCG_2014768A0A024R1R8 64 aa18.33■□□□□ 0.52
LINC00271-205ENST00000579339 TMSB15BA0A087X1C1 80 aa18.33■□□□□ 0.52
LINC00271-205ENST00000579339 CCL20P78556 96 aa18.33■□□□□ 0.52
LINC00271-205ENST00000579339 SLC25A29Q8N8R3 303 aa18.33■□□□□ 0.52
LINC00271-205ENST00000579339 ZNF674Q2M3X9 581 aa18.32■□□□□ 0.52
LINC00271-205ENST00000579339 ZNF575Q86XF7 245 aa18.32■□□□□ 0.52
LINC00271-205ENST00000579339 LINC00315P59091 139 aa18.31■□□□□ 0.52
LINC00271-205ENST00000579339 WFDC10BQ8IUB3 73 aa18.31■□□□□ 0.52
LINC00271-205ENST00000579339 IL36BQ9NZH7 164 aa18.31■□□□□ 0.52
LINC00271-205ENST00000579339 LRP1BQ9NZR2 4599 aa18.3■□□□□ 0.52
LINC00271-205ENST00000579339 C1QBP02746 253 aa18.3■□□□□ 0.52
LINC00271-205ENST00000579339 PARLQ9H300 379 aa18.3■□□□□ 0.52
LINC00271-205ENST00000579339 JPT2Q9H910 190 aa18.3■□□□□ 0.52
LINC00271-205ENST00000579339 GNG13Q9P2W3 67 aa18.3■□□□□ 0.52
LINC00271-205ENST00000579339 ARMS2P0C7Q2 107 aa18.29■□□□□ 0.52
LINC00271-205ENST00000579339 RHOHQ15669 191 aa18.29■□□□□ 0.52
LINC00271-205ENST00000579339 Q6ZSN1 163 aa18.29■□□□□ 0.52
LINC00271-205ENST00000579339 PRADC1Q9BSG0 188 aa18.29■□□□□ 0.52
LINC00271-205ENST00000579339 TRBV6-4A0A1B0GX49 114 aa18.28■□□□□ 0.52
LINC00271-205ENST00000579339 CIDEAO60543 219 aa18.28■□□□□ 0.52
LINC00271-205ENST00000579339 LINC01559Q495D7 138 aa18.28■□□□□ 0.52
LINC00271-205ENST00000579339 EIF5AL1Q6IS14 154 aaKnown RBP18.28■□□□□ 0.52
LINC00271-205ENST00000579339 RAB5CP51148 216 aa18.27■□□□□ 0.52
LINC00271-205ENST00000579339 DNLZQ5SXM8 178 aa18.27■□□□□ 0.52
LINC00271-205ENST00000579339 DMRTA1Q5VZB9 504 aa18.27■□□□□ 0.52
LINC00271-205ENST00000579339 SAMD10Q9BYL1 202 aa18.27■□□□□ 0.52
LINC00271-205ENST00000579339 A8MWV9 139 aa18.26■□□□□ 0.51
LINC00271-205ENST00000579339 S100A9P06702 114 aaKnown RBP18.26■□□□□ 0.51
LINC00271-205ENST00000579339 SULT1A2P50226 295 aa18.26■□□□□ 0.51
LINC00271-205ENST00000579339 AKAP14Q86UN6 197 aa18.26■□□□□ 0.51
LINC00271-205ENST00000579339 BAGE2Q86Y30 109 aa18.26■□□□□ 0.51
LINC00271-205ENST00000579339 MANBALQ9NQG1 85 aa18.26■□□□□ 0.51
LINC00271-205ENST00000579339 TNFRSF18Q9Y5U5 241 aa18.26■□□□□ 0.51
LINC00271-205ENST00000579339 LY96Q9Y6Y9 160 aa18.26■□□□□ 0.51
LINC00271-205ENST00000579339 TRAV1-1A0A0B4J248 108 aa18.25■□□□□ 0.51
LINC00271-205ENST00000579339 MGST1P10620 155 aaKnown RBP18.25■□□□□ 0.51
LINC00271-205ENST00000579339 SH2D6Q7Z4S9 175 aa18.25■□□□□ 0.51
LINC00271-205ENST00000579339 SLC51BQ86UW2 128 aa18.25■□□□□ 0.51
LINC00271-205ENST00000579339 DNAH5Q8TE73 4624 aa18.25■□□□□ 0.51
LINC00271-205ENST00000579339 RPL19P84098 196 aaKnown RBP18.24■□□□□ 0.51
LINC00271-205ENST00000579339 PIK3CD-AS1Q5SR53 167 aa18.24■□□□□ 0.51
LINC00271-205ENST00000579339 SYT8Q8NBV8 401 aa18.24■□□□□ 0.51
LINC00271-205ENST00000579339 MLST8Q9BVC4 326 aa18.24■□□□□ 0.51
LINC00271-205ENST00000579339 RYR1P21817 5038 aa18.24■□□□□ 0.51
LINC00271-205ENST00000579339 BTF3P20290 206 aaKnown RBP18.23■□□□□ 0.51
LINC00271-205ENST00000579339 ZFP2Q6ZN57 461 aa18.23■□□□□ 0.51
LINC00271-205ENST00000579339 DERL1Q9BUN8 251 aa18.23■□□□□ 0.51
LINC00271-205ENST00000579339 SCRT2Q9NQ03 307 aa18.23■□□□□ 0.51
LINC00271-205ENST00000579339 PHLDA3Q9Y5J5 127 aa18.23■□□□□ 0.51
LINC00271-205ENST00000579339 M0R381 172 aa18.22■□□□□ 0.51
LINC00271-205ENST00000579339 RPL35P42766 123 aaKnown RBP18.22■□□□□ 0.51
LINC00271-205ENST00000579339 PRR27Q6MZM9 219 aa18.22■□□□□ 0.51
LINC00271-205ENST00000579339 UFSP1Q6NVU6 142 aa18.22■□□□□ 0.51
LINC00271-205ENST00000579339 Q6ZRN7 208 aaPredicted RBP18.22■□□□□ 0.51
LINC00271-205ENST00000579339 TIRAPP58753 221 aa18.21■□□□□ 0.51
LINC00271-205ENST00000579339 C9orf62Q8N4C0 152 aa18.21■□□□□ 0.51
LINC00271-205ENST00000579339 C11orf52Q96A22 123 aa18.21■□□□□ 0.51
LINC00271-205ENST00000579339 TEX46H3BTG2 121 aa18.2■□□□□ 0.5
LINC00271-205ENST00000579339 DNAH10OSP0CZ25 163 aa18.2■□□□□ 0.5
LINC00271-205ENST00000579339 MED14OSP0DP75 135 aa18.2■□□□□ 0.5
LINC00271-205ENST00000579339 FAM74A4Q5TZK3 123 aa18.2■□□□□ 0.5
LINC00271-205ENST00000579339 C14orf178Q8N769 122 aaPredicted RBP18.2■□□□□ 0.5
LINC00271-205ENST00000579339 Q9UF83 564 aa18.2■□□□□ 0.5
LINC00271-205ENST00000579339 TRAV9-2A0A087WT02 112 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 A0A087WWL8 130 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 GAGE12JA6NER3 117 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 C16orf90A8MZG2 172 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 EVI2AP22794 236 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 GAGE1Q13065 139 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 GAGE4Q13068 117 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 GAGE5Q13069 117 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 GAGE13Q4V321 117 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 SPATA12Q7Z6I5 190 aa18.19■□□□□ 0.5
LINC00271-205ENST00000579339 ATP6V0E2Q8NHE4 81 aa18.18■□□□□ 0.5
LINC00271-205ENST00000579339 OR10J3Q5JRS4 329 aa18.17■□□□□ 0.5
LINC00271-205ENST00000579339 ZFP82Q8N141 532 aa18.17■□□□□ 0.5
LINC00271-205ENST00000579339 SFRP2Q96HF1 295 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms