RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 PTH2Q96A98 100 aa10.65□□□□□ -0.7
LITAF-217ENST00000575426 FAM210AQ96ND0 272 aa10.65□□□□□ -0.7
LITAF-217ENST00000575426 PRO0255Q9UI72 69 aa10.65□□□□□ -0.7
LITAF-217ENST00000575426 HHLA3Q9XRX5 114 aa10.65□□□□□ -0.7
LITAF-217ENST00000575426 CIDEAO60543 219 aa10.64□□□□□ -0.71
LITAF-217ENST00000575426 ARMS2P0C7Q2 107 aa10.64□□□□□ -0.71
LITAF-217ENST00000575426 FHL2Q14192 279 aa10.64□□□□□ -0.71
LITAF-217ENST00000575426 PCNPQ8WW12 178 aaKnown RBP10.64□□□□□ -0.71
LITAF-217ENST00000575426 ZNF479Q96JC4 524 aa10.64□□□□□ -0.71
LITAF-217ENST00000575426 PHLDA3Q9Y5J5 127 aa10.64□□□□□ -0.71
LITAF-217ENST00000575426 DYNC2H1Q8NCM8 4307 aaKnown RBP10.63□□□□□ -0.71
LITAF-217ENST00000575426 NDUFS6O75380 124 aaKnown RBP10.63□□□□□ -0.71
LITAF-217ENST00000575426 IGLV2-8P01709 118 aa10.63□□□□□ -0.71
LITAF-217ENST00000575426 RNF212Q495C1 297 aa10.63□□□□□ -0.71
LITAF-217ENST00000575426 PIK3CD-AS1Q5SR53 167 aa10.63□□□□□ -0.71
LITAF-217ENST00000575426 POM121L12Q8N7R1 296 aa10.63□□□□□ -0.71
LITAF-217ENST00000575426 PARLQ9H300 379 aa10.63□□□□□ -0.71
LITAF-217ENST00000575426 KMT2CQ8NEZ4 4911 aaKnown RBP10.62□□□□□ -0.71
LITAF-217ENST00000575426 RS1O15537 224 aa10.62□□□□□ -0.71
LITAF-217ENST00000575426 CXCL1P09341 107 aa10.62□□□□□ -0.71
LITAF-217ENST00000575426 CRYBA4P53673 196 aa10.62□□□□□ -0.71
LITAF-217ENST00000575426 CCL18P55774 89 aa10.62□□□□□ -0.71
LITAF-217ENST00000575426 RPS20P60866 119 aaKnown RBP10.62□□□□□ -0.71
LITAF-217ENST00000575426 RPL19P84098 196 aaKnown RBP10.62□□□□□ -0.71
LITAF-217ENST00000575426 LYSTQ99698 3801 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 PLECQ15149 4684 aaKnown RBP10.61□□□□□ -0.71
LITAF-217ENST00000575426 TRBV20OR9-2A0A075B6H5 130 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 XKRY2A2RUG3 117 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 A8MWV9 139 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 P01737 135 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 MED14OSP0DP75 135 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 RAB14P61106 215 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 PEA15Q15121 130 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 CFAP126Q5VTH2 177 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 VSIG2Q96IQ7 327 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 ICOSQ9Y6W8 199 aa10.61□□□□□ -0.71
LITAF-217ENST00000575426 MRPL23Q16540 153 aaKnown RBP10.6□□□□□ -0.71
LITAF-217ENST00000575426 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
LITAF-217ENST00000575426 ZFP82Q8N141 532 aa10.6□□□□□ -0.71
LITAF-217ENST00000575426 OR2D3Q8NGH3 330 aa10.6□□□□□ -0.71
LITAF-217ENST00000575426 OCC1Q8TAD7 63 aa10.6□□□□□ -0.71
LITAF-217ENST00000575426 A0A096LPF7 62 aa10.59□□□□□ -0.71
LITAF-217ENST00000575426 C19orf71A6NCJ1 209 aa10.59□□□□□ -0.71
LITAF-217ENST00000575426 M0R381 172 aa10.59□□□□□ -0.71
LITAF-217ENST00000575426 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
LITAF-217ENST00000575426 FAM3BP58499 235 aaPredicted RBP10.59□□□□□ -0.71
LITAF-217ENST00000575426 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
LITAF-217ENST00000575426 SMIM7Q9BQ49 75 aa10.59□□□□□ -0.71
LITAF-217ENST00000575426 SCRT2Q9NQ03 307 aa10.59□□□□□ -0.71
LITAF-217ENST00000575426 IGHV3-73A0A0B4J1V6 119 aa10.58□□□□□ -0.72
LITAF-217ENST00000575426 ZNF727A8MUV8 499 aa10.58□□□□□ -0.72
LITAF-217ENST00000575426 SPANXN1Q5VSR9 72 aa10.58□□□□□ -0.72
LITAF-217ENST00000575426 PRADC1Q9BSG0 188 aa10.58□□□□□ -0.72
LITAF-217ENST00000575426 SMDT1Q9H4I9 107 aa10.58□□□□□ -0.72
LITAF-217ENST00000575426 OR5AL1P0C617 328 aa10.57□□□□□ -0.72
LITAF-217ENST00000575426 GYPEP15421 78 aa10.57□□□□□ -0.72
LITAF-217ENST00000575426 GATA1P15976 413 aaPredicted RBP10.57□□□□□ -0.72
LITAF-217ENST00000575426 SRIP30626 198 aa10.57□□□□□ -0.72
LITAF-217ENST00000575426 ZFP2Q6ZN57 461 aa10.57□□□□□ -0.72
LITAF-217ENST00000575426 NUDT10Q8NFP7 164 aa10.57□□□□□ -0.72
LITAF-217ENST00000575426 NUDT11Q96G61 164 aa10.57□□□□□ -0.72
LITAF-217ENST00000575426 LY96Q9Y6Y9 160 aa10.57□□□□□ -0.72
LITAF-217ENST00000575426 ALMS1Q8TCU4 4167 aa10.57□□□□□ -0.72
LITAF-217ENST00000575426 K7EN84 100 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 RHODO00212 210 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 SNAI2O43623 268 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 RHOHQ15669 191 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 FAM74A3Q4VXF1 159 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 NEGR1Q7Z3B1 354 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 FER1L6-AS1Q8NA97 138 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 SFRP2Q96HF1 295 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 TPPP3Q9BW30 176 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 SSBP4Q9BWG4 385 aaPredicted RBP10.56□□□□□ -0.72
LITAF-217ENST00000575426 JPT2Q9H910 190 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 LINC00588Q9Y4M8 146 aa10.56□□□□□ -0.72
LITAF-217ENST00000575426 TRBV6-4A0A1B0GX49 114 aa10.55□□□□□ -0.72
LITAF-217ENST00000575426 K7EQD1 137 aa10.55□□□□□ -0.72
LITAF-217ENST00000575426 GZMBP10144 247 aa10.55□□□□□ -0.72
LITAF-217ENST00000575426 SSTP61278 116 aa10.55□□□□□ -0.72
LITAF-217ENST00000575426 ESRGQ1W209 222 aa10.55□□□□□ -0.72
LITAF-217ENST00000575426 FAM74A4Q5TZK3 123 aa10.55□□□□□ -0.72
LITAF-217ENST00000575426 SH2D6Q7Z4S9 175 aa10.55□□□□□ -0.72
LITAF-217ENST00000575426 SLC25A29Q8N8R3 303 aa10.55□□□□□ -0.72
LITAF-217ENST00000575426 RNASE7Q9H1E1 156 aaKnown RBP10.55□□□□□ -0.72
LITAF-217ENST00000575426 RPP21Q9H633 154 aaKnown RBP10.55□□□□□ -0.72
LITAF-217ENST00000575426 F2Z2F3 143 aa10.54□□□□□ -0.72
LITAF-217ENST00000575426 GATCO43716 136 aaKnown RBP10.54□□□□□ -0.72
LITAF-217ENST00000575426 ERVFC1-1P60608 527 aa10.54□□□□□ -0.72
LITAF-217ENST00000575426 TMEM241Q24JQ0 296 aa10.54□□□□□ -0.72
LITAF-217ENST00000575426 OR10AG1Q8NH19 301 aa10.54□□□□□ -0.72
LITAF-217ENST00000575426 IGLV2-18A0A075B6J9 118 aa10.53□□□□□ -0.72
LITAF-217ENST00000575426 A0A087WWL8 130 aa10.53□□□□□ -0.72
LITAF-217ENST00000575426 MUC21A0A0G2JKD1 596 aa10.53□□□□□ -0.72
LITAF-217ENST00000575426 MUC21A0A140T8X8 626 aa10.53□□□□□ -0.72
LITAF-217ENST00000575426 A0A1W2PPQ1 181 aa10.53□□□□□ -0.72
LITAF-217ENST00000575426 SMIM17P0DL12 118 aa10.53□□□□□ -0.72
LITAF-217ENST00000575426 CACNG7P62955 275 aa10.53□□□□□ -0.72
LITAF-217ENST00000575426 FAM231DQ6ZW35 169 aa10.53□□□□□ -0.72
LITAF-217ENST00000575426 SAMD10Q9BYL1 202 aa10.53□□□□□ -0.72
LITAF-217ENST00000575426 LOC100131303A0A0U1RQF7 123 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 375.7 ms