RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 PRO0255Q9UI72 69 aa8.96□□□□□ -0.98
CDT1-203ENST00000569140 HHLA3Q9XRX5 114 aa8.96□□□□□ -0.98
CDT1-203ENST00000569140 HYDINQ4G0P3 5121 aa8.96□□□□□ -0.98
CDT1-203ENST00000569140 RYR3Q15413 4870 aa8.96□□□□□ -0.98
CDT1-203ENST00000569140 ARMS2P0C7Q2 107 aa8.95□□□□□ -0.98
CDT1-203ENST00000569140 CCL18P55774 89 aa8.95□□□□□ -0.98
CDT1-203ENST00000569140 FHL2Q14192 279 aa8.95□□□□□ -0.98
CDT1-203ENST00000569140 SYT8Q8NBV8 401 aa8.95□□□□□ -0.98
CDT1-203ENST00000569140 LYPD6BQ8NI32 183 aa8.95□□□□□ -0.98
CDT1-203ENST00000569140 IL36BQ9NZH7 164 aa8.95□□□□□ -0.98
CDT1-203ENST00000569140 PHLDA3Q9Y5J5 127 aa8.95□□□□□ -0.98
CDT1-203ENST00000569140 ICOSQ9Y6W8 199 aa8.95□□□□□ -0.98
CDT1-203ENST00000569140 M0R381 172 aa8.94□□□□□ -0.98
CDT1-203ENST00000569140 CRYBA4P53673 196 aa8.94□□□□□ -0.98
CDT1-203ENST00000569140 SLAQ13239 276 aa8.94□□□□□ -0.98
CDT1-203ENST00000569140 VSIG2Q96IQ7 327 aa8.94□□□□□ -0.98
CDT1-203ENST00000569140 PARLQ9H300 379 aa8.94□□□□□ -0.98
CDT1-203ENST00000569140 IGLV2-18A0A075B6J9 118 aa8.93□□□□□ -0.98
CDT1-203ENST00000569140 A0A096LPF7 62 aa8.93□□□□□ -0.98
CDT1-203ENST00000569140 P01737 135 aa8.93□□□□□ -0.98
CDT1-203ENST00000569140 SSTP61278 116 aa8.93□□□□□ -0.98
CDT1-203ENST00000569140 CFAP126Q5VTH2 177 aa8.93□□□□□ -0.98
CDT1-203ENST00000569140 OR2D3Q8NGH3 330 aa8.93□□□□□ -0.98
CDT1-203ENST00000569140 FAM210AQ96ND0 272 aa8.93□□□□□ -0.98
CDT1-203ENST00000569140 TPPP3Q9BW30 176 aa8.93□□□□□ -0.98
CDT1-203ENST00000569140 BIN3Q9NQY0 253 aa8.93□□□□□ -0.98
CDT1-203ENST00000569140 SACSQ9NZJ4 4579 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 TRBV20OR9-2A0A075B6H5 130 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 MUC21A0A0G2JKD1 596 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 MUC21A0A140T8X8 626 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 TMEM250H0YL14 139 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 H3BNG1 76 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 M0R2N4 97 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 RS1O15537 224 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 IGLV2-8P01709 118 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 GYPEP15421 78 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 RNF212Q495C1 297 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 FAM74A4Q5TZK3 123 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 ZFP82Q8N141 532 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 SMIM12Q96EX1 92 aa8.92□□□□□ -0.98
CDT1-203ENST00000569140 A8MWV9 139 aa8.91□□□□□ -0.98
CDT1-203ENST00000569140 SRIP30626 198 aa8.91□□□□□ -0.98
CDT1-203ENST00000569140 DNLZQ5SXM8 178 aa8.91□□□□□ -0.98
CDT1-203ENST00000569140 DMRTA1Q5VZB9 504 aa8.91□□□□□ -0.98
CDT1-203ENST00000569140 PTH2Q96A98 100 aa8.91□□□□□ -0.98
CDT1-203ENST00000569140 A0A087WWL8 130 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 LOC100131303A0A0U1RQF7 123 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 XKRY2A2RUG3 117 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 GZMBP10144 247 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 RPS20P60866 119 aaKnown RBP8.9□□□□□ -0.98
CDT1-203ENST00000569140 MRPL23Q16540 153 aaKnown RBP8.9□□□□□ -0.98
CDT1-203ENST00000569140 SPANXN1Q5VSR9 72 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 SMIM7Q9BQ49 75 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 PRADC1Q9BSG0 188 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 JPT2Q9H910 190 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 LINC00588Q9Y4M8 146 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 DNAH1Q9P2D7 4330 aa8.9□□□□□ -0.98
CDT1-203ENST00000569140 C19orf71A6NCJ1 209 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 ZNF727A8MUV8 499 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 K7EQD1 137 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 CXCL1P09341 107 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 MED14OSP0DP75 135 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 GATA1P15976 413 aaPredicted RBP8.89□□□□□ -0.99
CDT1-203ENST00000569140 RAB14P61106 215 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 RHOHQ15669 191 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 ESRGQ1W209 222 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 OR10AG1Q8NH19 301 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 OCC1Q8TAD7 63 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 SAMD10Q9BYL1 202 aa8.89□□□□□ -0.99
CDT1-203ENST00000569140 RNASE7Q9H1E1 156 aaKnown RBP8.89□□□□□ -0.99
CDT1-203ENST00000569140 MUC4Q99102 2169 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 K7EN84 100 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 RHODO00212 210 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 CIDEAO60543 219 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 SRP19P09132 144 aaKnown RBP8.88□□□□□ -0.99
CDT1-203ENST00000569140 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
CDT1-203ENST00000569140 PEA15Q15121 130 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 NEGR1Q7Z3B1 354 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 SLC25A29Q8N8R3 303 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 FER1L6-AS1Q8NA97 138 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 NUDT10Q8NFP7 164 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 NUDT11Q96G61 164 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 RPP21Q9H633 154 aaKnown RBP8.88□□□□□ -0.99
CDT1-203ENST00000569140 SCRT2Q9NQ03 307 aa8.88□□□□□ -0.99
CDT1-203ENST00000569140 PIK3CD-AS1Q5SR53 167 aa8.87□□□□□ -0.99
CDT1-203ENST00000569140 ZNF575Q86XF7 245 aa8.87□□□□□ -0.99
CDT1-203ENST00000569140 SFRP2Q96HF1 295 aa8.87□□□□□ -0.99
CDT1-203ENST00000569140 TRBV6-4A0A1B0GX49 114 aa8.86□□□□□ -0.99
CDT1-203ENST00000569140 SNAI2O43623 268 aa8.86□□□□□ -0.99
CDT1-203ENST00000569140 OR5AL1P0C617 328 aa8.86□□□□□ -0.99
CDT1-203ENST00000569140 SMIM17P0DL12 118 aa8.86□□□□□ -0.99
CDT1-203ENST00000569140 ERVFC1-1P60608 527 aa8.86□□□□□ -0.99
CDT1-203ENST00000569140 ZNF56Q15929 161 aa8.86□□□□□ -0.99
CDT1-203ENST00000569140 ZFP2Q6ZN57 461 aa8.86□□□□□ -0.99
CDT1-203ENST00000569140 ZNRF2Q8NHG8 242 aa8.86□□□□□ -0.99
CDT1-203ENST00000569140 MRPS16Q9Y3D3 137 aaKnown RBP8.86□□□□□ -0.99
CDT1-203ENST00000569140 GAGE12JA6NER3 117 aa8.85□□□□□ -0.99
CDT1-203ENST00000569140 F5H697 171 aa8.85□□□□□ -0.99
CDT1-203ENST00000569140 GATCO43716 136 aaKnown RBP8.85□□□□□ -0.99
CDT1-203ENST00000569140 SRSF3P84103 164 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms