RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 FAM231CP0DMU5 169 aa8.9□□□□□ -0.98
GINS3-209ENST00000567909 CEBPGP53567 150 aa8.9□□□□□ -0.98
GINS3-209ENST00000567909 RPL19P84098 196 aaKnown RBP8.9□□□□□ -0.98
GINS3-209ENST00000567909 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
GINS3-209ENST00000567909 UBE2DNLQ8IWF7 75 aa8.9□□□□□ -0.98
GINS3-209ENST00000567909 OR4C5Q8NGB2 326 aa8.9□□□□□ -0.98
GINS3-209ENST00000567909 ZNF479Q96JC4 524 aa8.9□□□□□ -0.98
GINS3-209ENST00000567909 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
GINS3-209ENST00000567909 TRBV20OR9-2A0A075B6H5 130 aa8.89□□□□□ -0.99
GINS3-209ENST00000567909 TRAV4A0A0B4J268 109 aa8.89□□□□□ -0.99
GINS3-209ENST00000567909 LINC00862A6NCI5 91 aa8.89□□□□□ -0.99
GINS3-209ENST00000567909 IGLV2-8P01709 118 aa8.89□□□□□ -0.99
GINS3-209ENST00000567909 ARMS2P0C7Q2 107 aa8.89□□□□□ -0.99
GINS3-209ENST00000567909 FHL2Q14192 279 aa8.89□□□□□ -0.99
GINS3-209ENST00000567909 POM121L12Q8N7R1 296 aa8.89□□□□□ -0.99
GINS3-209ENST00000567909 DNAH6Q9C0G6 4158 aa8.89□□□□□ -0.99
GINS3-209ENST00000567909 TMEM250H0YL14 139 aa8.88□□□□□ -0.99
GINS3-209ENST00000567909 PAX4O43316 350 aa8.88□□□□□ -0.99
GINS3-209ENST00000567909 UQCC3Q6UW78 93 aa8.88□□□□□ -0.99
GINS3-209ENST00000567909 DAZAP1Q96EP5 407 aaKnown RBP8.88□□□□□ -0.99
GINS3-209ENST00000567909 VSIG2Q96IQ7 327 aa8.88□□□□□ -0.99
GINS3-209ENST00000567909 FAM210AQ96ND0 272 aa8.88□□□□□ -0.99
GINS3-209ENST00000567909 PARLQ9H300 379 aa8.88□□□□□ -0.99
GINS3-209ENST00000567909 IL36BQ9NZH7 164 aa8.88□□□□□ -0.99
GINS3-209ENST00000567909 PRO0255Q9UI72 69 aa8.88□□□□□ -0.99
GINS3-209ENST00000567909 HHLA3Q9XRX5 114 aa8.88□□□□□ -0.99
GINS3-209ENST00000567909 KMT2AQ03164 3969 aa8.87□□□□□ -0.99
GINS3-209ENST00000567909 IGHV3-73A0A0B4J1V6 119 aa8.87□□□□□ -0.99
GINS3-209ENST00000567909 CRYBA4P53673 196 aa8.87□□□□□ -0.99
GINS3-209ENST00000567909 SLAQ13239 276 aa8.87□□□□□ -0.99
GINS3-209ENST00000567909 DNLZQ5SXM8 178 aa8.87□□□□□ -0.99
GINS3-209ENST00000567909 ZNF575Q86XF7 245 aa8.87□□□□□ -0.99
GINS3-209ENST00000567909 SMIM12Q96EX1 92 aa8.87□□□□□ -0.99
GINS3-209ENST00000567909 PHLDA3Q9Y5J5 127 aa8.87□□□□□ -0.99
GINS3-209ENST00000567909 H3BNG1 76 aa8.86□□□□□ -0.99
GINS3-209ENST00000567909 M0R381 172 aa8.86□□□□□ -0.99
GINS3-209ENST00000567909 RS1O15537 224 aa8.86□□□□□ -0.99
GINS3-209ENST00000567909 PEA15Q15121 130 aa8.86□□□□□ -0.99
GINS3-209ENST00000567909 CFAP126Q5VTH2 177 aa8.86□□□□□ -0.99
GINS3-209ENST00000567909 DMRTA1Q5VZB9 504 aa8.86□□□□□ -0.99
GINS3-209ENST00000567909 SYT8Q8NBV8 401 aa8.86□□□□□ -0.99
GINS3-209ENST00000567909 PTH2Q96A98 100 aa8.86□□□□□ -0.99
GINS3-209ENST00000567909 BIN3Q9NQY0 253 aa8.86□□□□□ -0.99
GINS3-209ENST00000567909 A0A096LPF7 62 aa8.85□□□□□ -0.99
GINS3-209ENST00000567909 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
GINS3-209ENST00000567909 CCL18P55774 89 aa8.85□□□□□ -0.99
GINS3-209ENST00000567909 OR2D3Q8NGH3 330 aa8.85□□□□□ -0.99
GINS3-209ENST00000567909 OCC1Q8TAD7 63 aa8.85□□□□□ -0.99
GINS3-209ENST00000567909 JPT2Q9H910 190 aa8.85□□□□□ -0.99
GINS3-209ENST00000567909 ICOSQ9Y6W8 199 aa8.85□□□□□ -0.99
GINS3-209ENST00000567909 MUC21A0A0G2JKD1 596 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 MUC21A0A140T8X8 626 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 C19orf71A6NCJ1 209 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 A8MWV9 139 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 P01737 135 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 SRP19P09132 144 aaKnown RBP8.84□□□□□ -0.99
GINS3-209ENST00000567909 CXCL1P09341 107 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 GZMBP10144 247 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 SSTP61278 116 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 RNF212Q495C1 297 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 SMIM7Q9BQ49 75 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 SCRT2Q9NQ03 307 aa8.84□□□□□ -0.99
GINS3-209ENST00000567909 K7EN84 100 aa8.83□□□□□ -1
GINS3-209ENST00000567909 MED14OSP0DP75 135 aa8.83□□□□□ -1
GINS3-209ENST00000567909 GYPEP15421 78 aa8.83□□□□□ -1
GINS3-209ENST00000567909 GATA1P15976 413 aaPredicted RBP8.83□□□□□ -1
GINS3-209ENST00000567909 S100A1P23297 94 aa8.83□□□□□ -1
GINS3-209ENST00000567909 RPS20P60866 119 aaKnown RBP8.83□□□□□ -1
GINS3-209ENST00000567909 PIK3CD-AS1Q5SR53 167 aa8.83□□□□□ -1
GINS3-209ENST00000567909 COMMD7Q86VX2 200 aa8.83□□□□□ -1
GINS3-209ENST00000567909 ZFP82Q8N141 532 aa8.83□□□□□ -1
GINS3-209ENST00000567909 TPPP3Q9BW30 176 aa8.83□□□□□ -1
GINS3-209ENST00000567909 SAMD10Q9BYL1 202 aa8.83□□□□□ -1
GINS3-209ENST00000567909 LINC00588Q9Y4M8 146 aa8.83□□□□□ -1
GINS3-209ENST00000567909 IGLV2-18A0A075B6J9 118 aa8.82□□□□□ -1
GINS3-209ENST00000567909 LOC100131303A0A0U1RQF7 123 aa8.82□□□□□ -1
GINS3-209ENST00000567909 ZNF727A8MUV8 499 aa8.82□□□□□ -1
GINS3-209ENST00000567909 CIDEAO60543 219 aa8.82□□□□□ -1
GINS3-209ENST00000567909 MRPL23Q16540 153 aaKnown RBP8.82□□□□□ -1
GINS3-209ENST00000567909 ESRGQ1W209 222 aa8.82□□□□□ -1
GINS3-209ENST00000567909 FAM74A4Q5TZK3 123 aa8.82□□□□□ -1
GINS3-209ENST00000567909 NUDT10Q8NFP7 164 aa8.82□□□□□ -1
GINS3-209ENST00000567909 OR10AG1Q8NH19 301 aa8.82□□□□□ -1
GINS3-209ENST00000567909 NUDT11Q96G61 164 aa8.82□□□□□ -1
GINS3-209ENST00000567909 RNASE7Q9H1E1 156 aaKnown RBP8.82□□□□□ -1
GINS3-209ENST00000567909 A0A087WWL8 130 aa8.81□□□□□ -1
GINS3-209ENST00000567909 XKRY2A2RUG3 117 aa8.81□□□□□ -1
GINS3-209ENST00000567909 C9JQL5 133 aa8.81□□□□□ -1
GINS3-209ENST00000567909 K7EQD1 137 aa8.81□□□□□ -1
GINS3-209ENST00000567909 M0R2N4 97 aa8.81□□□□□ -1
GINS3-209ENST00000567909 SNAI2O43623 268 aa8.81□□□□□ -1
GINS3-209ENST00000567909 SRIP30626 198 aa8.81□□□□□ -1
GINS3-209ENST00000567909 SRSF3P84103 164 aaKnown RBP8.81□□□□□ -1
GINS3-209ENST00000567909 SPANXN1Q5VSR9 72 aa8.81□□□□□ -1
GINS3-209ENST00000567909 SLC25A29Q8N8R3 303 aa8.81□□□□□ -1
GINS3-209ENST00000567909 OR5AL1P0C617 328 aa8.8□□□□□ -1
GINS3-209ENST00000567909 ZFP2Q6ZN57 461 aa8.8□□□□□ -1
GINS3-209ENST00000567909 NEGR1Q7Z3B1 354 aa8.8□□□□□ -1
GINS3-209ENST00000567909 FER1L6-AS1Q8NA97 138 aa8.8□□□□□ -1
GINS3-209ENST00000567909 SFRP2Q96HF1 295 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms