RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 IGKCP01834 107 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 ZNF25P17030 456 aaPredicted RBP9.99□□□□□ -0.81
LINC00563-201ENST00000566370 EDN2P20800 178 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 FXYD7P58549 80 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 Q6ZQT7 251 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 POM121L12Q8N7R1 296 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 KLHL30-AS1Q8NEE0 82 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 OR11H1Q8NG94 326 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 FOXC2Q99958 501 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 MCRIP2Q9BUT9 160 aaKnown RBP9.99□□□□□ -0.81
LINC00563-201ENST00000566370 SIVA1O15304 175 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 DLEU1O43261 78 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 PLNP26678 52 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 SLURP1P55000 103 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 KIR3DS1Q14943 382 aa9.99□□□□□ -0.81
LINC00563-201ENST00000566370 DNAJC9-AS1A6NH13 148 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 F5H697 171 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 GAGE1Q13065 139 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 TMEM97Q5BJF2 176 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 RASL10AQ92737 203 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 RAX2Q96IS3 184 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 C9orf85Q96MD7 179 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 SCGB3A1Q96QR1 104 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 SELENOKQ9Y6D0 94 aa9.98□□□□□ -0.81
LINC00563-201ENST00000566370 CSPG4Q6UVK1 2322 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 TRAV12-1A0A0B4J245 112 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 TRAV25A0A0B4J276 109 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 IGHV3-16A0A0C4DH30 117 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 GAS8-AS1O95177 125 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 HLA-DRB4P13762 266 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 ODF1Q14990 250 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 WFDC11Q8NEX6 87 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 KIR2DL4Q99706 377 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 HLA-DRB4X5D2U9 266 aa9.97□□□□□ -0.81
LINC00563-201ENST00000566370 LRRK2Q5S007 2527 aa9.96□□□□□ -0.81
LINC00563-201ENST00000566370 A0A087WX48 190 aa9.96□□□□□ -0.82
LINC00563-201ENST00000566370 H7C1H1 209 aa9.96□□□□□ -0.82
LINC00563-201ENST00000566370 VCYO14598 125 aa9.96□□□□□ -0.82
LINC00563-201ENST00000566370 PLA2G2AP14555 144 aa9.96□□□□□ -0.82
LINC00563-201ENST00000566370 DEFB131AP59861 70 aa9.96□□□□□ -0.82
LINC00563-201ENST00000566370 Q6ZSV7 163 aa9.96□□□□□ -0.82
LINC00563-201ENST00000566370 STPG4Q8N801 248 aa9.96□□□□□ -0.82
LINC00563-201ENST00000566370 TOMM6Q96B49 74 aa9.96□□□□□ -0.82
LINC00563-201ENST00000566370 SPAG8Q99932 426 aaPredicted RBP9.96□□□□□ -0.82
LINC00563-201ENST00000566370 YAE1D1Q9NRH1 226 aa9.96□□□□□ -0.82
LINC00563-201ENST00000566370 CBY3A6NI87 242 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 NMUP48645 174 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 CMC4P56277 68 aaPredicted RBP9.95□□□□□ -0.82
LINC00563-201ENST00000566370 SEC11AP67812 179 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 ZNF56Q15929 161 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 ANKRD39Q53RE8 183 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 BOD1L2Q8IYS8 172 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 ORAOV1Q8WV07 137 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 CSTL1Q9H114 145 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 ZMAT4Q9H898 229 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 CYSLTR1Q9Y271 337 aa9.95□□□□□ -0.82
LINC00563-201ENST00000566370 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
LINC00563-201ENST00000566370 A6NDN8 102 aa9.94□□□□□ -0.82
LINC00563-201ENST00000566370 DEFB136Q30KP8 78 aa9.94□□□□□ -0.82
LINC00563-201ENST00000566370 MPV17L2Q567V2 206 aa9.94□□□□□ -0.82
LINC00563-201ENST00000566370 TRPT1Q86TN4 253 aaKnown RBP9.94□□□□□ -0.82
LINC00563-201ENST00000566370 ZNF418Q8TF45 676 aaPredicted RBP9.94□□□□□ -0.82
LINC00563-201ENST00000566370 DKK2Q9UBU2 259 aa9.94□□□□□ -0.82
LINC00563-201ENST00000566370 NAV2Q8IVL1 2488 aa9.94□□□□□ -0.82
LINC00563-201ENST00000566370 A8MTW9 85 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 ZNF415Q09FC8 603 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 HSD52Q0P140 79 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 PAPPA-AS1Q5QFB9 102 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 BVES-AS1Q5T3Y7 98 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 SUMO4Q6EEV6 95 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 C2orf66Q6UXQ4 117 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 Q8N1Y9 231 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 RPL39LQ96EH5 51 aaKnown RBP9.93□□□□□ -0.82
LINC00563-201ENST00000566370 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 KIF25-AS1Q9Y6Z4 181 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 CREBBPQ92793 2442 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 ZFYVE26Q68DK2 2539 aa9.93□□□□□ -0.82
LINC00563-201ENST00000566370 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
LINC00563-201ENST00000566370 F8VRH5 84 aa9.92□□□□□ -0.82
LINC00563-201ENST00000566370 PIK3CD-AS1Q5SR53 167 aa9.92□□□□□ -0.82
LINC00563-201ENST00000566370 FAM74A4Q5TZK3 123 aa9.92□□□□□ -0.82
LINC00563-201ENST00000566370 AMTNQ6UX39 209 aa9.92□□□□□ -0.82
LINC00563-201ENST00000566370 ERASQ7Z444 233 aa9.92□□□□□ -0.82
LINC00563-201ENST00000566370 DLX4Q92988 240 aaPredicted RBP9.92□□□□□ -0.82
LINC00563-201ENST00000566370 CHTOPQ9Y3Y2 248 aaKnown RBP9.92□□□□□ -0.82
LINC00563-201ENST00000566370 COX11Q9Y6N1 276 aa9.92□□□□□ -0.82
LINC00563-201ENST00000566370 H3BMM0 161 aa9.91□□□□□ -0.82
LINC00563-201ENST00000566370 TMEM61Q8N0U2 210 aa9.91□□□□□ -0.82
LINC00563-201ENST00000566370 TMEM141Q96I45 108 aa9.91□□□□□ -0.82
LINC00563-201ENST00000566370 CLUHP3Q96NS8 147 aa9.91□□□□□ -0.82
LINC00563-201ENST00000566370 DUX3Q96PT4 197 aa9.91□□□□□ -0.82
LINC00563-201ENST00000566370 JMJD8Q96S16 334 aa9.91□□□□□ -0.82
LINC00563-201ENST00000566370 C16orf95Q9H693 158 aa9.91□□□□□ -0.82
LINC00563-201ENST00000566370 TMEM160Q9NX00 188 aa9.91□□□□□ -0.82
LINC00563-201ENST00000566370 TSSC4Q9Y5U2 329 aaPredicted RBP9.91□□□□□ -0.82
LINC00563-201ENST00000566370 A0A087WWL8 130 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 KNCNA6PVL3 124 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 INSP01308 110 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms