RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 C7orf71A4D174 169 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 TEX46H3BTG2 121 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 ZNF324O75467 553 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-215ENST00000565559 IFNA7P01567 189 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 NKX2-5P52952 324 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-215ENST00000565559 UBE2G2P60604 165 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 GNG5P63218 68 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 ZNF493Q6ZR52 646 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 CYB561D1Q8N8Q1 229 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 HIST1H2BAQ96A08 127 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 C16orf74Q96GX8 76 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 PYGO2Q9BRQ0 406 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 LINC00467Q9BRT7 94 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 TCEAL7Q9BRU2 100 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 RPH3ALQ9UNE2 315 aa7.54□□□□□ -1.2
CAPN3-215ENST00000565559 PLAC8L1A1L4L8 177 aa7.53□□□□□ -1.2
CAPN3-215ENST00000565559 F6UZH7 168 aa7.53□□□□□ -1.2
CAPN3-215ENST00000565559 J3KRW8 73 aa7.53□□□□□ -1.2
CAPN3-215ENST00000565559 RNASE4P34096 147 aaKnown RBP7.53□□□□□ -1.2
CAPN3-215ENST00000565559 CCDC28AQ8IWP9 274 aa7.53□□□□□ -1.2
CAPN3-215ENST00000565559 TMEM75Q8N9X5 138 aa7.53□□□□□ -1.2
CAPN3-215ENST00000565559 Q8TAT8 98 aa7.53□□□□□ -1.2
CAPN3-215ENST00000565559 FAM30AQ9NZY2 134 aa7.53□□□□□ -1.2
CAPN3-215ENST00000565559 TRAV8-1A0A0A6YYK1 113 aa7.52□□□□□ -1.21
CAPN3-215ENST00000565559 PAGE4O60829 102 aa7.52□□□□□ -1.21
CAPN3-215ENST00000565559 NXPH4O95158 308 aa7.52□□□□□ -1.21
CAPN3-215ENST00000565559 IGLV2-11P01706 119 aa7.52□□□□□ -1.21
CAPN3-215ENST00000565559 AZU1P20160 251 aa7.52□□□□□ -1.21
CAPN3-215ENST00000565559 FLI1Q01543 452 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-215ENST00000565559 CST9LP1Q5W188 147 aa7.52□□□□□ -1.21
CAPN3-215ENST00000565559 TMEM263Q8WUH6 116 aaKnown RBP7.52□□□□□ -1.21
CAPN3-215ENST00000565559 TXNDC17Q9BRA2 123 aa7.52□□□□□ -1.21
CAPN3-215ENST00000565559 NDFIP1Q9BT67 221 aa7.52□□□□□ -1.21
CAPN3-215ENST00000565559 NOP10Q9NPE3 64 aaKnown RBP7.52□□□□□ -1.21
CAPN3-215ENST00000565559 MSRB1Q9NZV6 116 aa7.52□□□□□ -1.21
CAPN3-215ENST00000565559 A0A1B0GV50 99 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 PEX7O00628 323 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 HTN1P15515 57 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 ASIPP42127 132 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 BLOC1S1P78537 153 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 BTN1A1Q13410 526 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 SAPCD1Q5SSQ6 148 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 PRR9Q5T870 116 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 Q6AWC8 147 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 ALKAL2Q6UX46 152 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 TREM1Q9NP99 234 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 MANBALQ9NQG1 85 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 PSG8Q9UQ74 426 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 KLF12Q9Y4X4 402 aa7.51□□□□□ -1.21
CAPN3-215ENST00000565559 TRBV6-1A0A0K0K1D8 114 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 K7EP13 123 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 RS1O15537 224 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 PSCAO43653 123 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 CCL20P78556 96 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 ANXA2RQ3ZCQ2 193 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 EIF4E3Q8N5X7 224 aaKnown RBP7.5□□□□□ -1.21
CAPN3-215ENST00000565559 RNASE8Q8TDE3 154 aaKnown RBP7.5□□□□□ -1.21
CAPN3-215ENST00000565559 SGK494Q96LW2 274 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 LY96Q9Y6Y9 160 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
CAPN3-215ENST00000565559 DNAH8Q96JB1 4490 aa7.49□□□□□ -1.21
CAPN3-215ENST00000565559 IGHV1OR15-1A0A075B7D0 117 aa7.49□□□□□ -1.21
CAPN3-215ENST00000565559 A0A096LPF7 62 aa7.49□□□□□ -1.21
CAPN3-215ENST00000565559 S100A9P06702 114 aaKnown RBP7.49□□□□□ -1.21
CAPN3-215ENST00000565559 TAGLN2P37802 199 aaKnown RBP7.49□□□□□ -1.21
CAPN3-215ENST00000565559 RNF151Q2KHN1 245 aa7.49□□□□□ -1.21
CAPN3-215ENST00000565559 PRNTQ86SH4 94 aa7.49□□□□□ -1.21
CAPN3-215ENST00000565559 ZNF680Q8NEM1 530 aa7.49□□□□□ -1.21
CAPN3-215ENST00000565559 FMC1Q96HJ9 113 aa7.49□□□□□ -1.21
CAPN3-215ENST00000565559 LINC00479Q96M42 142 aa7.49□□□□□ -1.21
CAPN3-215ENST00000565559 ZFP30Q9Y2G7 519 aa7.49□□□□□ -1.21
CAPN3-215ENST00000565559 TRAV34A0A0B4J273 112 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 TRAV21A0A0B4J279 112 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 SNURFLB1AK76 121 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 IFNA1P01562 189 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 UBE2G1P62253 170 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 TMEM183BQ1AE95 376 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 TDRG1Q3Y452 100 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 SMUG1Q53HV7 270 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 IBA57Q5T440 356 aaKnown RBP7.48□□□□□ -1.21
CAPN3-215ENST00000565559 COX8CQ7Z4L0 72 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 LYPD6BQ8NI32 183 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 GNG13Q9P2W3 67 aa7.48□□□□□ -1.21
CAPN3-215ENST00000565559 GAGE12BA1L429 117 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 GAGE7O76087 117 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 GAGE12FP0CL80 117 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 GAGE12GP0CL81 117 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 GAGE12IP0CL82 117 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 EVI2AP22794 236 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 AKR1C3P42330 323 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 DAZ2Q13117 558 aaKnown RBP7.47□□□□□ -1.21
CAPN3-215ENST00000565559 FAM159AQ6UWV7 190 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 Q6ZQT7 251 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 Q86TA4 180 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 Q8N814 137 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 C11orf72Q8NBR9 251 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 C11orf52Q96A22 123 aa7.47□□□□□ -1.21
CAPN3-215ENST00000565559 KCNS1Q96KK3 526 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms